RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 NISCHQ9Y2I1 1504 aa20.17■□□□□ 0.82
ZNF550-204ENST00000447310 SUPT5HO00267 1087 aaKnown RBP19.01■□□□□ 0.63
ZNF550-204ENST00000447310 DCAF8L2P0C7V8 631 aa19■□□□□ 0.63
ZNF550-204ENST00000447310 SHROOM4Q9ULL8 1493 aa18.86■□□□□ 0.61
ZNF550-204ENST00000447310 PCGF6Q9BYE7 350 aa18.26■□□□□ 0.51
ZNF550-204ENST00000447310 EHMT2Q96KQ7 1210 aa17.99■□□□□ 0.47
ZNF550-204ENST00000447310 HRCP23327 699 aa17.89■□□□□ 0.46
ZNF550-204ENST00000447310 FAM9AQ8IZU1 332 aaPredicted RBP17.77■□□□□ 0.44
ZNF550-204ENST00000447310 CHIC1Q5VXU3 224 aa17.74■□□□□ 0.43
ZNF550-204ENST00000447310 PPARGC1BQ86YN6 1023 aaKnown RBP17.65■□□□□ 0.42
ZNF550-204ENST00000447310 LOC105371045A0A1W2PR82 267 aa17.59■□□□□ 0.41
ZNF550-204ENST00000447310 ZEB1P37275 1124 aaPredicted RBP17.55■□□□□ 0.4
ZNF550-204ENST00000447310 TRIM41Q8WV44 630 aa17.53■□□□□ 0.4
ZNF550-204ENST00000447310 TRIM26Q12899 539 aaPredicted RBP17.5■□□□□ 0.39
ZNF550-204ENST00000447310 TTBK1Q5TCY1 1321 aaPredicted RBP17.44■□□□□ 0.38
ZNF550-204ENST00000447310 PELP1Q8IZL8 1130 aaKnown RBP17.36■□□□□ 0.37
ZNF550-204ENST00000447310 CCER1Q8TC90 406 aaPredicted RBP17.35■□□□□ 0.37
ZNF550-204ENST00000447310 CENPBP07199 599 aaPredicted RBP17.25■□□□□ 0.35
ZNF550-204ENST00000447310 APLP2Q06481 763 aa17.1■□□□□ 0.33
ZNF550-204ENST00000447310 YTHDC1Q96MU7 727 aaKnown RBP17.03■□□□□ 0.32
ZNF550-204ENST00000447310 MYO15BQ96JP2 1530 aa17■□□□□ 0.31
ZNF550-204ENST00000447310 UBTFP17480 764 aaKnown RBP16.99■□□□□ 0.31
ZNF550-204ENST00000447310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.97■□□□□ 0.31
ZNF550-204ENST00000447310 RANGAP1P46060 587 aaPredicted RBP16.96■□□□□ 0.31
ZNF550-204ENST00000447310 ZCCHC6Q5VYS8 1495 aaKnown RBP16.9■□□□□ 0.3
ZNF550-204ENST00000447310 DCAF1Q9Y4B6 1507 aa16.85■□□□□ 0.29
ZNF550-204ENST00000447310 DIEXFQ68CQ4 756 aaKnown RBP16.83■□□□□ 0.28
ZNF550-204ENST00000447310 MYT1Q01538 1121 aa16.77■□□□□ 0.28
ZNF550-204ENST00000447310 GTF3C3Q9Y5Q9 886 aa16.72■□□□□ 0.27
ZNF550-204ENST00000447310 HNRNPUL2Q1KMD3 747 aaKnown RBP16.71■□□□□ 0.26
ZNF550-204ENST00000447310 ACIN1Q9UKV3 1341 aaKnown RBP16.64■□□□□ 0.25
ZNF550-204ENST00000447310 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
ZNF550-204ENST00000447310 NEUROD1Q13562 356 aa16.49■□□□□ 0.23
ZNF550-204ENST00000447310 ZNF316A6NFI3 1004 aaPredicted RBP16.46■□□□□ 0.23
ZNF550-204ENST00000447310 ATP1B4Q9UN42 357 aaPredicted RBP16.46■□□□□ 0.23
ZNF550-204ENST00000447310 ITGAEP38570 1179 aa16.45■□□□□ 0.22
ZNF550-204ENST00000447310 CCDC180Q9P1Z9 1646 aa16.43■□□□□ 0.22
ZNF550-204ENST00000447310 NEFLP07196 543 aa16.41■□□□□ 0.22
ZNF550-204ENST00000447310 ERICH6Q7L0X2 663 aa16.34■□□□□ 0.21
ZNF550-204ENST00000447310 ABCC9O60706 1549 aa16.34■□□□□ 0.21
ZNF550-204ENST00000447310 SCRIBQ14160 1630 aa16.32■□□□□ 0.2
ZNF550-204ENST00000447310 CSRNP3Q8WYN3 585 aa16.3■□□□□ 0.2
ZNF550-204ENST00000447310 RSF1Q96T23 1441 aaPredicted RBP16.29■□□□□ 0.2
ZNF550-204ENST00000447310 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.18
ZNF550-204ENST00000447310 BCANQ96GW7 911 aa16.16■□□□□ 0.18
ZNF550-204ENST00000447310 MIER1Q8N108 512 aa16.15■□□□□ 0.18
ZNF550-204ENST00000447310 FAM50AQ14320 339 aaKnown RBP16.03■□□□□ 0.16
ZNF550-204ENST00000447310 CEP162Q5TB80 1403 aa16■□□□□ 0.15
ZNF550-204ENST00000447310 RB1CC1Q8TDY2 1594 aa15.96■□□□□ 0.15
ZNF550-204ENST00000447310 CNGB1Q14028 1251 aaPredicted RBP15.93■□□□□ 0.14
ZNF550-204ENST00000447310 CECR2Q9BXF3 1484 aa15.92■□□□□ 0.14
ZNF550-204ENST00000447310 ANP32CO43423 234 aa15.9■□□□□ 0.14
ZNF550-204ENST00000447310 POLR3GLQ9BT43 218 aa15.88■□□□□ 0.13
ZNF550-204ENST00000447310 CLSPNQ9HAW4 1339 aa15.87■□□□□ 0.13
ZNF550-204ENST00000447310 FKBP8Q14318 412 aa15.87■□□□□ 0.13
ZNF550-204ENST00000447310 TNIKQ9UKE5 1360 aa15.86■□□□□ 0.13
ZNF550-204ENST00000447310 CLIP1P30622 1438 aa15.85■□□□□ 0.13
ZNF550-204ENST00000447310 DDX10Q13206 875 aaKnown RBP15.84■□□□□ 0.13
ZNF550-204ENST00000447310 P3H3Q8IVL6 736 aa15.79■□□□□ 0.12
ZNF550-204ENST00000447310 GOLGA3Q08378 1498 aa15.79■□□□□ 0.12
ZNF550-204ENST00000447310 EEA1Q15075 1411 aa15.78■□□□□ 0.12
ZNF550-204ENST00000447310 SOGA1O94964 1423 aa15.78■□□□□ 0.12
ZNF550-204ENST00000447310 CDK11AQ9UQ88 783 aaPredicted RBP15.76■□□□□ 0.11
ZNF550-204ENST00000447310 MROH2BQ7Z745 1585 aa15.75■□□□□ 0.11
ZNF550-204ENST00000447310 TRIM52Q96A61 297 aa15.75■□□□□ 0.11
ZNF550-204ENST00000447310 HIRIP3Q9BW71 556 aaPredicted RBP15.7■□□□□ 0.1
ZNF550-204ENST00000447310 WRNQ14191 1432 aaPredicted RBP eCLIP15.69■□□□□ 0.1
ZNF550-204ENST00000447310 CCDC88BA6NC98 1476 aa15.69■□□□□ 0.1
ZNF550-204ENST00000447310 SUPT16HQ9Y5B9 1047 aaKnown RBP15.69■□□□□ 0.1
ZNF550-204ENST00000447310 ABCC8Q09428 1581 aa15.67■□□□□ 0.1
ZNF550-204ENST00000447310 HNRNPUQ00839 825 aaKnown RBP eCLIP15.64■□□□□ 0.09
ZNF550-204ENST00000447310 NACADO15069 1562 aa15.64■□□□□ 0.09
ZNF550-204ENST00000447310 CEP164Q9UPV0 1460 aa15.63■□□□□ 0.09
ZNF550-204ENST00000447310 BAZ1AQ9NRL2 1556 aaPredicted RBP15.61■□□□□ 0.09
ZNF550-204ENST00000447310 RTL5Q5HYW3 569 aaPredicted RBP15.6■□□□□ 0.09
ZNF550-204ENST00000447310 TONSLQ96HA7 1378 aa15.6■□□□□ 0.09
ZNF550-204ENST00000447310 ANP32EQ9BTT0 268 aa15.58■□□□□ 0.09
ZNF550-204ENST00000447310 WIZO95785 1651 aa15.57■□□□□ 0.08
ZNF550-204ENST00000447310 IRX6P78412 446 aaPredicted RBP15.56■□□□□ 0.08
ZNF550-204ENST00000447310 ZNF326Q5BKZ1 582 aaKnown RBP15.55■□□□□ 0.08
ZNF550-204ENST00000447310 DAXXQ9UER7 740 aaPredicted RBP15.54■□□□□ 0.08
ZNF550-204ENST00000447310 SIN3AQ96ST3 1273 aa15.51■□□□□ 0.07
ZNF550-204ENST00000447310 VPS8Q8N3P4 1428 aa15.51■□□□□ 0.07
ZNF550-204ENST00000447310 FAM9BQ8IZU0 186 aa15.5■□□□□ 0.07
ZNF550-204ENST00000447310 ARID3CA6NKF2 412 aa15.49■□□□□ 0.07
ZNF550-204ENST00000447310 KANK4Q5T7N3 995 aaPredicted RBP15.48■□□□□ 0.07
ZNF550-204ENST00000447310 RUSC2Q8N2Y8 1516 aa15.47■□□□□ 0.07
ZNF550-204ENST00000447310 TSHZ2Q9NRE2 1034 aa15.44■□□□□ 0.06
ZNF550-204ENST00000447310 CHIC2Q9UKJ5 165 aa15.43■□□□□ 0.06
ZNF550-204ENST00000447310 CCNB3Q8WWL7 1395 aa15.43■□□□□ 0.06
ZNF550-204ENST00000447310 ANP32AP39687 249 aaKnown RBP15.39■□□□□ 0.05
ZNF550-204ENST00000447310 MRS2Q9HD23 443 aa15.38■□□□□ 0.05
ZNF550-204ENST00000447310 KCNH8Q96L42 1107 aa15.37■□□□□ 0.05
ZNF550-204ENST00000447310 BAZ1BQ9UIG0 1483 aaKnown RBP15.36■□□□□ 0.05
ZNF550-204ENST00000447310 NBR1Q14596 966 aa15.35■□□□□ 0.05
ZNF550-204ENST00000447310 NPM2Q86SE8 214 aaKnown RBP15.35■□□□□ 0.05
ZNF550-204ENST00000447310 KIF27Q86VH2 1401 aa15.35■□□□□ 0.05
ZNF550-204ENST00000447310 TOP2AP11388 1531 aaKnown RBP15.35■□□□□ 0.05
ZNF550-204ENST00000447310 RBM19Q9Y4C8 960 aaKnown RBP15.34■□□□□ 0.05
ZNF550-204ENST00000447310 MTUS2Q5JR59 1369 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms