RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 FMR1Q06787 632 aaKnown RBP eCLIP15.56■□□□□ 0.082e-16■■■■■ 102.3
SGMS1-203ENST00000429490 ILF3Q12906 894 aaKnown RBP eCLIP12.7□□□□□ -0.383e-13■■■■■ 49.5
SGMS1-203ENST00000429490 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.33□□□□□ -0.68e-12■■■■■ 44.3
SGMS1-203ENST00000429490 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.76□□□□□ -0.051e-10■■■■■ 47.2
SGMS1-203ENST00000429490 CSTF2P33240 577 aaKnown RBP eCLIP13.22□□□□□ -0.291e-10■■■■■ 30.5
SGMS1-203ENST00000429490 NCBP2P52298 156 aaKnown RBP eCLIP13.09□□□□□ -0.312e-10■■■■□ 21.3
SGMS1-203ENST00000429490 QKIQ96PU8 341 aaKnown RBP eCLIP13.96□□□□□ -0.174e-10■■■■□ 20.5
SGMS1-203ENST00000429490 SND1Q7KZF4 910 aaKnown RBP eCLIP15.46■□□□□ 0.072e-9■□□□□ 10.9
SGMS1-203ENST00000429490 PCBP2Q15366 365 aaKnown RBP eCLIP13.31□□□□□ -0.283e-9■■■■■ 47.4
SGMS1-203ENST00000429490 EIF4G2P78344 907 aaKnown RBP eCLIP18.85■□□□□ 0.615e-9■■■□□ 17.2
SGMS1-203ENST00000429490 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.74■□□□□ 0.277e-9■■■□□ 17.9
SGMS1-203ENST00000429490 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.85□□□□□ -0.358e-9■■□□□ 13.4
SGMS1-203ENST00000429490 DDX3XO00571 662 aaKnown RBP eCLIP14.81□□□□□ -0.049e-9■■□□□ 14.4
SGMS1-203ENST00000429490 HNRNPLP14866 589 aaKnown RBP eCLIP14.05□□□□□ -0.161e-8■■■□□ 18.5
SGMS1-203ENST00000429490 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.72□□□□□ -0.211e-8■■■■■ 58.8
SGMS1-203ENST00000429490 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.81■□□□□ 0.124e-8■□□□□ 8.5
SGMS1-203ENST00000429490 PTBP1P26599 531 aaKnown RBP eCLIP12.68□□□□□ -0.387e-8■■■■□ 24.3
SGMS1-203ENST00000429490 ZNF622Q969S3 477 aaKnown RBP eCLIP14.98□□□□□ -0.018e-8■■■■□ 21.4
SGMS1-203ENST00000429490 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.6□□□□□ -0.071e-7■■■□□ 14.9
SGMS1-203ENST00000429490 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.05■□□□□ 0.481e-7■□□□□ 9.5
SGMS1-203ENST00000429490 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.94□□□□□ -0.021e-7■□□□□ 10.8
SGMS1-203ENST00000429490 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.76□□□□□ -0.212e-7■■■■■ 26.8
SGMS1-203ENST00000429490 FUSP35637 526 aaKnown RBP eCLIP9.36□□□□□ -0.912e-7■■□□□ 14.1
SGMS1-203ENST00000429490 AQRO60306 1485 aaKnown RBP eCLIP18.16■□□□□ 0.53e-7■■■■□ 26.7
SGMS1-203ENST00000429490 KHSRPQ92945 711 aaKnown RBP eCLIP13.8□□□□□ -0.23e-7■■■□□ 15.3
SGMS1-203ENST00000429490 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.43■□□□□ 0.063e-7■■■■□ 23.1
SGMS1-203ENST00000429490 MATR3P43243 847 aaKnown RBP eCLIP15.68■□□□□ 0.15e-7■■■■□ 19.6
SGMS1-203ENST00000429490 NONOQ15233 471 aaKnown RBP eCLIP15.26■□□□□ 0.036e-7■■■□□ 17.6
SGMS1-203ENST00000429490 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.32□□□□□ -0.127e-7■■■■■ 59.7
SGMS1-203ENST00000429490 YBX3P16989 372 aaKnown RBP eCLIP13.97□□□□□ -0.177e-7■□□□□ 8.7
SGMS1-203ENST00000429490 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.06□□□□□ -0.327e-7■■■□□ 17.8
SGMS1-203ENST00000429490 RBFOX2O43251 390 aaKnown RBP eCLIP11.48□□□□□ -0.577e-7■■■□□ 15.9
SGMS1-203ENST00000429490 XRCC6P12956 609 aaKnown RBP eCLIP17.13■□□□□ 0.338e-7■■■■■ 41.4
SGMS1-203ENST00000429490 EWSR1Q01844 656 aaKnown RBP eCLIP12.01□□□□□ -0.498e-7■■■□□ 16.1
SGMS1-203ENST00000429490 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.81□□□□□ -0.369e-7■■■■□ 20.7
SGMS1-203ENST00000429490 AGGF1Q8N302 714 aaeCLIP14.52□□□□□ -0.089e-7■■□□□ 13.8
SGMS1-203ENST00000429490 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.21■□□□□ 0.029e-7■■■■■ 87.5
SGMS1-203ENST00000429490 RBM15Q96T37 977 aaKnown RBP eCLIP14.67□□□□□ -0.061e-6■■■■□ 19.3
SGMS1-203ENST00000429490 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.31□□□□□ -0.441e-6■■■■■ 27
SGMS1-203ENST00000429490 GPKOWQ92917 476 aaPredicted RBP eCLIP15.46■□□□□ 0.071e-6■□□□□ 9.3
SGMS1-203ENST00000429490 SF3B4Q15427 424 aaKnown RBP eCLIP13.36□□□□□ -0.271e-6■■■□□ 19
SGMS1-203ENST00000429490 TARDBPQ13148 414 aaKnown RBP eCLIP13.27□□□□□ -0.291e-6■■■■□ 26.2
SGMS1-203ENST00000429490 U2AF2P26368 475 aaKnown RBP eCLIP16.25■□□□□ 0.192e-6■■■□□ 18.1
SGMS1-203ENST00000429490 HNRNPMP52272 730 aaKnown RBP eCLIP18.05■□□□□ 0.482e-6■■■■□ 21.2
SGMS1-203ENST00000429490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.42■□□□□ 0.542e-6■■■□□ 15
SGMS1-203ENST00000429490 DDX6P26196 483 aaKnown RBP eCLIP12.86□□□□□ -0.354e-6■□□□□ 10.2
SGMS1-203ENST00000429490 PUM1Q14671 1186 aaKnown RBP eCLIP12.98□□□□□ -0.334e-6■■□□□ 12.3
SGMS1-203ENST00000429490 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.08□□□□□ -0.324e-6■□□□□ 10
SGMS1-203ENST00000429490 SF3B1O75533 1304 aaKnown RBP eCLIP13.93□□□□□ -0.184e-6■■■■■ 94.6
SGMS1-203ENST00000429490 WRNQ14191 1432 aaPredicted RBP eCLIP19.64■□□□□ 0.735e-6■■■■■ 29.2
SGMS1-203ENST00000429490 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.87■□□□□ 0.135e-6■■■■□ 23.1
SGMS1-203ENST00000429490 TIA1P31483 386 aaKnown RBP eCLIP13.17□□□□□ -0.35e-6■□□□□ 8.4
SGMS1-203ENST00000429490 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.28□□□□□ -0.126e-6■■■□□ 14.6
SGMS1-203ENST00000429490 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.08□□□□□ -0.157e-6■■□□□ 13.7
Retrieved 54 of 54 RNA–protein pairs in 24.3 ms