RNA–Protein interactions for RNA: ENST00000450584.5

LDHB-204, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 732 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-204ENST00000450584 NISCHQ9Y2I1 1504 aa23.66■■□□□ 1.38
LDHB-204ENST00000450584 ABCC9O60706 1549 aa22.47■■□□□ 1.19
LDHB-204ENST00000450584 DNAJC5BQ9UF47 199 aa21.92■■□□□ 1.1
LDHB-204ENST00000450584 CCDC180Q9P1Z9 1646 aa21.58■■□□□ 1.04
LDHB-204ENST00000450584 RB1CC1Q8TDY2 1594 aa20.93■□□□□ 0.94
LDHB-204ENST00000450584 PABPN1Q86U42 306 aaKnown RBP eCLIP20.78■□□□□ 0.92
LDHB-204ENST00000450584 DNAJC5Q9H3Z4 198 aa20.64■□□□□ 0.89
LDHB-204ENST00000450584 NACADO15069 1562 aa20.58■□□□□ 0.88
LDHB-204ENST00000450584 UNC13AQ9UPW8 1703 aa20.58■□□□□ 0.88
LDHB-204ENST00000450584 BICRAQ9NZM4 1560 aa20.49■□□□□ 0.87
LDHB-204ENST00000450584 CECR2Q9BXF3 1484 aa20.3■□□□□ 0.84
LDHB-204ENST00000450584 CC2D2AQ9P2K1 1620 aa20.25■□□□□ 0.83
LDHB-204ENST00000450584 DCAF8L2P0C7V8 631 aa20.25■□□□□ 0.83
LDHB-204ENST00000450584 AEBP2Q6ZN18 517 aaPredicted RBP20.11■□□□□ 0.81
LDHB-204ENST00000450584 MYO15BQ96JP2 1530 aa20■□□□□ 0.79
LDHB-204ENST00000450584 EIF4G1Q04637 1599 aaKnown RBP20■□□□□ 0.79
LDHB-204ENST00000450584 SHROOM4Q9ULL8 1493 aa19.96■□□□□ 0.79
LDHB-204ENST00000450584 SCRIBQ14160 1630 aa19.67■□□□□ 0.74
LDHB-204ENST00000450584 CUX2O14529 1486 aa19.65■□□□□ 0.74
LDHB-204ENST00000450584 DCAF1Q9Y4B6 1507 aa19.45■□□□□ 0.7
LDHB-204ENST00000450584 ZCCHC6Q5VYS8 1495 aaKnown RBP19.44■□□□□ 0.7
LDHB-204ENST00000450584 ERCC6Q03468 1493 aa19.38■□□□□ 0.69
LDHB-204ENST00000450584 TRIM41Q8WV44 630 aa19.38■□□□□ 0.69
LDHB-204ENST00000450584 NESP48681 1621 aa19.11■□□□□ 0.65
LDHB-204ENST00000450584 THOC2Q8NI27 1593 aaKnown RBP19.07■□□□□ 0.64
LDHB-204ENST00000450584 NCAPD3P42695 1498 aa19.03■□□□□ 0.64
LDHB-204ENST00000450584 CHIC1Q5VXU3 224 aa18.97■□□□□ 0.63
LDHB-204ENST00000450584 ATAD2BQ9ULI0 1458 aa18.89■□□□□ 0.61
LDHB-204ENST00000450584 SMARCA2P51531 1590 aa18.87■□□□□ 0.61
LDHB-204ENST00000450584 HMGXB3Q12766 1538 aa18.81■□□□□ 0.6
LDHB-204ENST00000450584 KIF21AQ7Z4S6 1674 aa18.8■□□□□ 0.6
LDHB-204ENST00000450584 LAMC3Q9Y6N6 1575 aa18.72■□□□□ 0.59
LDHB-204ENST00000450584 BAZ1AQ9NRL2 1556 aaPredicted RBP18.7■□□□□ 0.58
LDHB-204ENST00000450584 SMARCA4P51532 1647 aa18.65■□□□□ 0.58
LDHB-204ENST00000450584 BAZ1BQ9UIG0 1483 aaKnown RBP18.61■□□□□ 0.57
LDHB-204ENST00000450584 PDS5BQ9NTI5 1447 aa18.6■□□□□ 0.57
LDHB-204ENST00000450584 WDR62O43379 1518 aa18.58■□□□□ 0.56
LDHB-204ENST00000450584 MRC2Q9UBG0 1479 aa18.56■□□□□ 0.56
LDHB-204ENST00000450584 OSCARQ8IYS5 282 aa18.55■□□□□ 0.56
LDHB-204ENST00000450584 RIMBP3CA6NJZ7 1639 aa18.54■□□□□ 0.56
LDHB-204ENST00000450584 RIMBP3BA6NNM3 1639 aa18.54■□□□□ 0.56
LDHB-204ENST00000450584 RIMBP3Q9UFD9 1639 aa18.54■□□□□ 0.56
LDHB-204ENST00000450584 PEG3Q9GZU2 1588 aa18.47■□□□□ 0.55
LDHB-204ENST00000450584 CADPSQ9ULU8 1353 aa18.4■□□□□ 0.54
LDHB-204ENST00000450584 ARHGEF11O15085 1522 aa18.38■□□□□ 0.53
LDHB-204ENST00000450584 CEP164Q9UPV0 1460 aa18.29■□□□□ 0.52
LDHB-204ENST00000450584 MROH2BQ7Z745 1585 aa18.27■□□□□ 0.52
LDHB-204ENST00000450584 TRHP20396 242 aaPredicted RBP18.26■□□□□ 0.51
LDHB-204ENST00000450584 CYB5RLQ6IPT4 315 aa18.23■□□□□ 0.51
LDHB-204ENST00000450584 FANCD2Q9BXW9 1451 aa18.22■□□□□ 0.51
LDHB-204ENST00000450584 URB2Q14146 1524 aaKnown RBP18.18■□□□□ 0.5
LDHB-204ENST00000450584 ARAP1Q96P48 1450 aa18.17■□□□□ 0.5
LDHB-204ENST00000450584 ZNF608Q9ULD9 1512 aaPredicted RBP18.12■□□□□ 0.49
LDHB-204ENST00000450584 CFTRP13569 1480 aa18.04■□□□□ 0.48
LDHB-204ENST00000450584 WIZO95785 1651 aa18.01■□□□□ 0.47
LDHB-204ENST00000450584 CHD1O14646 1710 aa17.98■□□□□ 0.47
LDHB-204ENST00000450584 IFT140Q96RY7 1462 aa17.95■□□□□ 0.46
LDHB-204ENST00000450584 EIF4G3O43432 1585 aaKnown RBP17.94■□□□□ 0.46
LDHB-204ENST00000450584 RSF1Q96T23 1441 aaPredicted RBP17.92■□□□□ 0.46
LDHB-204ENST00000450584 ILDR1Q86SU0 546 aaPredicted RBP17.8■□□□□ 0.44
LDHB-204ENST00000450584 AQRO60306 1485 aaKnown RBP eCLIP17.8■□□□□ 0.44
LDHB-204ENST00000450584 TOPBP1Q92547 1522 aa17.79■□□□□ 0.44
LDHB-204ENST00000450584 PRDM2Q13029 1718 aa17.78■□□□□ 0.44
LDHB-204ENST00000450584 FBLN2P98095 1184 aa17.76■□□□□ 0.43
LDHB-204ENST00000450584 CLASP1Q7Z460 1538 aa17.75■□□□□ 0.43
LDHB-204ENST00000450584 TARBP1Q13395 1621 aaKnown RBP17.73■□□□□ 0.43
LDHB-204ENST00000450584 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
LDHB-204ENST00000450584 DNMBPQ6XZF7 1577 aa17.63■□□□□ 0.41
LDHB-204ENST00000450584 SNAPC4Q5SXM2 1469 aa17.59■□□□□ 0.41
LDHB-204ENST00000450584 GAPVD1Q14C86 1478 aa17.58■□□□□ 0.41
LDHB-204ENST00000450584 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
LDHB-204ENST00000450584 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
LDHB-204ENST00000450584 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
LDHB-204ENST00000450584 RAD54L2Q9Y4B4 1467 aa17.54■□□□□ 0.4
LDHB-204ENST00000450584 TDRD9Q8NDG6 1382 aaKnown RBP17.53■□□□□ 0.4
LDHB-204ENST00000450584 CCDC88BA6NC98 1476 aa17.49■□□□□ 0.39
LDHB-204ENST00000450584 KDM4FA0A1W2PPD8 638 aa17.48■□□□□ 0.39
LDHB-204ENST00000450584 KIF13AQ9H1H9 1805 aa17.48■□□□□ 0.39
LDHB-204ENST00000450584 ERCC6L2Q5T890 1561 aa17.48■□□□□ 0.39
LDHB-204ENST00000450584 CHMP7Q8WUX9 453 aaPredicted RBP17.46■□□□□ 0.39
LDHB-204ENST00000450584 MAGI1Q96QZ7 1491 aaPredicted RBP17.44■□□□□ 0.38
LDHB-204ENST00000450584 SYNJ2O15056 1496 aa17.42■□□□□ 0.38
LDHB-204ENST00000450584 SOGA1O94964 1423 aa17.41■□□□□ 0.38
LDHB-204ENST00000450584 WDR97A6NE52 1622 aa17.38■□□□□ 0.37
LDHB-204ENST00000450584 GRIN2BQ13224 1484 aa17.36■□□□□ 0.37
LDHB-204ENST00000450584 FGD5Q6ZNL6 1462 aa17.33■□□□□ 0.37
LDHB-204ENST00000450584 PBRM1Q86U86 1689 aa17.29■□□□□ 0.36
LDHB-204ENST00000450584 CEP170Q5SW79 1584 aa17.28■□□□□ 0.36
LDHB-204ENST00000450584 KDM6BO15054 1643 aa17.21■□□□□ 0.35
LDHB-204ENST00000450584 ABCC10Q5T3U5 1492 aa17.21■□□□□ 0.35
LDHB-204ENST00000450584 CUX1P39880 1505 aa17.21■□□□□ 0.34
LDHB-204ENST00000450584 SHROOM2Q13796 1616 aa17.2■□□□□ 0.34
LDHB-204ENST00000450584 FAM69CQ0P6D2 419 aa17.19■□□□□ 0.34
LDHB-204ENST00000450584 DIP2BQ9P265 1576 aa17.18■□□□□ 0.34
LDHB-204ENST00000450584 HECW2Q9P2P5 1572 aa17.18■□□□□ 0.34
LDHB-204ENST00000450584 GRIN2AQ12879 1464 aa17.18■□□□□ 0.34
LDHB-204ENST00000450584 NUP160Q12769 1436 aa17.16■□□□□ 0.34
LDHB-204ENST00000450584 ABCA5Q8WWZ7 1642 aa17.16■□□□□ 0.34
LDHB-204ENST00000450584 ADGRL1O94910 1474 aa17.12■□□□□ 0.33
LDHB-204ENST00000450584 MAPKBP1O60336 1514 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms