RNA–Protein interactions for RNA: ENST00000428549.8

ABCA8-202, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-202ENST00000428549 AEBP2Q6ZN18 517 aaPredicted RBP19.74■□□□□ 0.75
ABCA8-202ENST00000428549 NISCHQ9Y2I1 1504 aa19.11■□□□□ 0.65
ABCA8-202ENST00000428549 CHIC1Q5VXU3 224 aa18.88■□□□□ 0.61
ABCA8-202ENST00000428549 SLC24A1O60721 1099 aa17.77■□□□□ 0.44
ABCA8-202ENST00000428549 CCDC180Q9P1Z9 1646 aa16.87■□□□□ 0.29
ABCA8-202ENST00000428549 SENP3Q9H4L4 574 aaPredicted RBP16.74■□□□□ 0.27
ABCA8-202ENST00000428549 PHF23Q9BUL5 403 aaPredicted RBP16.61■□□□□ 0.25
ABCA8-202ENST00000428549 ABCC9O60706 1549 aa16.47■□□□□ 0.23
ABCA8-202ENST00000428549 DAXXQ9UER7 740 aaPredicted RBP16.31■□□□□ 0.2
ABCA8-202ENST00000428549 TTBK1Q5TCY1 1321 aaPredicted RBP16.12■□□□□ 0.17
ABCA8-202ENST00000428549 MYT1Q01538 1121 aa16.12■□□□□ 0.17
ABCA8-202ENST00000428549 EHMT2Q96KQ7 1210 aa16.1■□□□□ 0.17
ABCA8-202ENST00000428549 ZCCHC6Q5VYS8 1495 aaKnown RBP16.05■□□□□ 0.16
ABCA8-202ENST00000428549 DCAF8L2P0C7V8 631 aa15.96■□□□□ 0.15
ABCA8-202ENST00000428549 NCBP3Q53F19 620 aaKnown RBP15.9■□□□□ 0.14
ABCA8-202ENST00000428549 NACADO15069 1562 aa15.88■□□□□ 0.13
ABCA8-202ENST00000428549 DCAF1Q9Y4B6 1507 aa15.88■□□□□ 0.13
ABCA8-202ENST00000428549 RB1CC1Q8TDY2 1594 aa15.87■□□□□ 0.13
ABCA8-202ENST00000428549 MYO15BQ96JP2 1530 aa15.82■□□□□ 0.12
ABCA8-202ENST00000428549 PELP1Q8IZL8 1130 aaKnown RBP15.8■□□□□ 0.12
ABCA8-202ENST00000428549 RTN4Q9NQC3 1192 aaKnown RBP15.75■□□□□ 0.11
ABCA8-202ENST00000428549 PLPPR3Q6T4P5 718 aa15.73■□□□□ 0.11
ABCA8-202ENST00000428549 APLP2Q06481 763 aa15.68■□□□□ 0.1
ABCA8-202ENST00000428549 FOXD1Q16676 465 aa15.63■□□□□ 0.09
ABCA8-202ENST00000428549 ERICH6Q7L0X2 663 aa15.59■□□□□ 0.09
ABCA8-202ENST00000428549 AMER1Q5JTC6 1135 aaPredicted RBP15.57■□□□□ 0.08
ABCA8-202ENST00000428549 PRKCSHP14314 528 aaPredicted RBP15.47■□□□□ 0.07
ABCA8-202ENST00000428549 UNC13AQ9UPW8 1703 aa15.46■□□□□ 0.06
ABCA8-202ENST00000428549 PABPN1Q86U42 306 aaKnown RBP eCLIP15.43■□□□□ 0.06
ABCA8-202ENST00000428549 SCRIBQ14160 1630 aa15.4■□□□□ 0.06
ABCA8-202ENST00000428549 ARXQ96QS3 562 aa15.38■□□□□ 0.05
ABCA8-202ENST00000428549 BICRAQ9NZM4 1560 aa15.36■□□□□ 0.05
ABCA8-202ENST00000428549 SHROOM4Q9ULL8 1493 aa15.33■□□□□ 0.05
ABCA8-202ENST00000428549 KCNA4P22459 653 aa15.12■□□□□ 0.01
ABCA8-202ENST00000428549 DNAJC5BQ9UF47 199 aa15.07■□□□□ 0
ABCA8-202ENST00000428549 RANGAP1P46060 587 aaPredicted RBP14.99□□□□□ -0.01
ABCA8-202ENST00000428549 CSRNP3Q8WYN3 585 aa14.99□□□□□ -0.01
ABCA8-202ENST00000428549 TIMELESSQ9UNS1 1208 aa14.98□□□□□ -0.01
ABCA8-202ENST00000428549 EIF4G1Q04637 1599 aaKnown RBP14.96□□□□□ -0.01
ABCA8-202ENST00000428549 POTEDQ86YR6 584 aa14.89□□□□□ -0.03
ABCA8-202ENST00000428549 CC2D2AQ9P2K1 1620 aa14.88□□□□□ -0.03
ABCA8-202ENST00000428549 HOMEZQ8IX15 550 aa14.84□□□□□ -0.03
ABCA8-202ENST00000428549 CECR2Q9BXF3 1484 aa14.83□□□□□ -0.04
ABCA8-202ENST00000428549 BAZ1AQ9NRL2 1556 aaPredicted RBP14.79□□□□□ -0.04
ABCA8-202ENST00000428549 PPP6R1Q9UPN7 881 aa14.77□□□□□ -0.04
ABCA8-202ENST00000428549 TAOK2Q9UL54 1235 aa14.76□□□□□ -0.05
ABCA8-202ENST00000428549 TULP1O00294 542 aaPredicted RBP14.74□□□□□ -0.05
ABCA8-202ENST00000428549 SMARCA4P51532 1647 aa14.74□□□□□ -0.05
ABCA8-202ENST00000428549 RSF1Q96T23 1441 aaPredicted RBP14.74□□□□□ -0.05
ABCA8-202ENST00000428549 ADRA2BP18089 450 aa14.73□□□□□ -0.05
ABCA8-202ENST00000428549 MROH2BQ7Z745 1585 aa14.72□□□□□ -0.05
ABCA8-202ENST00000428549 SUPT5HO00267 1087 aaKnown RBP14.68□□□□□ -0.06
ABCA8-202ENST00000428549 NCAPD3P42695 1498 aa14.67□□□□□ -0.06
ABCA8-202ENST00000428549 ATAD2BQ9ULI0 1458 aa14.67□□□□□ -0.06
ABCA8-202ENST00000428549 EIF5BO60841 1220 aaKnown RBP14.66□□□□□ -0.06
ABCA8-202ENST00000428549 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
ABCA8-202ENST00000428549 BCANQ96GW7 911 aa14.63□□□□□ -0.07
ABCA8-202ENST00000428549 PIAS4Q8N2W9 510 aaPredicted RBP14.62□□□□□ -0.07
ABCA8-202ENST00000428549 PEG3Q9GZU2 1588 aa14.6□□□□□ -0.07
ABCA8-202ENST00000428549 WIZO95785 1651 aa14.58□□□□□ -0.07
ABCA8-202ENST00000428549 HMGXB3Q12766 1538 aa14.57□□□□□ -0.08
ABCA8-202ENST00000428549 BAZ1BQ9UIG0 1483 aaKnown RBP14.55□□□□□ -0.08
ABCA8-202ENST00000428549 KLHL34Q8N239 644 aa14.51□□□□□ -0.09
ABCA8-202ENST00000428549 MSH5O43196 834 aa14.5□□□□□ -0.09
ABCA8-202ENST00000428549 TOP2AP11388 1531 aaKnown RBP14.49□□□□□ -0.09
ABCA8-202ENST00000428549 TPRNQ4KMQ1 711 aa14.46□□□□□ -0.09
ABCA8-202ENST00000428549 PODXL2Q9NZ53 605 aa14.44□□□□□ -0.1
ABCA8-202ENST00000428549 GTF3C3Q9Y5Q9 886 aa14.35□□□□□ -0.11
ABCA8-202ENST00000428549 CCDC88BA6NC98 1476 aa14.28□□□□□ -0.12
ABCA8-202ENST00000428549 NESP48681 1621 aa14.26□□□□□ -0.13
ABCA8-202ENST00000428549 CADPSQ9ULU8 1353 aa14.25□□□□□ -0.13
ABCA8-202ENST00000428549 PLCB2Q00722 1185 aa14.25□□□□□ -0.13
ABCA8-202ENST00000428549 LAMC3Q9Y6N6 1575 aa14.25□□□□□ -0.13
ABCA8-202ENST00000428549 ERCC6Q03468 1493 aa14.2□□□□□ -0.14
ABCA8-202ENST00000428549 NPM2Q86SE8 214 aaKnown RBP14.19□□□□□ -0.14
ABCA8-202ENST00000428549 PDS5BQ9NTI5 1447 aa14.19□□□□□ -0.14
ABCA8-202ENST00000428549 SLC4A1APQ9BWU0 796 aaKnown RBP14.18□□□□□ -0.14
ABCA8-202ENST00000428549 CFTRP13569 1480 aa14.16□□□□□ -0.14
ABCA8-202ENST00000428549 FBXO3Q9UK99 471 aa14.11□□□□□ -0.15
ABCA8-202ENST00000428549 HAP1P54257 671 aaPredicted RBP14.08□□□□□ -0.16
ABCA8-202ENST00000428549 FANCD2Q9BXW9 1451 aa14.07□□□□□ -0.16
ABCA8-202ENST00000428549 KIF21AQ7Z4S6 1674 aa14.06□□□□□ -0.16
ABCA8-202ENST00000428549 CEP164Q9UPV0 1460 aa14.04□□□□□ -0.16
ABCA8-202ENST00000428549 PRDM2Q13029 1718 aa14.02□□□□□ -0.16
ABCA8-202ENST00000428549 CUX2O14529 1486 aa14.02□□□□□ -0.17
ABCA8-202ENST00000428549 TMEM132AQ24JP5 1023 aa14.01□□□□□ -0.17
ABCA8-202ENST00000428549 MRC2Q9UBG0 1479 aa14.01□□□□□ -0.17
ABCA8-202ENST00000428549 THOC2Q8NI27 1593 aaKnown RBP13.99□□□□□ -0.17
ABCA8-202ENST00000428549 PLEKHG5O94827 1062 aa13.97□□□□□ -0.17
ABCA8-202ENST00000428549 C14orf37Q86TY3 774 aa13.97□□□□□ -0.17
ABCA8-202ENST00000428549 WDR62O43379 1518 aa13.93□□□□□ -0.18
ABCA8-202ENST00000428549 ABCC8Q09428 1581 aa13.91□□□□□ -0.18
ABCA8-202ENST00000428549 URB2Q14146 1524 aaKnown RBP13.9□□□□□ -0.18
ABCA8-202ENST00000428549 WRNQ14191 1432 aaPredicted RBP eCLIP13.89□□□□□ -0.19
ABCA8-202ENST00000428549 VSIG10Q8N0Z9 540 aa13.86□□□□□ -0.19
ABCA8-202ENST00000428549 TRIM41Q8WV44 630 aa13.86□□□□□ -0.19
ABCA8-202ENST00000428549 TOPBP1Q92547 1522 aa13.84□□□□□ -0.19
ABCA8-202ENST00000428549 BCL11AQ9H165 835 aa13.83□□□□□ -0.2
ABCA8-202ENST00000428549 SYNJ1O43426 1573 aa13.82□□□□□ -0.2
ABCA8-202ENST00000428549 DNMBPQ6XZF7 1577 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms