RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 ANKRD30AQ9BXX3 1397 aa10.53□□□□□ -0.72
LSM8-204ENST00000424702 KANK1Q14678 1352 aa10.52□□□□□ -0.73
LSM8-204ENST00000424702 CHIC2Q9UKJ5 165 aa10.51□□□□□ -0.73
LSM8-204ENST00000424702 FGD6Q6ZV73 1430 aa10.5□□□□□ -0.73
LSM8-204ENST00000424702 ERCC6L2Q5T890 1561 aa10.5□□□□□ -0.73
LSM8-204ENST00000424702 CFAP43Q8NDM7 1665 aa10.49□□□□□ -0.73
LSM8-204ENST00000424702 ITSN2Q9NZM3 1697 aa10.48□□□□□ -0.73
LSM8-204ENST00000424702 CFAP74Q9C0B2 1584 aa10.46□□□□□ -0.73
LSM8-204ENST00000424702 PLCH2O75038 1416 aa10.46□□□□□ -0.74
LSM8-204ENST00000424702 HNRNPMP52272 730 aaKnown RBP eCLIP10.46□□□□□ -0.742e-7■□□□□ 11
LSM8-204ENST00000424702 ZCCHC11Q5TAX3 1644 aaKnown RBP10.46□□□□□ -0.74
LSM8-204ENST00000424702 DENND4BO75064 1496 aaPredicted RBP10.45□□□□□ -0.74
LSM8-204ENST00000424702 FANCAO15360 1455 aa10.45□□□□□ -0.74
LSM8-204ENST00000424702 RRP7BPQ9NSQ0 103 aa10.45□□□□□ -0.74
LSM8-204ENST00000424702 RRBP1Q9P2E9 1410 aaKnown RBP10.45□□□□□ -0.74
LSM8-204ENST00000424702 ADGRL1O94910 1474 aa10.45□□□□□ -0.74
LSM8-204ENST00000424702 SCAPERQ9BY12 1400 aa10.45□□□□□ -0.74
LSM8-204ENST00000424702 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.44□□□□□ -0.742e-9■□□□□ 9.3
LSM8-204ENST00000424702 MAPKBP1O60336 1514 aa10.44□□□□□ -0.74
LSM8-204ENST00000424702 POGZQ7Z3K3 1410 aa10.44□□□□□ -0.74
LSM8-204ENST00000424702 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.44□□□□□ -0.74
LSM8-204ENST00000424702 NEO1Q92859 1461 aa10.43□□□□□ -0.74
LSM8-204ENST00000424702 AKNAQ7Z591 1439 aa10.42□□□□□ -0.74
LSM8-204ENST00000424702 CCDC141Q6ZP82 1450 aa10.42□□□□□ -0.74
LSM8-204ENST00000424702 ADCY10Q96PN6 1610 aa10.42□□□□□ -0.74
LSM8-204ENST00000424702 ABCC10Q5T3U5 1492 aa10.42□□□□□ -0.74
LSM8-204ENST00000424702 STAG3Q9UJ98 1225 aa10.42□□□□□ -0.74
LSM8-204ENST00000424702 SETD5Q9C0A6 1442 aa10.41□□□□□ -0.74
LSM8-204ENST00000424702 NEUROD1Q13562 356 aa10.41□□□□□ -0.74
LSM8-204ENST00000424702 KIAA1107Q9UPP5 1409 aa10.4□□□□□ -0.74
LSM8-204ENST00000424702 GPATCH8Q9UKJ3 1502 aaKnown RBP10.4□□□□□ -0.75
LSM8-204ENST00000424702 CAMSAP2Q08AD1 1489 aa10.39□□□□□ -0.75
LSM8-204ENST00000424702 CLSPNQ9HAW4 1339 aa10.38□□□□□ -0.75
LSM8-204ENST00000424702 ARAP3Q8WWN8 1544 aa10.38□□□□□ -0.75
LSM8-204ENST00000424702 C9orf84Q5VXU9 1444 aa10.38□□□□□ -0.75
LSM8-204ENST00000424702 ZNF518AQ6AHZ1 1483 aa10.38□□□□□ -0.75
LSM8-204ENST00000424702 SLC4A1APQ9BWU0 796 aaKnown RBP10.38□□□□□ -0.75
LSM8-204ENST00000424702 RAB3GAP2Q9H2M9 1393 aa10.37□□□□□ -0.75
LSM8-204ENST00000424702 KIF3BO15066 747 aa10.37□□□□□ -0.75
LSM8-204ENST00000424702 KIF15Q9NS87 1388 aa10.37□□□□□ -0.75
LSM8-204ENST00000424702 MYO5CQ9NQX4 1742 aa10.37□□□□□ -0.75
LSM8-204ENST00000424702 PTPN23Q9H3S7 1636 aa10.37□□□□□ -0.75
LSM8-204ENST00000424702 MLECQ14165 292 aa10.36□□□□□ -0.75
LSM8-204ENST00000424702 MAGI3Q5TCQ9 1506 aa10.36□□□□□ -0.75
LSM8-204ENST00000424702 GGT6Q6P531 493 aa10.36□□□□□ -0.75
LSM8-204ENST00000424702 DAPK1P53355 1430 aa10.35□□□□□ -0.75
LSM8-204ENST00000424702 AFAP1Q8N556 730 aa10.34□□□□□ -0.75
LSM8-204ENST00000424702 ZNF644Q9H582 1327 aaPredicted RBP10.34□□□□□ -0.75
LSM8-204ENST00000424702 GLI2P10070 1586 aa10.34□□□□□ -0.75
LSM8-204ENST00000424702 ROCK1Q13464 1354 aa10.34□□□□□ -0.75
LSM8-204ENST00000424702 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.33□□□□□ -0.76
LSM8-204ENST00000424702 CHGAP10645 457 aaKnown RBP10.33□□□□□ -0.76
LSM8-204ENST00000424702 HDGFP51858 240 aaKnown RBP10.33□□□□□ -0.76
LSM8-204ENST00000424702 PLPPR3Q6T4P5 718 aa10.33□□□□□ -0.76
LSM8-204ENST00000424702 WASHC2CQ9Y4E1 1318 aa10.32□□□□□ -0.76
LSM8-204ENST00000424702 PPP6R1Q9UPN7 881 aa10.32□□□□□ -0.76
LSM8-204ENST00000424702 NUP155O75694 1391 aa10.32□□□□□ -0.76
LSM8-204ENST00000424702 RAPGEF3O95398 923 aa10.32□□□□□ -0.76
LSM8-204ENST00000424702 ABCA9Q8IUA7 1624 aa10.32□□□□□ -0.76
LSM8-204ENST00000424702 ANKRD50Q9ULJ7 1429 aa10.32□□□□□ -0.76
LSM8-204ENST00000424702 TCOF1Q13428 1488 aaKnown RBP10.31□□□□□ -0.76
LSM8-204ENST00000424702 BCANQ96GW7 911 aa10.31□□□□□ -0.76
LSM8-204ENST00000424702 SHANK2Q9UPX8 1470 aa10.31□□□□□ -0.76
LSM8-204ENST00000424702 RTEL1-TNFRSF6BF6WH68 1400 aa10.31□□□□□ -0.76
LSM8-204ENST00000424702 PREX2Q70Z35 1606 aa10.3□□□□□ -0.76
LSM8-204ENST00000424702 SYCP2Q9BX26 1530 aa10.3□□□□□ -0.76
LSM8-204ENST00000424702 TONSLQ96HA7 1378 aa10.3□□□□□ -0.76
LSM8-204ENST00000424702 DHX57Q6P158 1386 aaKnown RBP10.3□□□□□ -0.76
LSM8-204ENST00000424702 MAGI2Q86UL8 1455 aa10.3□□□□□ -0.76
LSM8-204ENST00000424702 ZNF316A6NFI3 1004 aaPredicted RBP10.29□□□□□ -0.76
LSM8-204ENST00000424702 PPP1R15AO75807 674 aaPredicted RBP10.28□□□□□ -0.76
LSM8-204ENST00000424702 TTC37Q6PGP7 1564 aa10.28□□□□□ -0.76
LSM8-204ENST00000424702 ABCC5O15440 1437 aa10.28□□□□□ -0.76
LSM8-204ENST00000424702 DIP2BQ9P265 1576 aa10.28□□□□□ -0.76
LSM8-204ENST00000424702 ARHGEF5Q12774 1597 aa10.27□□□□□ -0.76
LSM8-204ENST00000424702 ZNF326Q5BKZ1 582 aaKnown RBP10.26□□□□□ -0.77
LSM8-204ENST00000424702 ZFYVE16Q7Z3T8 1539 aa10.26□□□□□ -0.77
LSM8-204ENST00000424702 KDM6BO15054 1643 aa10.26□□□□□ -0.77
LSM8-204ENST00000424702 DUOX2Q9NRD8 1548 aa10.26□□□□□ -0.77
LSM8-204ENST00000424702 DHX29Q7Z478 1369 aaKnown RBP10.26□□□□□ -0.77
LSM8-204ENST00000424702 ABCC1P33527 1531 aa10.25□□□□□ -0.77
LSM8-204ENST00000424702 A2MP01023 1474 aa10.25□□□□□ -0.77
LSM8-204ENST00000424702 HFM1A2PYH4 1435 aa10.25□□□□□ -0.77
LSM8-204ENST00000424702 DIEXFQ68CQ4 756 aaKnown RBP10.25□□□□□ -0.77
LSM8-204ENST00000424702 ATP10AO60312 1499 aa10.24□□□□□ -0.77
LSM8-204ENST00000424702 TRAPPC8Q9Y2L5 1435 aa10.24□□□□□ -0.77
LSM8-204ENST00000424702 SIN3AQ96ST3 1273 aa10.24□□□□□ -0.77
LSM8-204ENST00000424702 ERBINQ96RT1 1412 aa10.24□□□□□ -0.77
LSM8-204ENST00000424702 ATP7AQ04656 1500 aa10.24□□□□□ -0.77
LSM8-204ENST00000424702 TSPOAP1O95153 1857 aa10.24□□□□□ -0.77
LSM8-204ENST00000424702 PKD2Q13563 968 aa10.24□□□□□ -0.77
LSM8-204ENST00000424702 DNMT1P26358 1616 aaKnown RBP10.24□□□□□ -0.77
LSM8-204ENST00000424702 CNTLNQ9NXG0 1405 aa10.22□□□□□ -0.77
LSM8-204ENST00000424702 MPHOSPH9Q99550 1183 aa10.22□□□□□ -0.77
LSM8-204ENST00000424702 TIMELESSQ9UNS1 1208 aa10.22□□□□□ -0.77
LSM8-204ENST00000424702 MLH3Q9UHC1 1453 aa10.22□□□□□ -0.77
LSM8-204ENST00000424702 NCOA1Q15788 1441 aa10.22□□□□□ -0.77
LSM8-204ENST00000424702 SAMD9LQ8IVG5 1584 aa10.2□□□□□ -0.78
LSM8-204ENST00000424702 HECW2Q9P2P5 1572 aa10.2□□□□□ -0.78
LSM8-204ENST00000424702 ADGRL2O95490 1459 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms