RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 SMG6Q86US8 1419 aaKnown RBP17.95■□□□□ 0.46
ACTN1-204ENST00000438964 CASKIN1Q8WXD9 1431 aa17.95■□□□□ 0.46
ACTN1-204ENST00000438964 FYCO1Q9BQS8 1478 aa17.93■□□□□ 0.46
ACTN1-204ENST00000438964 SLC4A1APQ9BWU0 796 aaKnown RBP17.91■□□□□ 0.46
ACTN1-204ENST00000438964 MYOM3Q5VTT5 1437 aa17.91■□□□□ 0.46
ACTN1-204ENST00000438964 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.89■□□□□ 0.45
ACTN1-204ENST00000438964 CDCA7LQ96GN5 454 aa17.88■□□□□ 0.45
ACTN1-204ENST00000438964 RRP1P56182 461 aaKnown RBP17.87■□□□□ 0.45
ACTN1-204ENST00000438964 PNISRQ8TF01 805 aaKnown RBP17.87■□□□□ 0.45
ACTN1-204ENST00000438964 ZNF644Q9H582 1327 aaPredicted RBP17.85■□□□□ 0.45
ACTN1-204ENST00000438964 RNF123Q5XPI4 1314 aa17.85■□□□□ 0.45
ACTN1-204ENST00000438964 BACH2Q9BYV9 841 aa17.85■□□□□ 0.45
ACTN1-204ENST00000438964 DHX29Q7Z478 1369 aaKnown RBP17.84■□□□□ 0.45
ACTN1-204ENST00000438964 KDM2AQ9Y2K7 1162 aa17.84■□□□□ 0.45
ACTN1-204ENST00000438964 RCAN3Q9UKA8 241 aa17.83■□□□□ 0.45
ACTN1-204ENST00000438964 FRAT1Q92837 279 aaPredicted RBP17.82■□□□□ 0.44
ACTN1-204ENST00000438964 SNAPC4Q5SXM2 1469 aa17.81■□□□□ 0.44
ACTN1-204ENST00000438964 NCAPD3P42695 1498 aa17.81■□□□□ 0.44
ACTN1-204ENST00000438964 TCERG1O14776 1098 aaKnown RBP17.79■□□□□ 0.44
ACTN1-204ENST00000438964 NFKBIBQ15653 356 aa17.79■□□□□ 0.44
ACTN1-204ENST00000438964 USP47Q96K76 1375 aa17.78■□□□□ 0.44
ACTN1-204ENST00000438964 ARXQ96QS3 562 aa17.78■□□□□ 0.44
ACTN1-204ENST00000438964 LRRIQ1Q96JM4 1722 aa17.78■□□□□ 0.44
ACTN1-204ENST00000438964 TDRD9Q8NDG6 1382 aaKnown RBP17.78■□□□□ 0.44
ACTN1-204ENST00000438964 GSE1Q14687 1217 aa17.77■□□□□ 0.44
ACTN1-204ENST00000438964 MAGI3Q5TCQ9 1506 aa17.77■□□□□ 0.43
ACTN1-204ENST00000438964 SPATA31E1Q6ZUB1 1445 aa17.77■□□□□ 0.43
ACTN1-204ENST00000438964 CRBNQ96SW2 442 aa17.76■□□□□ 0.43
ACTN1-204ENST00000438964 ANKRD30BQ9BXX2 1392 aa17.76■□□□□ 0.43
ACTN1-204ENST00000438964 C20orf194Q5TEA3 1177 aa17.76■□□□□ 0.43
ACTN1-204ENST00000438964 PPM1GO15355 546 aaPredicted RBP17.74■□□□□ 0.43
ACTN1-204ENST00000438964 DAXXQ9UER7 740 aaPredicted RBP17.74■□□□□ 0.43
ACTN1-204ENST00000438964 ZNF777Q9ULD5 760 aaPredicted RBP17.74■□□□□ 0.43
ACTN1-204ENST00000438964 CADPSQ9ULU8 1353 aa17.74■□□□□ 0.43
ACTN1-204ENST00000438964 WASHC2CQ9Y4E1 1318 aa17.73■□□□□ 0.43
ACTN1-204ENST00000438964 ST20-MTHFSA0A0A6YYL1 179 aa17.72■□□□□ 0.43
ACTN1-204ENST00000438964 FRAT2O75474 233 aaPredicted RBP17.72■□□□□ 0.43
ACTN1-204ENST00000438964 CARD11Q9BXL7 1154 aa17.72■□□□□ 0.43
ACTN1-204ENST00000438964 RGS3P49796 1198 aa17.71■□□□□ 0.43
ACTN1-204ENST00000438964 TEX14Q8IWB6 1497 aa17.71■□□□□ 0.43
ACTN1-204ENST00000438964 BCORL1Q5H9F3 1711 aa17.71■□□□□ 0.43
ACTN1-204ENST00000438964 CC2D1BQ5T0F9 858 aaKnown RBP17.71■□□□□ 0.43
ACTN1-204ENST00000438964 HMGXB3Q12766 1538 aa17.7■□□□□ 0.42
ACTN1-204ENST00000438964 USP35Q9P2H5 1018 aa17.7■□□□□ 0.42
ACTN1-204ENST00000438964 RPRD2Q5VT52 1461 aaKnown RBP17.7■□□□□ 0.42
ACTN1-204ENST00000438964 SUPT6HQ7KZ85 1726 aaKnown RBP17.7■□□□□ 0.42
ACTN1-204ENST00000438964 EFCAB5A4FU69 1503 aa17.69■□□□□ 0.42
ACTN1-204ENST00000438964 HECW1Q76N89 1606 aa17.68■□□□□ 0.42
ACTN1-204ENST00000438964 PKD2Q13563 968 aa17.67■□□□□ 0.42
ACTN1-204ENST00000438964 CDK13Q14004 1512 aaKnown RBP17.67■□□□□ 0.42
ACTN1-204ENST00000438964 DCAF11Q8TEB1 546 aa17.66■□□□□ 0.42
ACTN1-204ENST00000438964 GRIN2BQ13224 1484 aa17.66■□□□□ 0.42
ACTN1-204ENST00000438964 UGGT2Q9NYU1 1516 aa17.65■□□□□ 0.42
ACTN1-204ENST00000438964 POLA1P09884 1462 aaPredicted RBP17.65■□□□□ 0.42
ACTN1-204ENST00000438964 FANCD2Q9BXW9 1451 aa17.64■□□□□ 0.41
ACTN1-204ENST00000438964 MYBBP1AQ9BQG0 1328 aaKnown RBP17.62■□□□□ 0.41
ACTN1-204ENST00000438964 EHBP1L1Q8N3D4 1523 aa17.62■□□□□ 0.41
ACTN1-204ENST00000438964 UBE2Q2Q8WVN8 375 aa17.61■□□□□ 0.41
ACTN1-204ENST00000438964 NESP48681 1621 aa17.61■□□□□ 0.41
ACTN1-204ENST00000438964 MS4A1P11836 297 aa17.61■□□□□ 0.41
ACTN1-204ENST00000438964 CTTNBP2Q8WZ74 1663 aa17.6■□□□□ 0.41
ACTN1-204ENST00000438964 DDRGK1Q96HY6 314 aa17.6■□□□□ 0.41
ACTN1-204ENST00000438964 GCC2Q8IWJ2 1684 aa17.6■□□□□ 0.41
ACTN1-204ENST00000438964 KIF15Q9NS87 1388 aa17.58■□□□□ 0.41
ACTN1-204ENST00000438964 RGL3Q3MIN7 710 aa17.58■□□□□ 0.4
ACTN1-204ENST00000438964 LRPPRCP42704 1394 aaKnown RBP17.57■□□□□ 0.4
ACTN1-204ENST00000438964 SLKQ9H2G2 1235 aaPredicted RBP17.56■□□□□ 0.4
ACTN1-204ENST00000438964 POGKQ9P215 609 aa17.56■□□□□ 0.4
ACTN1-204ENST00000438964 DAPK1P53355 1430 aa17.55■□□□□ 0.4
ACTN1-204ENST00000438964 MIA2Q96PC5 1412 aa17.55■□□□□ 0.4
ACTN1-204ENST00000438964 ABCC5O15440 1437 aa17.54■□□□□ 0.4
ACTN1-204ENST00000438964 ABCA10Q8WWZ4 1543 aa17.54■□□□□ 0.4
ACTN1-204ENST00000438964 TOPBP1Q92547 1522 aa17.54■□□□□ 0.4
ACTN1-204ENST00000438964 THOC2Q8NI27 1593 aaKnown RBP17.53■□□□□ 0.4
ACTN1-204ENST00000438964 ABCA5Q8WWZ7 1642 aa17.53■□□□□ 0.4
ACTN1-204ENST00000438964 C8orf34Q49A92 452 aa17.53■□□□□ 0.4
ACTN1-204ENST00000438964 NLRP13Q86W25 1043 aa17.53■□□□□ 0.4
ACTN1-204ENST00000438964 BRD4O60885 1362 aaPredicted RBP17.53■□□□□ 0.4
ACTN1-204ENST00000438964 SPRYD3Q8NCJ5 442 aa17.52■□□□□ 0.4
ACTN1-204ENST00000438964 TCOF1Q13428 1488 aaKnown RBP17.52■□□□□ 0.4
ACTN1-204ENST00000438964 RALBP1Q15311 655 aa17.51■□□□□ 0.39
ACTN1-204ENST00000438964 NBPF1Q3BBV0 1214 aa17.51■□□□□ 0.39
ACTN1-204ENST00000438964 EPRSP07814 1512 aaKnown RBP17.51■□□□□ 0.39
ACTN1-204ENST00000438964 ARHGEF11O15085 1522 aa17.5■□□□□ 0.39
ACTN1-204ENST00000438964 PZPP20742 1482 aa17.49■□□□□ 0.39
ACTN1-204ENST00000438964 POLR1AO95602 1720 aaPredicted RBP17.49■□□□□ 0.39
ACTN1-204ENST00000438964 FAM161AQ3B820 660 aa17.48■□□□□ 0.39
ACTN1-204ENST00000438964 CFDP1Q9UEE9 299 aaPredicted RBP17.48■□□□□ 0.39
ACTN1-204ENST00000438964 ADAMTS8Q9UP79 889 aa17.48■□□□□ 0.39
ACTN1-204ENST00000438964 KTN1Q86UP2 1357 aaKnown RBP17.48■□□□□ 0.39
ACTN1-204ENST00000438964 SAMD9Q5K651 1589 aa17.48■□□□□ 0.39
ACTN1-204ENST00000438964 PRDM2Q13029 1718 aa17.47■□□□□ 0.39
ACTN1-204ENST00000438964 SEC24BO95487 1268 aa17.46■□□□□ 0.39
ACTN1-204ENST00000438964 CCDC146Q8IYE0 955 aa17.46■□□□□ 0.39
ACTN1-204ENST00000438964 KDM5CP41229 1560 aa17.46■□□□□ 0.39
ACTN1-204ENST00000438964 ROCK2O75116 1388 aaKnown RBP17.46■□□□□ 0.39
ACTN1-204ENST00000438964 GZF1Q9H116 711 aaPredicted RBP17.46■□□□□ 0.39
ACTN1-204ENST00000438964 RRAGDQ9NQL2 400 aaPredicted RBP17.46■□□□□ 0.39
ACTN1-204ENST00000438964 PANK3Q9H999 370 aa17.45■□□□□ 0.38
ACTN1-204ENST00000438964 DNAJC5BQ9UF47 199 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms