RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 MAGI3Q5TCQ9 1506 aa7.96□□□□□ -1.14
CNGA1-203ENST00000420489 PREX1Q8TCU6 1659 aa7.96□□□□□ -1.14
CNGA1-203ENST00000420489 GRIN2AQ12879 1464 aa7.96□□□□□ -1.14
CNGA1-203ENST00000420489 UHRF1BP1LA0JNW5 1464 aa7.94□□□□□ -1.14
CNGA1-203ENST00000420489 COL17A1Q9UMD9 1497 aaPredicted RBP7.94□□□□□ -1.14
CNGA1-203ENST00000420489 MIER1Q8N108 512 aa7.93□□□□□ -1.14
CNGA1-203ENST00000420489 ZNF579Q8NAF0 562 aaKnown RBP7.93□□□□□ -1.14
CNGA1-203ENST00000420489 ARAP3Q8WWN8 1544 aa7.93□□□□□ -1.14
CNGA1-203ENST00000420489 KIF21BO75037 1637 aa7.92□□□□□ -1.14
CNGA1-203ENST00000420489 EVX2Q03828 476 aa7.91□□□□□ -1.14
CNGA1-203ENST00000420489 ZRANB1Q9UGI0 708 aa7.91□□□□□ -1.14
CNGA1-203ENST00000420489 ABCA5Q8WWZ7 1642 aa7.9□□□□□ -1.14
CNGA1-203ENST00000420489 PLCD3Q8N3E9 789 aa7.9□□□□□ -1.14
CNGA1-203ENST00000420489 STRCQ7RTU9 1775 aa7.9□□□□□ -1.15
CNGA1-203ENST00000420489 GABBR2O75899 941 aa7.89□□□□□ -1.15
CNGA1-203ENST00000420489 MNX1P50219 401 aaPredicted RBP7.89□□□□□ -1.15
CNGA1-203ENST00000420489 ADAMTS12P58397 1594 aa7.89□□□□□ -1.15
CNGA1-203ENST00000420489 TTC37Q6PGP7 1564 aa7.89□□□□□ -1.15
CNGA1-203ENST00000420489 SOGA1O94964 1423 aa7.88□□□□□ -1.15
CNGA1-203ENST00000420489 MADDQ8WXG6 1647 aa7.87□□□□□ -1.15
CNGA1-203ENST00000420489 ABCC2Q92887 1545 aa7.87□□□□□ -1.15
CNGA1-203ENST00000420489 TOP2AP11388 1531 aaKnown RBP7.86□□□□□ -1.15
CNGA1-203ENST00000420489 PRG4Q92954 1404 aaPredicted RBP7.84□□□□□ -1.15
CNGA1-203ENST00000420489 RIMS1Q86UR5 1692 aaKnown RBP7.81□□□□□ -1.16
CNGA1-203ENST00000420489 LRP5O75197 1615 aa7.8□□□□□ -1.16
CNGA1-203ENST00000420489 FHAD1B1AJZ9 1412 aa7.8□□□□□ -1.16
CNGA1-203ENST00000420489 ASXL2Q76L83 1435 aa7.8□□□□□ -1.16
CNGA1-203ENST00000420489 ABCA10Q8WWZ4 1543 aa7.8□□□□□ -1.16
CNGA1-203ENST00000420489 POGZQ7Z3K3 1410 aa7.8□□□□□ -1.16
CNGA1-203ENST00000420489 RUSC2Q8N2Y8 1516 aa7.78□□□□□ -1.16
CNGA1-203ENST00000420489 SLC34A2O95436 690 aa7.78□□□□□ -1.16
CNGA1-203ENST00000420489 DCBLD2Q96PD2 775 aa7.78□□□□□ -1.16
CNGA1-203ENST00000420489 CDK12Q9NYV4 1490 aaPredicted RBP7.77□□□□□ -1.17
CNGA1-203ENST00000420489 CUX1P39880 1505 aa7.77□□□□□ -1.17
CNGA1-203ENST00000420489 FER1L4A9Z1Z3 1794 aa7.77□□□□□ -1.17
CNGA1-203ENST00000420489 TDRD9Q8NDG6 1382 aaKnown RBP7.77□□□□□ -1.17
CNGA1-203ENST00000420489 CPS1P31327 1500 aa7.77□□□□□ -1.17
CNGA1-203ENST00000420489 VASPP50552 380 aaPredicted RBP7.76□□□□□ -1.17
CNGA1-203ENST00000420489 FAM212AQ96EL1 285 aa7.76□□□□□ -1.17
CNGA1-203ENST00000420489 KDM5BQ9UGL1 1544 aa7.76□□□□□ -1.17
CNGA1-203ENST00000420489 SGIP1Q9BQI5 828 aa7.76□□□□□ -1.17
CNGA1-203ENST00000420489 ERICH3Q5RHP9 1530 aa7.76□□□□□ -1.17
CNGA1-203ENST00000420489 ARHGEF40Q8TER5 1519 aa7.75□□□□□ -1.17
CNGA1-203ENST00000420489 TSPYL2Q9H2G4 693 aaPredicted RBP7.75□□□□□ -1.17
CNGA1-203ENST00000420489 RAD54L2Q9Y4B4 1467 aa7.75□□□□□ -1.17
CNGA1-203ENST00000420489 PHF12Q96QT6 1004 aa7.73□□□□□ -1.17
CNGA1-203ENST00000420489 CCDC61Q9Y6R9 512 aa7.73□□□□□ -1.17
CNGA1-203ENST00000420489 NUBP1P53384 320 aa7.73□□□□□ -1.17
CNGA1-203ENST00000420489 FANCAO15360 1455 aa7.73□□□□□ -1.17
CNGA1-203ENST00000420489 FGD5Q6ZNL6 1462 aa7.72□□□□□ -1.17
CNGA1-203ENST00000420489 PTPRKQ15262 1439 aa7.72□□□□□ -1.17
CNGA1-203ENST00000420489 GSE1Q14687 1217 aa7.72□□□□□ -1.17
CNGA1-203ENST00000420489 KLHL34Q8N239 644 aa7.72□□□□□ -1.17
CNGA1-203ENST00000420489 WIZO95785 1651 aa7.71□□□□□ -1.17
CNGA1-203ENST00000420489 CUL7Q14999 1698 aa7.7□□□□□ -1.18
CNGA1-203ENST00000420489 KIAA0556O60303 1618 aa7.7□□□□□ -1.18
CNGA1-203ENST00000420489 RASEFQ8IZ41 740 aa7.7□□□□□ -1.18
CNGA1-203ENST00000420489 KIF12Q96FN5 646 aa7.7□□□□□ -1.18
CNGA1-203ENST00000420489 NCOA1Q15788 1441 aa7.69□□□□□ -1.18
CNGA1-203ENST00000420489 NEO1Q92859 1461 aa7.69□□□□□ -1.18
CNGA1-203ENST00000420489 ARHGEF12Q9NZN5 1544 aa7.69□□□□□ -1.18
CNGA1-203ENST00000420489 UHRF1BP1Q6BDS2 1440 aa7.69□□□□□ -1.18
CNGA1-203ENST00000420489 SETD1BQ9UPS6 1966 aaKnown RBP7.68□□□□□ -1.18
CNGA1-203ENST00000420489 GALR2O43603 387 aaPredicted RBP7.68□□□□□ -1.18
CNGA1-203ENST00000420489 ZMYM4Q5VZL5 1548 aa7.68□□□□□ -1.18
CNGA1-203ENST00000420489 PLA2R1Q13018 1463 aa7.68□□□□□ -1.18
CNGA1-203ENST00000420489 MAGI2Q86UL8 1455 aa7.68□□□□□ -1.18
CNGA1-203ENST00000420489 JPH4Q96JJ6 628 aa7.67□□□□□ -1.18
CNGA1-203ENST00000420489 DCAF8Q5TAQ9 597 aa7.67□□□□□ -1.18
CNGA1-203ENST00000420489 SPOCK2Q92563 424 aa7.66□□□□□ -1.18
CNGA1-203ENST00000420489 MS4A3Q96HJ5 214 aa7.66□□□□□ -1.18
CNGA1-203ENST00000420489 WDR7Q9Y4E6 1490 aa7.65□□□□□ -1.18
CNGA1-203ENST00000420489 UBAP1LF5GYI3 381 aa7.65□□□□□ -1.18
CNGA1-203ENST00000420489 TIE1P35590 1138 aa7.65□□□□□ -1.18
CNGA1-203ENST00000420489 UPF1Q92900 1129 aaKnown RBP eCLIP7.65□□□□□ -1.19
CNGA1-203ENST00000420489 TOM1O60784 492 aa7.64□□□□□ -1.19
CNGA1-203ENST00000420489 POTEIP0CG38 1075 aa7.64□□□□□ -1.19
CNGA1-203ENST00000420489 SLC39A7Q92504 469 aa7.64□□□□□ -1.19
CNGA1-203ENST00000420489 ASTLQ6HA08 431 aaPredicted RBP7.64□□□□□ -1.19
CNGA1-203ENST00000420489 EFCAB5A4FU69 1503 aa7.63□□□□□ -1.19
CNGA1-203ENST00000420489 LHX8Q68G74 356 aa7.63□□□□□ -1.19
CNGA1-203ENST00000420489 NHSL1Q5SYE7 1610 aa7.62□□□□□ -1.19
CNGA1-203ENST00000420489 ZCCHC11Q5TAX3 1644 aaKnown RBP7.62□□□□□ -1.19
CNGA1-203ENST00000420489 CHRM1P11229 460 aaPredicted RBP7.62□□□□□ -1.19
CNGA1-203ENST00000420489 HSPA1LP34931 641 aa7.62□□□□□ -1.19
CNGA1-203ENST00000420489 RGS17Q9UGC6 210 aaPredicted RBP7.62□□□□□ -1.19
CNGA1-203ENST00000420489 C7P10643 843 aa7.62□□□□□ -1.19
CNGA1-203ENST00000420489 FRMPD1Q5SYB0 1578 aa7.62□□□□□ -1.19
CNGA1-203ENST00000420489 MAP3K13O43283 966 aa7.61□□□□□ -1.19
CNGA1-203ENST00000420489 CD109Q6YHK3 1445 aa7.61□□□□□ -1.19
CNGA1-203ENST00000420489 TNIKQ9UKE5 1360 aa7.61□□□□□ -1.19
CNGA1-203ENST00000420489 ATMINO43313 823 aaPredicted RBP7.61□□□□□ -1.19
CNGA1-203ENST00000420489 HSPA2P54652 639 aa7.61□□□□□ -1.19
CNGA1-203ENST00000420489 CFAP74Q9C0B2 1584 aa7.61□□□□□ -1.19
CNGA1-203ENST00000420489 PCDHB13Q9Y5F0 798 aa7.6□□□□□ -1.19
CNGA1-203ENST00000420489 AKNAQ7Z591 1439 aa7.6□□□□□ -1.19
CNGA1-203ENST00000420489 ZNF142P52746 1687 aaPredicted RBP7.6□□□□□ -1.19
CNGA1-203ENST00000420489 UACAQ9BZF9 1416 aa7.6□□□□□ -1.19
CNGA1-203ENST00000420489 PTPRGP23470 1445 aa7.59□□□□□ -1.19
CNGA1-203ENST00000420489 SYNMO15061 1565 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms