RNA–Protein interactions for RNA: ENST00000428549.8

ABCA8-202, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-202ENST00000428549 KIAA0556O60303 1618 aa12.99□□□□□ -0.33
ABCA8-202ENST00000428549 FHOD3Q2V2M9 1422 aa12.98□□□□□ -0.33
ABCA8-202ENST00000428549 FMN1Q68DA7 1419 aa12.97□□□□□ -0.33
ABCA8-202ENST00000428549 NPM1P06748 294 aaKnown RBP eCLIP12.94□□□□□ -0.34
ABCA8-202ENST00000428549 FYCO1Q9BQS8 1478 aa12.93□□□□□ -0.34
ABCA8-202ENST00000428549 ZBTB7CA1YPR0 619 aa12.93□□□□□ -0.34
ABCA8-202ENST00000428549 P3H3Q8IVL6 736 aa12.93□□□□□ -0.34
ABCA8-202ENST00000428549 PCF11O94913 1555 aaKnown RBP12.93□□□□□ -0.34
ABCA8-202ENST00000428549 CASKIN1Q8WXD9 1431 aa12.92□□□□□ -0.34
ABCA8-202ENST00000428549 MAP3K1Q13233 1512 aa12.91□□□□□ -0.34
ABCA8-202ENST00000428549 HOXD11P31277 338 aaPredicted RBP12.91□□□□□ -0.34
ABCA8-202ENST00000428549 UACAQ9BZF9 1416 aa12.9□□□□□ -0.34
ABCA8-202ENST00000428549 BCCIPQ9P287 314 aaKnown RBP eCLIP12.88□□□□□ -0.35
ABCA8-202ENST00000428549 UHRF1BP1LA0JNW5 1464 aa12.88□□□□□ -0.35
ABCA8-202ENST00000428549 PAXIP1Q6ZW49 1069 aaPredicted RBP12.88□□□□□ -0.35
ABCA8-202ENST00000428549 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.88□□□□□ -0.35
ABCA8-202ENST00000428549 ADCY10Q96PN6 1610 aa12.87□□□□□ -0.35
ABCA8-202ENST00000428549 TRHP20396 242 aaPredicted RBP12.87□□□□□ -0.35
ABCA8-202ENST00000428549 HECW1Q76N89 1606 aa12.87□□□□□ -0.35
ABCA8-202ENST00000428549 CFAP43Q8NDM7 1665 aa12.86□□□□□ -0.35
ABCA8-202ENST00000428549 BCL11BQ9C0K0 894 aaPredicted RBP12.86□□□□□ -0.35
ABCA8-202ENST00000428549 TIAM1Q13009 1591 aa12.86□□□□□ -0.35
ABCA8-202ENST00000428549 ABCC2Q92887 1545 aa12.85□□□□□ -0.35
ABCA8-202ENST00000428549 FGD1P98174 961 aa12.84□□□□□ -0.35
ABCA8-202ENST00000428549 RNF216Q9NWF9 866 aaPredicted RBP12.84□□□□□ -0.35
ABCA8-202ENST00000428549 RAPGEF6Q8TEU7 1601 aa12.84□□□□□ -0.35
ABCA8-202ENST00000428549 CCDC18Q5T9S5 1454 aa12.84□□□□□ -0.35
ABCA8-202ENST00000428549 PLB1Q6P1J6 1458 aa12.84□□□□□ -0.35
ABCA8-202ENST00000428549 POLR3GLQ9BT43 218 aa12.84□□□□□ -0.35
ABCA8-202ENST00000428549 CFAP44Q96MT7 982 aa12.82□□□□□ -0.36
ABCA8-202ENST00000428549 ABCA8O94911 1581 aa12.82□□□□□ -0.36
ABCA8-202ENST00000428549 KDM5BQ9UGL1 1544 aa12.8□□□□□ -0.36
ABCA8-202ENST00000428549 LRRIQ1Q96JM4 1722 aa12.8□□□□□ -0.36
ABCA8-202ENST00000428549 MAPKBP1O60336 1514 aa12.8□□□□□ -0.36
ABCA8-202ENST00000428549 BBXQ8WY36 941 aaPredicted RBP12.79□□□□□ -0.36
ABCA8-202ENST00000428549 EPRSP07814 1512 aaKnown RBP12.79□□□□□ -0.36
ABCA8-202ENST00000428549 NUP153P49790 1475 aaKnown RBP12.78□□□□□ -0.36
ABCA8-202ENST00000428549 LRRC9Q6ZRR7 1453 aa12.78□□□□□ -0.36
ABCA8-202ENST00000428549 ZNF326Q5BKZ1 582 aaKnown RBP12.78□□□□□ -0.36
ABCA8-202ENST00000428549 TSHZ2Q9NRE2 1034 aa12.78□□□□□ -0.36
ABCA8-202ENST00000428549 FOXD4L1Q9NU39 408 aa12.78□□□□□ -0.36
ABCA8-202ENST00000428549 RSPH4AQ5TD94 716 aa12.77□□□□□ -0.36
ABCA8-202ENST00000428549 ATP1B4Q9UN42 357 aaPredicted RBP12.77□□□□□ -0.37
ABCA8-202ENST00000428549 ASXL2Q76L83 1435 aa12.76□□□□□ -0.37
ABCA8-202ENST00000428549 FAM69CQ0P6D2 419 aa12.76□□□□□ -0.37
ABCA8-202ENST00000428549 EHBP1L1Q8N3D4 1523 aa12.75□□□□□ -0.37
ABCA8-202ENST00000428549 DCAF8L1A6NGE4 600 aa12.75□□□□□ -0.37
ABCA8-202ENST00000428549 ARID3CA6NKF2 412 aa12.75□□□□□ -0.37
ABCA8-202ENST00000428549 KANK4Q5T7N3 995 aaPredicted RBP12.75□□□□□ -0.37
ABCA8-202ENST00000428549 PPARGC1BQ86YN6 1023 aaKnown RBP12.75□□□□□ -0.37
ABCA8-202ENST00000428549 ZCCHC11Q5TAX3 1644 aaKnown RBP12.75□□□□□ -0.37
ABCA8-202ENST00000428549 ATP10BO94823 1461 aa12.74□□□□□ -0.37
ABCA8-202ENST00000428549 ABCC10Q5T3U5 1492 aa12.74□□□□□ -0.37
ABCA8-202ENST00000428549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.74□□□□□ -0.37
ABCA8-202ENST00000428549 HNRNPUL2Q1KMD3 747 aaKnown RBP12.74□□□□□ -0.37
ABCA8-202ENST00000428549 CDK13Q14004 1512 aaKnown RBP12.73□□□□□ -0.37
ABCA8-202ENST00000428549 NECTIN2Q92692 538 aa12.73□□□□□ -0.37
ABCA8-202ENST00000428549 MTUS2Q5JR59 1369 aa12.72□□□□□ -0.37
ABCA8-202ENST00000428549 ARID3AQ99856 593 aa12.71□□□□□ -0.37
ABCA8-202ENST00000428549 WDR7Q9Y4E6 1490 aa12.7□□□□□ -0.38
ABCA8-202ENST00000428549 PLEKHD1A6NEE1 506 aa12.7□□□□□ -0.38
ABCA8-202ENST00000428549 KCNH8Q96L42 1107 aa12.7□□□□□ -0.38
ABCA8-202ENST00000428549 MAGI3Q5TCQ9 1506 aa12.69□□□□□ -0.38
ABCA8-202ENST00000428549 DIP2BQ9P265 1576 aa12.69□□□□□ -0.38
ABCA8-202ENST00000428549 KIF13AQ9H1H9 1805 aa12.69□□□□□ -0.38
ABCA8-202ENST00000428549 SUPT6HQ7KZ85 1726 aaKnown RBP12.69□□□□□ -0.38
ABCA8-202ENST00000428549 GLI2P10070 1586 aa12.67□□□□□ -0.38
ABCA8-202ENST00000428549 TROQ12816 1431 aaPredicted RBP12.66□□□□□ -0.38
ABCA8-202ENST00000428549 CENPBP07199 599 aaPredicted RBP12.66□□□□□ -0.38
ABCA8-202ENST00000428549 RRBP1Q9P2E9 1410 aaKnown RBP12.66□□□□□ -0.38
ABCA8-202ENST00000428549 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.66□□□□□ -0.38
ABCA8-202ENST00000428549 NCOA2Q15596 1464 aa12.65□□□□□ -0.38
ABCA8-202ENST00000428549 PCGF6Q9BYE7 350 aa12.64□□□□□ -0.39
ABCA8-202ENST00000428549 PHLDB1Q86UU1 1377 aa12.63□□□□□ -0.39
ABCA8-202ENST00000428549 RSPH6AQ9H0K4 717 aa12.62□□□□□ -0.39
ABCA8-202ENST00000428549 ZMYND15Q9H091 742 aa12.62□□□□□ -0.39
ABCA8-202ENST00000428549 TICAM2Q86XR7 235 aa12.61□□□□□ -0.39
ABCA8-202ENST00000428549 KIF14Q15058 1648 aa12.61□□□□□ -0.39
ABCA8-202ENST00000428549 MYOM3Q5VTT5 1437 aa12.6□□□□□ -0.39
ABCA8-202ENST00000428549 CD109Q6YHK3 1445 aa12.6□□□□□ -0.39
ABCA8-202ENST00000428549 CCNB3Q8WWL7 1395 aa12.6□□□□□ -0.39
ABCA8-202ENST00000428549 TSPOAP1O95153 1857 aa12.6□□□□□ -0.39
ABCA8-202ENST00000428549 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.59□□□□□ -0.39
ABCA8-202ENST00000428549 BRPF1P55201 1214 aaPredicted RBP12.59□□□□□ -0.39
ABCA8-202ENST00000428549 MAP3K4Q9Y6R4 1608 aa12.58□□□□□ -0.4
ABCA8-202ENST00000428549 FGD6Q6ZV73 1430 aa12.58□□□□□ -0.4
ABCA8-202ENST00000428549 MIA2Q96PC5 1412 aa12.57□□□□□ -0.4
ABCA8-202ENST00000428549 ITSN2Q9NZM3 1697 aa12.57□□□□□ -0.4
ABCA8-202ENST00000428549 TEX14Q8IWB6 1497 aa12.57□□□□□ -0.4
ABCA8-202ENST00000428549 ABCA9Q8IUA7 1624 aa12.56□□□□□ -0.4
ABCA8-202ENST00000428549 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.55□□□□□ -0.4
ABCA8-202ENST00000428549 CLSTN1O94985 981 aa12.55□□□□□ -0.4
ABCA8-202ENST00000428549 TCOF1Q13428 1488 aaKnown RBP12.54□□□□□ -0.4
ABCA8-202ENST00000428549 PPRC1Q5VV67 1664 aaKnown RBP12.54□□□□□ -0.4
ABCA8-202ENST00000428549 PTPN23Q9H3S7 1636 aa12.53□□□□□ -0.4
ABCA8-202ENST00000428549 PKD2Q13563 968 aa12.53□□□□□ -0.4
ABCA8-202ENST00000428549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.53□□□□□ -0.4
ABCA8-202ENST00000428549 GPATCH8Q9UKJ3 1502 aaKnown RBP12.52□□□□□ -0.4
ABCA8-202ENST00000428549 RAD21O60216 631 aa12.52□□□□□ -0.4
ABCA8-202ENST00000428549 KCTD17Q8N5Z5 321 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms