RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 CANXP27824 592 aaKnown RBP18.23■□□□□ 0.51
SGMS1-203ENST00000429490 EXOC6Q8TAG9 804 aa18.23■□□□□ 0.51
SGMS1-203ENST00000429490 NAIPQ13075 1403 aa18.22■□□□□ 0.51
SGMS1-203ENST00000429490 PLIN1O60240 522 aa18.22■□□□□ 0.51
SGMS1-203ENST00000429490 HFM1A2PYH4 1435 aa18.22■□□□□ 0.51
SGMS1-203ENST00000429490 RCAN3Q9UKA8 241 aa18.22■□□□□ 0.51
SGMS1-203ENST00000429490 PTPRKQ15262 1439 aa18.21■□□□□ 0.51
SGMS1-203ENST00000429490 ST20-MTHFSA0A0A6YYL1 179 aa18.21■□□□□ 0.51
SGMS1-203ENST00000429490 RGS3P49796 1198 aa18.21■□□□□ 0.5
SGMS1-203ENST00000429490 BIVM-ERCC5R4GMW8 1640 aa18.2■□□□□ 0.5
SGMS1-203ENST00000429490 CHMP7Q8WUX9 453 aaPredicted RBP18.2■□□□□ 0.5
SGMS1-203ENST00000429490 FYCO1Q9BQS8 1478 aa18.18■□□□□ 0.5
SGMS1-203ENST00000429490 WDR43Q15061 677 aaKnown RBP eCLIP18.17■□□□□ 0.5
SGMS1-203ENST00000429490 AQRO60306 1485 aaKnown RBP eCLIP18.16■□□□□ 0.53e-7■■■■□ 26.7
SGMS1-203ENST00000429490 PLEKHD1A6NEE1 506 aa18.16■□□□□ 0.5
SGMS1-203ENST00000429490 USP47Q96K76 1375 aa18.15■□□□□ 0.5
SGMS1-203ENST00000429490 SLC4A3P48751 1232 aa18.15■□□□□ 0.5
SGMS1-203ENST00000429490 NUP155O75694 1391 aa18.13■□□□□ 0.49
SGMS1-203ENST00000429490 NESP48681 1621 aa18.12■□□□□ 0.49
SGMS1-203ENST00000429490 DNAJC5BQ9UF47 199 aa18.11■□□□□ 0.49
SGMS1-203ENST00000429490 PDE4AP27815 886 aa18.1■□□□□ 0.49
SGMS1-203ENST00000429490 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.1■□□□□ 0.49
SGMS1-203ENST00000429490 SKAP1Q86WV1 359 aa18.09■□□□□ 0.49
SGMS1-203ENST00000429490 RRP1P56182 461 aaKnown RBP18.09■□□□□ 0.49
SGMS1-203ENST00000429490 MAP3K1Q13233 1512 aa18.08■□□□□ 0.48
SGMS1-203ENST00000429490 CDCA7LQ96GN5 454 aa18.08■□□□□ 0.48
SGMS1-203ENST00000429490 SENP3Q9H4L4 574 aaPredicted RBP18.08■□□□□ 0.48
SGMS1-203ENST00000429490 TCERG1O14776 1098 aaKnown RBP18.06■□□□□ 0.48
SGMS1-203ENST00000429490 NEUROD2Q15784 382 aa18.06■□□□□ 0.48
SGMS1-203ENST00000429490 POLA1P09884 1462 aaPredicted RBP18.06■□□□□ 0.48
SGMS1-203ENST00000429490 PPM1GO15355 546 aaPredicted RBP18.06■□□□□ 0.48
SGMS1-203ENST00000429490 HMGXB3Q12766 1538 aa18.06■□□□□ 0.48
SGMS1-203ENST00000429490 ROCK2O75116 1388 aaKnown RBP18.05■□□□□ 0.48
SGMS1-203ENST00000429490 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.05■□□□□ 0.481e-7■□□□□ 9.5
SGMS1-203ENST00000429490 GAPVD1Q14C86 1478 aa18.05■□□□□ 0.48
SGMS1-203ENST00000429490 HNRNPMP52272 730 aaKnown RBP eCLIP18.05■□□□□ 0.482e-6■■■■□ 21.2
SGMS1-203ENST00000429490 KNSTRNQ9Y448 316 aa18.04■□□□□ 0.48
SGMS1-203ENST00000429490 PNISRQ8TF01 805 aaKnown RBP18.03■□□□□ 0.48
SGMS1-203ENST00000429490 DDRGK1Q96HY6 314 aa18.03■□□□□ 0.48
SGMS1-203ENST00000429490 NLRP13Q86W25 1043 aa18.03■□□□□ 0.48
SGMS1-203ENST00000429490 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.03■□□□□ 0.48
SGMS1-203ENST00000429490 RALBP1Q15311 655 aa18.03■□□□□ 0.48
SGMS1-203ENST00000429490 KTN1Q86UP2 1357 aaKnown RBP18.02■□□□□ 0.48
SGMS1-203ENST00000429490 CHGAP10645 457 aaKnown RBP18.02■□□□□ 0.48
SGMS1-203ENST00000429490 CRBNQ96SW2 442 aa18.02■□□□□ 0.47
SGMS1-203ENST00000429490 MYBBP1AQ9BQG0 1328 aaKnown RBP18.01■□□□□ 0.47
SGMS1-203ENST00000429490 IL27Q8NEV9 243 aa18.01■□□□□ 0.47
SGMS1-203ENST00000429490 PTPN23Q9H3S7 1636 aa18■□□□□ 0.47
SGMS1-203ENST00000429490 PDS5BQ9NTI5 1447 aa17.99■□□□□ 0.47
SGMS1-203ENST00000429490 TNNT2P45379 298 aaPredicted RBP17.99■□□□□ 0.47
SGMS1-203ENST00000429490 KIF15Q9NS87 1388 aa17.99■□□□□ 0.47
SGMS1-203ENST00000429490 TOPBP1Q92547 1522 aa17.98■□□□□ 0.47
SGMS1-203ENST00000429490 EFCAB5A4FU69 1503 aa17.97■□□□□ 0.47
SGMS1-203ENST00000429490 FRAT1Q92837 279 aaPredicted RBP17.97■□□□□ 0.47
SGMS1-203ENST00000429490 ANKRD30AQ9BXX3 1397 aa17.97■□□□□ 0.47
SGMS1-203ENST00000429490 PANK3Q9H999 370 aa17.97■□□□□ 0.47
SGMS1-203ENST00000429490 CCDC146Q8IYE0 955 aa17.96■□□□□ 0.47
SGMS1-203ENST00000429490 NCOA1Q15788 1441 aa17.96■□□□□ 0.47
SGMS1-203ENST00000429490 CDK13Q14004 1512 aaKnown RBP17.95■□□□□ 0.46
SGMS1-203ENST00000429490 TMF1P82094 1093 aa17.95■□□□□ 0.46
SGMS1-203ENST00000429490 ANO8Q9HCE9 1232 aaPredicted RBP17.94■□□□□ 0.46
SGMS1-203ENST00000429490 ANKRD30BQ9BXX2 1392 aa17.94■□□□□ 0.46
SGMS1-203ENST00000429490 SMG6Q86US8 1419 aaKnown RBP17.93■□□□□ 0.46
SGMS1-203ENST00000429490 NBPF1Q3BBV0 1214 aa17.92■□□□□ 0.46
SGMS1-203ENST00000429490 SPRYD3Q8NCJ5 442 aa17.9■□□□□ 0.46
SGMS1-203ENST00000429490 SLKQ9H2G2 1235 aaPredicted RBP17.9■□□□□ 0.46
SGMS1-203ENST00000429490 UPF2Q9HAU5 1272 aaKnown RBP17.9■□□□□ 0.46
SGMS1-203ENST00000429490 EHBP1L1Q8N3D4 1523 aa17.89■□□□□ 0.45
SGMS1-203ENST00000429490 ABCA10Q8WWZ4 1543 aa17.88■□□□□ 0.45
SGMS1-203ENST00000429490 PDE3BQ13370 1112 aa17.87■□□□□ 0.45
SGMS1-203ENST00000429490 SUPT6HQ7KZ85 1726 aaKnown RBP17.87■□□□□ 0.45
SGMS1-203ENST00000429490 BACH2Q9BYV9 841 aa17.85■□□□□ 0.45
SGMS1-203ENST00000429490 DAPK1P53355 1430 aa17.85■□□□□ 0.45
SGMS1-203ENST00000429490 PRG4Q92954 1404 aaPredicted RBP17.84■□□□□ 0.45
SGMS1-203ENST00000429490 ADAMTS8Q9UP79 889 aa17.84■□□□□ 0.45
SGMS1-203ENST00000429490 EPRSP07814 1512 aaKnown RBP17.84■□□□□ 0.45
SGMS1-203ENST00000429490 BRPF3Q9ULD4 1205 aa17.83■□□□□ 0.45
SGMS1-203ENST00000429490 GOLGA2Q08379 1002 aa17.83■□□□□ 0.44
SGMS1-203ENST00000429490 JPH4Q96JJ6 628 aa17.83■□□□□ 0.44
SGMS1-203ENST00000429490 ANKRD50Q9ULJ7 1429 aa17.83■□□□□ 0.44
SGMS1-203ENST00000429490 C20orf194Q5TEA3 1177 aa17.82■□□□□ 0.44
SGMS1-203ENST00000429490 PRDM2Q13029 1718 aa17.82■□□□□ 0.44
SGMS1-203ENST00000429490 RPRD2Q5VT52 1461 aaKnown RBP17.81■□□□□ 0.44
SGMS1-203ENST00000429490 DNMBPQ6XZF7 1577 aa17.81■□□□□ 0.44
SGMS1-203ENST00000429490 CFAP43Q8NDM7 1665 aa17.8■□□□□ 0.44
SGMS1-203ENST00000429490 ABCC5O15440 1437 aa17.8■□□□□ 0.44
SGMS1-203ENST00000429490 MIA2Q96PC5 1412 aa17.8■□□□□ 0.44
SGMS1-203ENST00000429490 BRD4O60885 1362 aaPredicted RBP17.8■□□□□ 0.44
SGMS1-203ENST00000429490 SNAPC4Q5SXM2 1469 aa17.8■□□□□ 0.44
SGMS1-203ENST00000429490 GSE1Q14687 1217 aa17.8■□□□□ 0.44
SGMS1-203ENST00000429490 NFKBIBQ15653 356 aa17.8■□□□□ 0.44
SGMS1-203ENST00000429490 MS4A1P11836 297 aa17.79■□□□□ 0.44
SGMS1-203ENST00000429490 CLUAP1Q96AJ1 413 aa17.79■□□□□ 0.44
SGMS1-203ENST00000429490 APAF1O14727 1248 aa17.78■□□□□ 0.44
SGMS1-203ENST00000429490 BECN1Q14457 450 aa17.78■□□□□ 0.44
SGMS1-203ENST00000429490 KIAA1107Q9UPP5 1409 aa17.78■□□□□ 0.44
SGMS1-203ENST00000429490 BCL2L13Q9BXK5 485 aa17.78■□□□□ 0.44
SGMS1-203ENST00000429490 USP35Q9P2H5 1018 aa17.77■□□□□ 0.44
SGMS1-203ENST00000429490 RRP7AQ9Y3A4 280 aaKnown RBP17.77■□□□□ 0.44
SGMS1-203ENST00000429490 CCDC144AA2RUR9 1427 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms