RNA–Protein interactions for RNA: ENST00000446501.6

BRF1-206, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2 BASIC

Gene BRF1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-206ENST00000446501 ZNF777Q9ULD5 760 aaPredicted RBP22.82■■□□□ 1.24
BRF1-206ENST00000446501 MIA2Q96PC5 1412 aa22.81■■□□□ 1.24
BRF1-206ENST00000446501 JPH4Q96JJ6 628 aa22.79■■□□□ 1.24
BRF1-206ENST00000446501 MSH5O43196 834 aa22.78■■□□□ 1.24
BRF1-206ENST00000446501 CDK11AQ9UQ88 783 aaPredicted RBP22.78■■□□□ 1.24
BRF1-206ENST00000446501 CEP170Q5SW79 1584 aa22.77■■□□□ 1.24
BRF1-206ENST00000446501 ABCC5O15440 1437 aa22.75■■□□□ 1.23
BRF1-206ENST00000446501 DAPK1P53355 1430 aa22.75■■□□□ 1.23
BRF1-206ENST00000446501 RAPGEF6Q8TEU7 1601 aa22.75■■□□□ 1.23
BRF1-206ENST00000446501 SYNJ2O15056 1496 aa22.74■■□□□ 1.23
BRF1-206ENST00000446501 CFDP1Q9UEE9 299 aaPredicted RBP22.74■■□□□ 1.23
BRF1-206ENST00000446501 KDM5BQ9UGL1 1544 aa22.74■■□□□ 1.23
BRF1-206ENST00000446501 MAGI1Q96QZ7 1491 aaPredicted RBP22.74■■□□□ 1.23
BRF1-206ENST00000446501 L3MBTL2Q969R5 705 aa22.72■■□□□ 1.23
BRF1-206ENST00000446501 ANP32CO43423 234 aa22.72■■□□□ 1.23
BRF1-206ENST00000446501 ERICH6Q7L0X2 663 aa22.71■■□□□ 1.23
BRF1-206ENST00000446501 GCC2Q8IWJ2 1684 aa22.7■■□□□ 1.22
BRF1-206ENST00000446501 SLC4A1APQ9BWU0 796 aaKnown RBP22.69■■□□□ 1.22
BRF1-206ENST00000446501 HSPA5P11021 654 aaKnown RBP22.68■■□□□ 1.22
BRF1-206ENST00000446501 AKNAQ7Z591 1439 aa22.68■■□□□ 1.22
BRF1-206ENST00000446501 TROQ12816 1431 aaPredicted RBP22.67■■□□□ 1.22
BRF1-206ENST00000446501 CARMIL2Q6F5E8 1435 aa22.64■■□□□ 1.21
BRF1-206ENST00000446501 IRX6P78412 446 aaPredicted RBP22.63■■□□□ 1.21
BRF1-206ENST00000446501 KIF14Q15058 1648 aa22.62■■□□□ 1.21
BRF1-206ENST00000446501 NUP160Q12769 1436 aa22.62■■□□□ 1.21
BRF1-206ENST00000446501 ROCK1Q13464 1354 aa22.61■■□□□ 1.21
BRF1-206ENST00000446501 WASHC2AQ641Q2 1341 aa22.61■■□□□ 1.21
BRF1-206ENST00000446501 GPATCH8Q9UKJ3 1502 aaKnown RBP22.61■■□□□ 1.21
BRF1-206ENST00000446501 DNMT1P26358 1616 aaKnown RBP22.6■■□□□ 1.21
BRF1-206ENST00000446501 CAMSAP2Q08AD1 1489 aa22.6■■□□□ 1.21
BRF1-206ENST00000446501 NBPF8Q3BBV2 869 aa22.6■■□□□ 1.21
BRF1-206ENST00000446501 PLEKHD1A6NEE1 506 aa22.59■■□□□ 1.21
BRF1-206ENST00000446501 ANKRD30BQ9BXX2 1392 aa22.59■■□□□ 1.21
BRF1-206ENST00000446501 EIF4G2P78344 907 aaKnown RBP eCLIP22.57■■□□□ 1.21e-6■■■■■ 36.9
BRF1-206ENST00000446501 C11orf95C9JLR9 678 aaPredicted RBP22.56■■□□□ 1.2
BRF1-206ENST00000446501 CCER2I3L3R5 266 aa22.55■■□□□ 1.2
BRF1-206ENST00000446501 NCOA1Q15788 1441 aa22.54■■□□□ 1.2
BRF1-206ENST00000446501 ZNF326Q5BKZ1 582 aaKnown RBP22.52■■□□□ 1.2
BRF1-206ENST00000446501 ATP10BO94823 1461 aa22.52■■□□□ 1.2
BRF1-206ENST00000446501 RPRD2Q5VT52 1461 aaKnown RBP22.49■■□□□ 1.19
BRF1-206ENST00000446501 PKD2Q13563 968 aa22.49■■□□□ 1.19
BRF1-206ENST00000446501 HNRNPMP52272 730 aaKnown RBP eCLIP22.49■■□□□ 1.192e-7■■■■■ 35.3
BRF1-206ENST00000446501 PZPP20742 1482 aa22.48■■□□□ 1.19
BRF1-206ENST00000446501 FANCIQ9NVI1 1328 aa22.47■■□□□ 1.19
BRF1-206ENST00000446501 PTPRGP23470 1445 aa22.45■■□□□ 1.18
BRF1-206ENST00000446501 TEX14Q8IWB6 1497 aa22.44■■□□□ 1.18
BRF1-206ENST00000446501 CNGB1Q14028 1251 aaPredicted RBP22.44■■□□□ 1.18
BRF1-206ENST00000446501 ANKRD30AQ9BXX3 1397 aa22.44■■□□□ 1.18
BRF1-206ENST00000446501 CCDC184Q52MB2 194 aa22.44■■□□□ 1.18
BRF1-206ENST00000446501 ABCA8O94911 1581 aa22.43■■□□□ 1.18
BRF1-206ENST00000446501 HNRNPUQ00839 825 aaKnown RBP eCLIP22.42■■□□□ 1.18
BRF1-206ENST00000446501 ANKRD50Q9ULJ7 1429 aa22.42■■□□□ 1.18
BRF1-206ENST00000446501 ITSN2Q9NZM3 1697 aa22.41■■□□□ 1.18
BRF1-206ENST00000446501 TSPY4P0CV99 314 aa22.4■■□□□ 1.18
BRF1-206ENST00000446501 TSPY10P0CW01 314 aa22.4■■□□□ 1.18
BRF1-206ENST00000446501 DEKP35659 375 aaKnown RBP22.4■■□□□ 1.18
BRF1-206ENST00000446501 POLR3GLQ9BT43 218 aa22.4■■□□□ 1.18
BRF1-206ENST00000446501 ABCC10Q5T3U5 1492 aa22.4■■□□□ 1.18
BRF1-206ENST00000446501 NUP155O75694 1391 aa22.39■■□□□ 1.18
BRF1-206ENST00000446501 ADCY10Q96PN6 1610 aa22.38■■□□□ 1.17
BRF1-206ENST00000446501 CCDC7Q96M83 1385 aa22.38■■□□□ 1.17
BRF1-206ENST00000446501 PRKCSHP14314 528 aaPredicted RBP22.38■■□□□ 1.17
BRF1-206ENST00000446501 C9orf84Q5VXU9 1444 aa22.38■■□□□ 1.17
BRF1-206ENST00000446501 KIAA1107Q9UPP5 1409 aa22.36■■□□□ 1.17
BRF1-206ENST00000446501 ADGRL2O95490 1459 aa22.36■■□□□ 1.17
BRF1-206ENST00000446501 CDC42BPAQ5VT25 1732 aa22.35■■□□□ 1.17
BRF1-206ENST00000446501 KIF7Q2M1P5 1343 aa22.34■■□□□ 1.17
BRF1-206ENST00000446501 KDM2AQ9Y2K7 1162 aa22.33■■□□□ 1.17
BRF1-206ENST00000446501 CNTLNQ9NXG0 1405 aa22.33■■□□□ 1.16
BRF1-206ENST00000446501 NBR1Q14596 966 aa22.32■■□□□ 1.16
BRF1-206ENST00000446501 ADGBQ8N7X0 1667 aa22.31■■□□□ 1.16
BRF1-206ENST00000446501 KIF15Q9NS87 1388 aa22.31■■□□□ 1.16
BRF1-206ENST00000446501 CROCC2H7BZ55 1655 aa22.3■■□□□ 1.16
BRF1-206ENST00000446501 SPATA31E1Q6ZUB1 1445 aa22.3■■□□□ 1.16
BRF1-206ENST00000446501 FAM9BQ8IZU0 186 aa22.29■■□□□ 1.16
BRF1-206ENST00000446501 PRKRIP1Q9H875 184 aaPredicted RBP22.29■■□□□ 1.16
BRF1-206ENST00000446501 ERCC6L2Q5T890 1561 aa22.27■■□□□ 1.15
BRF1-206ENST00000446501 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.26■■□□□ 1.154e-6■■□□□ 14.4
BRF1-206ENST00000446501 MBD5Q9P267 1494 aa22.25■■□□□ 1.15
BRF1-206ENST00000446501 MRS2Q9HD23 443 aa22.24■■□□□ 1.15
BRF1-206ENST00000446501 CHD1O14646 1710 aa22.24■■□□□ 1.15
BRF1-206ENST00000446501 USP47Q96K76 1375 aa22.24■■□□□ 1.15
BRF1-206ENST00000446501 B4GALNT3Q6L9W6 998 aa22.23■■□□□ 1.15
BRF1-206ENST00000446501 DCAF11Q8TEB1 546 aa22.22■■□□□ 1.15
BRF1-206ENST00000446501 MYT1LQ9UL68 1186 aa22.21■■□□□ 1.15
BRF1-206ENST00000446501 SHANK2Q9UPX8 1470 aa22.2■■□□□ 1.14
BRF1-206ENST00000446501 SAMD9LQ8IVG5 1584 aa22.19■■□□□ 1.14
BRF1-206ENST00000446501 SENP3-EIF4A1A0A087X0R7 540 aa22.19■■□□□ 1.14
BRF1-206ENST00000446501 CARD11Q9BXL7 1154 aa22.19■■□□□ 1.14
BRF1-206ENST00000446501 PPP4R2Q9NY27 417 aa22.19■■□□□ 1.14
BRF1-206ENST00000446501 RGL3Q3MIN7 710 aa22.18■■□□□ 1.14
BRF1-206ENST00000446501 CCDC141Q6ZP82 1450 aa22.17■■□□□ 1.14
BRF1-206ENST00000446501 ARHGAP5Q13017 1502 aa22.15■■□□□ 1.14
BRF1-206ENST00000446501 CDC42BPBQ9Y5S2 1711 aa22.15■■□□□ 1.14
BRF1-206ENST00000446501 SYCP2Q9BX26 1530 aa22.15■■□□□ 1.14
BRF1-206ENST00000446501 TTC37Q6PGP7 1564 aa22.14■■□□□ 1.14
BRF1-206ENST00000446501 PAK3O75914 559 aaPredicted RBP22.13■■□□□ 1.13
BRF1-206ENST00000446501 NOP58Q9Y2X3 529 aaKnown RBP22.13■■□□□ 1.13
BRF1-206ENST00000446501 ANO8Q9HCE9 1232 aaPredicted RBP22.13■■□□□ 1.13
BRF1-206ENST00000446501 ST20-MTHFSA0A0A6YYL1 179 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms