RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 ST20-MTHFSA0A0A6YYL1 179 aa14.63□□□□□ -0.07
ZNF550-204ENST00000447310 NUP155O75694 1391 aa14.63□□□□□ -0.07
ZNF550-204ENST00000447310 PDE4AP27815 886 aa14.62□□□□□ -0.07
ZNF550-204ENST00000447310 TMF1P82094 1093 aa14.61□□□□□ -0.07
ZNF550-204ENST00000447310 NLRP13Q86W25 1043 aa14.61□□□□□ -0.07
ZNF550-204ENST00000447310 FRAT1Q92837 279 aaPredicted RBP14.61□□□□□ -0.07
ZNF550-204ENST00000447310 TIAM1Q13009 1591 aa14.61□□□□□ -0.07
ZNF550-204ENST00000447310 MYOM3Q5VTT5 1437 aa14.61□□□□□ -0.07
ZNF550-204ENST00000447310 PAK3O75914 559 aaPredicted RBP14.61□□□□□ -0.07
ZNF550-204ENST00000447310 PLIN1O60240 522 aa14.6□□□□□ -0.07
ZNF550-204ENST00000447310 CUX1P39880 1505 aa14.6□□□□□ -0.07
ZNF550-204ENST00000447310 RRP1P56182 461 aaKnown RBP14.59□□□□□ -0.07
ZNF550-204ENST00000447310 CDCA8Q53HL2 280 aa14.59□□□□□ -0.07
ZNF550-204ENST00000447310 ROCK2O75116 1388 aaKnown RBP14.59□□□□□ -0.07
ZNF550-204ENST00000447310 USP47Q96K76 1375 aa14.59□□□□□ -0.07
ZNF550-204ENST00000447310 RAD54L2Q9Y4B4 1467 aa14.59□□□□□ -0.07
ZNF550-204ENST00000447310 CASKIN1Q8WXD9 1431 aa14.58□□□□□ -0.08
ZNF550-204ENST00000447310 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.58□□□□□ -0.08
ZNF550-204ENST00000447310 ANP32BQ92688 251 aaKnown RBP14.57□□□□□ -0.08
ZNF550-204ENST00000447310 MYBBP1AQ9BQG0 1328 aaKnown RBP14.57□□□□□ -0.08
ZNF550-204ENST00000447310 SLC4A3P48751 1232 aa14.57□□□□□ -0.08
ZNF550-204ENST00000447310 PDE3BQ13370 1112 aa14.57□□□□□ -0.08
ZNF550-204ENST00000447310 KIF15Q9NS87 1388 aa14.56□□□□□ -0.08
ZNF550-204ENST00000447310 FANCD2Q9BXW9 1451 aa14.56□□□□□ -0.08
ZNF550-204ENST00000447310 ZNF644Q9H582 1327 aaPredicted RBP14.56□□□□□ -0.08
ZNF550-204ENST00000447310 NCAPD3P42695 1498 aa14.56□□□□□ -0.08
ZNF550-204ENST00000447310 NBPF8Q3BBV2 869 aa14.55□□□□□ -0.08
ZNF550-204ENST00000447310 NCOA2Q15596 1464 aa14.55□□□□□ -0.08
ZNF550-204ENST00000447310 TNNT2P45379 298 aaPredicted RBP14.55□□□□□ -0.08
ZNF550-204ENST00000447310 ANKRD30AQ9BXX3 1397 aa14.55□□□□□ -0.08
ZNF550-204ENST00000447310 AKNAQ7Z591 1439 aa14.54□□□□□ -0.08
ZNF550-204ENST00000447310 HFM1A2PYH4 1435 aa14.54□□□□□ -0.08
ZNF550-204ENST00000447310 CFTRP13569 1480 aa14.53□□□□□ -0.08
ZNF550-204ENST00000447310 SENP3Q9H4L4 574 aaPredicted RBP14.52□□□□□ -0.08
ZNF550-204ENST00000447310 GLIPR1L2Q4G1C9 344 aa14.52□□□□□ -0.08
ZNF550-204ENST00000447310 USP35Q9P2H5 1018 aa14.52□□□□□ -0.09
ZNF550-204ENST00000447310 C11orf95C9JLR9 678 aaPredicted RBP14.52□□□□□ -0.09
ZNF550-204ENST00000447310 FYCO1Q9BQS8 1478 aa14.51□□□□□ -0.09
ZNF550-204ENST00000447310 MAPKBP1O60336 1514 aa14.51□□□□□ -0.09
ZNF550-204ENST00000447310 CRBNQ96SW2 442 aa14.51□□□□□ -0.09
ZNF550-204ENST00000447310 SLKQ9H2G2 1235 aaPredicted RBP14.5□□□□□ -0.09
ZNF550-204ENST00000447310 FTSJ3Q8IY81 847 aaKnown RBP14.49□□□□□ -0.09
ZNF550-204ENST00000447310 SPRYD3Q8NCJ5 442 aa14.49□□□□□ -0.09
ZNF550-204ENST00000447310 HNRNPMP52272 730 aaKnown RBP eCLIP14.49□□□□□ -0.09
ZNF550-204ENST00000447310 NAIPQ13075 1403 aa14.48□□□□□ -0.09
ZNF550-204ENST00000447310 GOLGA2Q08379 1002 aa14.48□□□□□ -0.09
ZNF550-204ENST00000447310 PANK3Q9H999 370 aa14.48□□□□□ -0.09
ZNF550-204ENST00000447310 MS4A1P11836 297 aa14.47□□□□□ -0.09
ZNF550-204ENST00000447310 TRIM44Q96DX7 344 aaPredicted RBP14.46□□□□□ -0.09
ZNF550-204ENST00000447310 CCDC146Q8IYE0 955 aa14.46□□□□□ -0.09
ZNF550-204ENST00000447310 CFAP53Q96M91 514 aa14.46□□□□□ -0.09
ZNF550-204ENST00000447310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.46□□□□□ -0.09
ZNF550-204ENST00000447310 PDS5BQ9NTI5 1447 aa14.45□□□□□ -0.1
ZNF550-204ENST00000447310 SLC24A1O60721 1099 aa14.45□□□□□ -0.1
ZNF550-204ENST00000447310 GSE1Q14687 1217 aa14.45□□□□□ -0.1
ZNF550-204ENST00000447310 CDCA7LQ96GN5 454 aa14.45□□□□□ -0.1
ZNF550-204ENST00000447310 PNISRQ8TF01 805 aaKnown RBP14.45□□□□□ -0.1
ZNF550-204ENST00000447310 NAP1L5Q96NT1 182 aaPredicted RBP14.44□□□□□ -0.1
ZNF550-204ENST00000447310 FAM161AQ3B820 660 aa14.42□□□□□ -0.1
ZNF550-204ENST00000447310 CENPQQ7L2Z9 268 aaPredicted RBP14.42□□□□□ -0.1
ZNF550-204ENST00000447310 GAPVD1Q14C86 1478 aa14.42□□□□□ -0.1
ZNF550-204ENST00000447310 BICRAQ9NZM4 1560 aa14.41□□□□□ -0.1
ZNF550-204ENST00000447310 GZF1Q9H116 711 aaPredicted RBP14.41□□□□□ -0.1
ZNF550-204ENST00000447310 MAP3K1Q13233 1512 aa14.41□□□□□ -0.1
ZNF550-204ENST00000447310 PCF11O94913 1555 aaKnown RBP14.4□□□□□ -0.1
ZNF550-204ENST00000447310 SMG6Q86US8 1419 aaKnown RBP14.4□□□□□ -0.1
ZNF550-204ENST00000447310 IL27Q8NEV9 243 aa14.4□□□□□ -0.1
ZNF550-204ENST00000447310 ARID4BQ4LE39 1312 aaPredicted RBP14.4□□□□□ -0.1
ZNF550-204ENST00000447310 L1TD1Q5T7N2 865 aaKnown RBP14.38□□□□□ -0.11
ZNF550-204ENST00000447310 PLPPR3Q6T4P5 718 aa14.38□□□□□ -0.11
ZNF550-204ENST00000447310 MORC1Q86VD1 984 aa14.38□□□□□ -0.11
ZNF550-204ENST00000447310 CLUAP1Q96AJ1 413 aa14.38□□□□□ -0.11
ZNF550-204ENST00000447310 U2SURPO15042 1029 aaKnown RBP14.37□□□□□ -0.11
ZNF550-204ENST00000447310 MYH16Q9H6N6 1097 aa14.37□□□□□ -0.11
ZNF550-204ENST00000447310 STAG3Q9UJ98 1225 aa14.37□□□□□ -0.11
ZNF550-204ENST00000447310 EFCAB5A4FU69 1503 aa14.37□□□□□ -0.11
ZNF550-204ENST00000447310 PEG3Q9GZU2 1588 aa14.37□□□□□ -0.11
ZNF550-204ENST00000447310 BRD4O60885 1362 aaPredicted RBP14.37□□□□□ -0.11
ZNF550-204ENST00000447310 NCLP19338 710 aaKnown RBP14.37□□□□□ -0.11
ZNF550-204ENST00000447310 NFKBIBQ15653 356 aa14.37□□□□□ -0.11
ZNF550-204ENST00000447310 GOLGA6L22H0YM25 854 aa14.37□□□□□ -0.11
ZNF550-204ENST00000447310 BACH2Q9BYV9 841 aa14.36□□□□□ -0.11
ZNF550-204ENST00000447310 CCDC144AA2RUR9 1427 aa14.36□□□□□ -0.11
ZNF550-204ENST00000447310 CARMIL2Q6F5E8 1435 aa14.36□□□□□ -0.11
ZNF550-204ENST00000447310 MAPK8IP3Q9UPT6 1336 aa14.35□□□□□ -0.11
ZNF550-204ENST00000447310 ANO8Q9HCE9 1232 aaPredicted RBP14.34□□□□□ -0.11
ZNF550-204ENST00000447310 APAF1O14727 1248 aa14.34□□□□□ -0.11
ZNF550-204ENST00000447310 HSCBQ8IWL3 235 aa14.34□□□□□ -0.11
ZNF550-204ENST00000447310 HSP90AB1P08238 724 aaKnown RBP14.34□□□□□ -0.11
ZNF550-204ENST00000447310 JPH4Q96JJ6 628 aa14.34□□□□□ -0.11
ZNF550-204ENST00000447310 CENPJQ9HC77 1338 aaPredicted RBP14.33□□□□□ -0.12
ZNF550-204ENST00000447310 PTPRKQ15262 1439 aa14.32□□□□□ -0.12
ZNF550-204ENST00000447310 BIVM-ERCC5R4GMW8 1640 aa14.32□□□□□ -0.12
ZNF550-204ENST00000447310 ADAMTS8Q9UP79 889 aa14.32□□□□□ -0.12
ZNF550-204ENST00000447310 RWDD1Q9H446 243 aaPredicted RBP14.32□□□□□ -0.12
ZNF550-204ENST00000447310 COG6Q9Y2V7 657 aa14.32□□□□□ -0.12
ZNF550-204ENST00000447310 HMGXB3Q12766 1538 aa14.32□□□□□ -0.12
ZNF550-204ENST00000447310 ANKRD50Q9ULJ7 1429 aa14.31□□□□□ -0.12
ZNF550-204ENST00000447310 NCOA1Q15788 1441 aa14.31□□□□□ -0.12
ZNF550-204ENST00000447310 BCL2L13Q9BXK5 485 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms