RNA–Protein interactions for RNA: ENST00000446501.6

BRF1-206, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2 BASIC

Gene BRF1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-206ENST00000446501 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.62■□□□□ 0.416e-7■■■■■ 196.2
BRF1-206ENST00000446501 SF3B1O75533 1304 aaKnown RBP eCLIP16.63■□□□□ 0.253e-6■■■■■ 56.8
BRF1-206ENST00000446501 DKC1O60832 514 aaKnown RBP eCLIP17.18■□□□□ 0.342e-6■■■■■ 56.4
BRF1-206ENST00000446501 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.18■□□□□ 0.349e-7■■■■■ 51.2
BRF1-206ENST00000446501 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.51■□□□□ 0.393e-6■■■■■ 50.8
BRF1-206ENST00000446501 EFTUD2Q15029 972 aaKnown RBP eCLIP16.95■□□□□ 0.38e-7■■■■■ 50.8
BRF1-206ENST00000446501 SF3A3Q12874 501 aaKnown RBP eCLIP17.83■□□□□ 0.452e-6■■■■■ 42.3
BRF1-206ENST00000446501 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.99■□□□□ 0.154e-6■■■■■ 41.2
BRF1-206ENST00000446501 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.17■□□□□ 0.346e-7■■■■■ 39.2
BRF1-206ENST00000446501 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.17■■□□□ 1.33e-6■■■■■ 37.9
BRF1-206ENST00000446501 EIF4G2P78344 907 aaKnown RBP eCLIP22.57■■□□□ 1.21e-6■■■■■ 36.9
BRF1-206ENST00000446501 HNRNPMP52272 730 aaKnown RBP eCLIP22.49■■□□□ 1.192e-7■■■■■ 35.3
BRF1-206ENST00000446501 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.11■■□□□ 1.132e-7■■■■■ 33.4
BRF1-206ENST00000446501 TARDBPQ13148 414 aaKnown RBP eCLIP15.51■□□□□ 0.071e-10■■■■■ 33.4
BRF1-206ENST00000446501 UPF1Q92900 1129 aaKnown RBP eCLIP16.63■□□□□ 0.253e-7■■■■■ 30.9
BRF1-206ENST00000446501 AQRO60306 1485 aaKnown RBP eCLIP23.43■■□□□ 1.344e-7■■■■■ 29.9
BRF1-206ENST00000446501 SF3B4Q15427 424 aaKnown RBP eCLIP16.17■□□□□ 0.182e-7■■■■■ 29.4
BRF1-206ENST00000446501 RBM22Q9NW64 420 aaKnown RBP eCLIP16.34■□□□□ 0.217e-7■■■■■ 27.3
BRF1-206ENST00000446501 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.85■□□□□ 0.611e-6■■■■□ 26.5
BRF1-206ENST00000446501 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.99■□□□□ 0.314e-6■■■■□ 26
BRF1-206ENST00000446501 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.59■□□□□ 0.412e-7■■■■□ 25.7
BRF1-206ENST00000446501 AKAP1Q92667 903 aaKnown RBP eCLIP15.37■□□□□ 0.059e-8■■■■□ 24.9
BRF1-206ENST00000446501 YWHAGP61981 247 aaKnown RBP eCLIP16.77■□□□□ 0.282e-6■■■■□ 24.1
BRF1-206ENST00000446501 RBFOX2O43251 390 aaKnown RBP eCLIP13.6□□□□□ -0.231e-8■■■■□ 22.2
BRF1-206ENST00000446501 EWSR1Q01844 656 aaKnown RBP eCLIP14.05□□□□□ -0.163e-6■■■■□ 20.1
BRF1-206ENST00000446501 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.36■□□□□ 0.695e-8■■■■□ 20
BRF1-206ENST00000446501 RBM15Q96T37 977 aaKnown RBP eCLIP17.04■□□□□ 0.326e-6■■■■□ 19.9
BRF1-206ENST00000446501 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.43■□□□□ 0.062e-6■■■■□ 19.6
BRF1-206ENST00000446501 FUSP35637 526 aaKnown RBP eCLIP10.79□□□□□ -0.682e-6■■■□□ 19.1
BRF1-206ENST00000446501 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.05■□□□□ 0.167e-7■■■□□ 18.6
BRF1-206ENST00000446501 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.5□□□□□ -0.411e-6■■■□□ 18
BRF1-206ENST00000446501 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.78■□□□□ 0.61e-6■■■□□ 18
BRF1-206ENST00000446501 PPIGQ13427 754 aaKnown RBP eCLIP15.5■□□□□ 0.073e-6■■■□□ 17
BRF1-206ENST00000446501 U2AF2P26368 475 aaKnown RBP eCLIP19.46■□□□□ 0.711e-6■■■□□ 16.3
BRF1-206ENST00000446501 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.26■■□□□ 1.154e-6■■□□□ 14.4
BRF1-206ENST00000446501 ZNF622Q969S3 477 aaKnown RBP eCLIP18.01■□□□□ 0.472e-8■■□□□ 12.3
BRF1-206ENST00000446501 XRCC6P12956 609 aaKnown RBP eCLIP20.64■□□□□ 0.892e-6■■□□□ 12.3
BRF1-206ENST00000446501 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.5■□□□□ 0.392e-6■■□□□ 11.8
BRF1-206ENST00000446501 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.2□□□□□ -0.141e-10■■□□□ 11.6
BRF1-206ENST00000446501 HLTFQ14527 1009 aaKnown RBP eCLIP17.78■□□□□ 0.441e-6■■□□□ 11.5
BRF1-206ENST00000446501 PUM1Q14671 1186 aaKnown RBP eCLIP15.32■□□□□ 0.045e-6■□□□□ 10.2
Retrieved 41 of 41 RNA–protein pairs in 14.6 ms