RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 AEBP2Q6ZN18 517 aaPredicted RBP15.37■□□□□ 0.05
CNGA1-203ENST00000420489 CHIC1Q5VXU3 224 aa14.92□□□□□ -0.02
CNGA1-203ENST00000420489 SENP3Q9H4L4 574 aaPredicted RBP13.32□□□□□ -0.28
CNGA1-203ENST00000420489 PHF23Q9BUL5 403 aaPredicted RBP13.05□□□□□ -0.32
CNGA1-203ENST00000420489 FOXD1Q16676 465 aa12.23□□□□□ -0.45
CNGA1-203ENST00000420489 PLPPR3Q6T4P5 718 aa12.06□□□□□ -0.48
CNGA1-203ENST00000420489 MSH5O43196 834 aa11.59□□□□□ -0.55
CNGA1-203ENST00000420489 PIAS4Q8N2W9 510 aaPredicted RBP11.51□□□□□ -0.57
CNGA1-203ENST00000420489 ADRA2BP18089 450 aa11.48□□□□□ -0.57
CNGA1-203ENST00000420489 PPP6R1Q9UPN7 881 aa11.46□□□□□ -0.58
CNGA1-203ENST00000420489 DNAJC5Q9H3Z4 198 aa11.21□□□□□ -0.62
CNGA1-203ENST00000420489 DNAJC5BQ9UF47 199 aa10.87□□□□□ -0.67
CNGA1-203ENST00000420489 POTEDQ86YR6 584 aa10.84□□□□□ -0.67
CNGA1-203ENST00000420489 SCAF1Q9H7N4 1312 aaKnown RBP10.8□□□□□ -0.68
CNGA1-203ENST00000420489 NISCHQ9Y2I1 1504 aa10.78□□□□□ -0.68
CNGA1-203ENST00000420489 ABCC9O60706 1549 aa10.67□□□□□ -0.7
CNGA1-203ENST00000420489 DMRT2Q9Y5R5 561 aa10.55□□□□□ -0.72
CNGA1-203ENST00000420489 PPP4R3CPQ6ZMV5 832 aa10.53□□□□□ -0.72
CNGA1-203ENST00000420489 MAPK8IP2Q13387 824 aaPredicted RBP10.45□□□□□ -0.74
CNGA1-203ENST00000420489 CCDC180Q9P1Z9 1646 aa10.39□□□□□ -0.75
CNGA1-203ENST00000420489 CNKSR2Q8WXI2 1034 aa10.37□□□□□ -0.75
CNGA1-203ENST00000420489 NCBP3Q53F19 620 aaKnown RBP10.34□□□□□ -0.75
CNGA1-203ENST00000420489 CUX2O14529 1486 aa10.29□□□□□ -0.76
CNGA1-203ENST00000420489 HOXD11P31277 338 aaPredicted RBP10.23□□□□□ -0.77
CNGA1-203ENST00000420489 RNF216Q9NWF9 866 aaPredicted RBP10.23□□□□□ -0.77
CNGA1-203ENST00000420489 RB1CC1Q8TDY2 1594 aa10.22□□□□□ -0.77
CNGA1-203ENST00000420489 SHROOM4Q9ULL8 1493 aa10.22□□□□□ -0.77
CNGA1-203ENST00000420489 DCAF8L1A6NGE4 600 aa10.03□□□□□ -0.8
CNGA1-203ENST00000420489 NACADO15069 1562 aa9.98□□□□□ -0.81
CNGA1-203ENST00000420489 NPM3O75607 178 aaKnown RBP9.98□□□□□ -0.81
CNGA1-203ENST00000420489 CECR2Q9BXF3 1484 aa9.97□□□□□ -0.81
CNGA1-203ENST00000420489 CC2D2AQ9P2K1 1620 aa9.87□□□□□ -0.83
CNGA1-203ENST00000420489 KCNA4P22459 653 aa9.87□□□□□ -0.83
CNGA1-203ENST00000420489 BICRAQ9NZM4 1560 aa9.81□□□□□ -0.84
CNGA1-203ENST00000420489 UNC13AQ9UPW8 1703 aa9.79□□□□□ -0.84
CNGA1-203ENST00000420489 RNF39Q9H2S5 420 aa9.78□□□□□ -0.84
CNGA1-203ENST00000420489 MYO15BQ96JP2 1530 aa9.76□□□□□ -0.85
CNGA1-203ENST00000420489 C1QBPQ07021 282 aaKnown RBP9.75□□□□□ -0.85
CNGA1-203ENST00000420489 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.75□□□□□ -0.85
CNGA1-203ENST00000420489 CACNB1Q02641 598 aaPredicted RBP9.74□□□□□ -0.85
CNGA1-203ENST00000420489 TRIM41Q8WV44 630 aa9.69□□□□□ -0.86
CNGA1-203ENST00000420489 PABPN1Q86U42 306 aaKnown RBP eCLIP9.67□□□□□ -0.86
CNGA1-203ENST00000420489 EIF4G1Q04637 1599 aaKnown RBP9.64□□□□□ -0.87
CNGA1-203ENST00000420489 APLP2Q06481 763 aa9.56□□□□□ -0.88
CNGA1-203ENST00000420489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.5□□□□□ -0.89
CNGA1-203ENST00000420489 HNRNPUL2Q1KMD3 747 aaKnown RBP9.5□□□□□ -0.89
CNGA1-203ENST00000420489 ILDR1Q86SU0 546 aaPredicted RBP9.49□□□□□ -0.89
CNGA1-203ENST00000420489 U3KPZ7 1027 aaPredicted RBP9.47□□□□□ -0.89
CNGA1-203ENST00000420489 SLC4A1APQ9BWU0 796 aaKnown RBP9.47□□□□□ -0.89
CNGA1-203ENST00000420489 SLC4A2P04920 1241 aa9.44□□□□□ -0.9
CNGA1-203ENST00000420489 ERCC6Q03468 1493 aa9.44□□□□□ -0.9
CNGA1-203ENST00000420489 THOC2Q8NI27 1593 aaKnown RBP9.41□□□□□ -0.9
CNGA1-203ENST00000420489 SAMD1Q6SPF0 538 aaPredicted RBP9.4□□□□□ -0.9
CNGA1-203ENST00000420489 MYCNP04198 464 aaPredicted RBP9.35□□□□□ -0.91
CNGA1-203ENST00000420489 RIMBP3CA6NJZ7 1639 aa9.31□□□□□ -0.92
CNGA1-203ENST00000420489 RIMBP3BA6NNM3 1639 aa9.31□□□□□ -0.92
CNGA1-203ENST00000420489 RIMBP3Q9UFD9 1639 aa9.31□□□□□ -0.92
CNGA1-203ENST00000420489 CAPN15O75808 1086 aa9.31□□□□□ -0.92
CNGA1-203ENST00000420489 BAZ1AQ9NRL2 1556 aaPredicted RBP9.31□□□□□ -0.92
CNGA1-203ENST00000420489 FOXD4L1Q9NU39 408 aa9.31□□□□□ -0.92
CNGA1-203ENST00000420489 ZNF219Q9P2Y4 722 aaPredicted RBP9.3□□□□□ -0.92
CNGA1-203ENST00000420489 ERCC6L2Q5T890 1561 aa9.29□□□□□ -0.92
CNGA1-203ENST00000420489 SPINK5Q9NQ38 1064 aaPredicted RBP9.21□□□□□ -0.93
CNGA1-203ENST00000420489 OSCARQ8IYS5 282 aa9.2□□□□□ -0.94
CNGA1-203ENST00000420489 DSG3P32926 999 aa9.19□□□□□ -0.94
CNGA1-203ENST00000420489 SOCS7O14512 581 aa9.18□□□□□ -0.94
CNGA1-203ENST00000420489 TRHP20396 242 aaPredicted RBP9.16□□□□□ -0.94
CNGA1-203ENST00000420489 LAMC3Q9Y6N6 1575 aa9.14□□□□□ -0.95
CNGA1-203ENST00000420489 ARHGEF11O15085 1522 aa9.13□□□□□ -0.95
CNGA1-203ENST00000420489 NCAPD3P42695 1498 aa9.12□□□□□ -0.95
CNGA1-203ENST00000420489 ATXN8OSP0DMR3 200 aa9.12□□□□□ -0.95
CNGA1-203ENST00000420489 DCAF1Q9Y4B6 1507 aa9.11□□□□□ -0.95
CNGA1-203ENST00000420489 FBXO41Q8TF61 875 aa9.11□□□□□ -0.95
CNGA1-203ENST00000420489 WDR62O43379 1518 aa9.09□□□□□ -0.95
CNGA1-203ENST00000420489 LMTK3Q96Q04 1460 aa9.07□□□□□ -0.96
CNGA1-203ENST00000420489 HMGXB3Q12766 1538 aa9.05□□□□□ -0.96
CNGA1-203ENST00000420489 RSF1Q96T23 1441 aaPredicted RBP9.03□□□□□ -0.96
CNGA1-203ENST00000420489 ZBTB12Q9Y330 459 aaPredicted RBP9.03□□□□□ -0.96
CNGA1-203ENST00000420489 ABCB7O75027 752 aa9.01□□□□□ -0.97
CNGA1-203ENST00000420489 ZBTB22O15209 634 aa9□□□□□ -0.97
CNGA1-203ENST00000420489 PDS5BQ9NTI5 1447 aa8.99□□□□□ -0.97
CNGA1-203ENST00000420489 MRC2Q9UBG0 1479 aa8.98□□□□□ -0.97
CNGA1-203ENST00000420489 POLA2Q14181 598 aa8.96□□□□□ -0.98
CNGA1-203ENST00000420489 RBM42Q9BTD8 480 aaKnown RBP8.94□□□□□ -0.98
CNGA1-203ENST00000420489 ARAP1Q96P48 1450 aa8.94□□□□□ -0.98
CNGA1-203ENST00000420489 KIF21AQ7Z4S6 1674 aa8.92□□□□□ -0.98
CNGA1-203ENST00000420489 ATF5Q9Y2D1 282 aaPredicted RBP8.89□□□□□ -0.99
CNGA1-203ENST00000420489 SMARCA2P51531 1590 aa8.88□□□□□ -0.99
CNGA1-203ENST00000420489 SCRIBQ14160 1630 aa8.86□□□□□ -0.99
CNGA1-203ENST00000420489 FBLN2P98095 1184 aa8.82□□□□□ -1
CNGA1-203ENST00000420489 CSRNP3Q8WYN3 585 aa8.81□□□□□ -1
CNGA1-203ENST00000420489 NESP48681 1621 aa8.81□□□□□ -1
CNGA1-203ENST00000420489 HECW2Q9P2P5 1572 aa8.8□□□□□ -1
CNGA1-203ENST00000420489 EHMT2Q96KQ7 1210 aa8.74□□□□□ -1.01
CNGA1-203ENST00000420489 ATAD2BQ9ULI0 1458 aa8.74□□□□□ -1.01
CNGA1-203ENST00000420489 SPATA31D1Q6ZQQ2 1576 aa8.74□□□□□ -1.01
CNGA1-203ENST00000420489 AKT1S1Q96B36 256 aa8.73□□□□□ -1.01
CNGA1-203ENST00000420489 PEG3Q9GZU2 1588 aa8.72□□□□□ -1.01
CNGA1-203ENST00000420489 CYB5RLQ6IPT4 315 aa8.72□□□□□ -1.01
CNGA1-203ENST00000420489 KDM4FA0A1W2PPD8 638 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms