RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 MAGI1Q96QZ7 1491 aaPredicted RBP12.69□□□□□ -0.38
SP140-204ENST00000417495 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.69□□□□□ -0.38
SP140-204ENST00000417495 PCF11O94913 1555 aaKnown RBP12.67□□□□□ -0.38
SP140-204ENST00000417495 CHGAP10645 457 aaKnown RBP12.67□□□□□ -0.38
SP140-204ENST00000417495 EIF4G3O43432 1585 aaKnown RBP12.66□□□□□ -0.38
SP140-204ENST00000417495 IQGAP2Q13576 1575 aa12.66□□□□□ -0.38
SP140-204ENST00000417495 SNAPC4Q5SXM2 1469 aa12.66□□□□□ -0.38
SP140-204ENST00000417495 RNF216Q9NWF9 866 aaPredicted RBP12.64□□□□□ -0.39
SP140-204ENST00000417495 FGD1P98174 961 aa12.64□□□□□ -0.39
SP140-204ENST00000417495 LRRC9Q6ZRR7 1453 aa12.64□□□□□ -0.39
SP140-204ENST00000417495 SPDYE4A6NLX3 237 aa12.62□□□□□ -0.39
SP140-204ENST00000417495 CCDC18Q5T9S5 1454 aa12.62□□□□□ -0.39
SP140-204ENST00000417495 KIAA0586Q9BVV6 1533 aa12.61□□□□□ -0.39
SP140-204ENST00000417495 ARID3CA6NKF2 412 aa12.61□□□□□ -0.39
SP140-204ENST00000417495 TDRD9Q8NDG6 1382 aaKnown RBP12.6□□□□□ -0.39
SP140-204ENST00000417495 HECW1Q76N89 1606 aa12.59□□□□□ -0.39
SP140-204ENST00000417495 SYNJ2O15056 1496 aa12.58□□□□□ -0.4
SP140-204ENST00000417495 TAF7LQ5H9L4 462 aa12.58□□□□□ -0.4
SP140-204ENST00000417495 PROM2Q8N271 834 aa12.58□□□□□ -0.4
SP140-204ENST00000417495 ARHGEF11O15085 1522 aa12.58□□□□□ -0.4
SP140-204ENST00000417495 ERCC6Q03468 1493 aa12.57□□□□□ -0.4
SP140-204ENST00000417495 GRIN2AQ12879 1464 aa12.57□□□□□ -0.4
SP140-204ENST00000417495 EHBP1L1Q8N3D4 1523 aa12.57□□□□□ -0.4
SP140-204ENST00000417495 LRRIQ1Q96JM4 1722 aa12.56□□□□□ -0.4
SP140-204ENST00000417495 GLIPR1L2Q4G1C9 344 aa12.55□□□□□ -0.4
SP140-204ENST00000417495 NUP160Q12769 1436 aa12.55□□□□□ -0.4
SP140-204ENST00000417495 KIAA0556O60303 1618 aa12.55□□□□□ -0.4
SP140-204ENST00000417495 ZNF428Q96B54 188 aa12.53□□□□□ -0.4
SP140-204ENST00000417495 ZNF608Q9ULD9 1512 aaPredicted RBP12.53□□□□□ -0.4
SP140-204ENST00000417495 SUPT6HQ7KZ85 1726 aaKnown RBP12.52□□□□□ -0.4
SP140-204ENST00000417495 DEKP35659 375 aaKnown RBP12.52□□□□□ -0.4
SP140-204ENST00000417495 NEUROD2Q15784 382 aa12.52□□□□□ -0.4
SP140-204ENST00000417495 CCNB3Q8WWL7 1395 aa12.52□□□□□ -0.41
SP140-204ENST00000417495 FHOD3Q2V2M9 1422 aa12.51□□□□□ -0.41
SP140-204ENST00000417495 BCL11BQ9C0K0 894 aaPredicted RBP12.5□□□□□ -0.41
SP140-204ENST00000417495 NKX1-1Q15270 411 aaPredicted RBP12.49□□□□□ -0.41
SP140-204ENST00000417495 DISP1Q96F81 1524 aa12.48□□□□□ -0.41
SP140-204ENST00000417495 AAMPQ13685 434 aa12.48□□□□□ -0.41
SP140-204ENST00000417495 CEP170Q5SW79 1584 aa12.48□□□□□ -0.41
SP140-204ENST00000417495 TCOF1Q13428 1488 aaKnown RBP12.48□□□□□ -0.41
SP140-204ENST00000417495 DIEXFQ68CQ4 756 aaKnown RBP12.48□□□□□ -0.41
SP140-204ENST00000417495 ADCY10Q96PN6 1610 aa12.47□□□□□ -0.41
SP140-204ENST00000417495 LMOD2Q6P5Q4 547 aa12.47□□□□□ -0.41
SP140-204ENST00000417495 MKRN4PQ13434 485 aaPredicted RBP12.46□□□□□ -0.41
SP140-204ENST00000417495 SHROOM2Q13796 1616 aa12.45□□□□□ -0.42
SP140-204ENST00000417495 RAPGEF6Q8TEU7 1601 aa12.45□□□□□ -0.42
SP140-204ENST00000417495 KANK4Q5T7N3 995 aaPredicted RBP12.45□□□□□ -0.42
SP140-204ENST00000417495 AKNAQ7Z591 1439 aa12.45□□□□□ -0.42
SP140-204ENST00000417495 ZMYND15Q9H091 742 aa12.43□□□□□ -0.42
SP140-204ENST00000417495 SUPT16HQ9Y5B9 1047 aaKnown RBP12.43□□□□□ -0.42
SP140-204ENST00000417495 EPRSP07814 1512 aaKnown RBP12.43□□□□□ -0.42
SP140-204ENST00000417495 MIA2Q96PC5 1412 aa12.43□□□□□ -0.42
SP140-204ENST00000417495 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.42□□□□□ -0.42
SP140-204ENST00000417495 CCDC9Q9Y3X0 531 aaKnown RBP12.42□□□□□ -0.42
SP140-204ENST00000417495 SLC24A3Q9HC58 644 aa12.41□□□□□ -0.42
SP140-204ENST00000417495 FGD6Q6ZV73 1430 aa12.4□□□□□ -0.42
SP140-204ENST00000417495 MYOM3Q5VTT5 1437 aa12.4□□□□□ -0.42
SP140-204ENST00000417495 PHLDB1Q86UU1 1377 aa12.4□□□□□ -0.42
SP140-204ENST00000417495 ABCA8O94911 1581 aa12.39□□□□□ -0.43
SP140-204ENST00000417495 NCOA2Q15596 1464 aa12.39□□□□□ -0.43
SP140-204ENST00000417495 CARMIL2Q6F5E8 1435 aa12.38□□□□□ -0.43
SP140-204ENST00000417495 RSPH6AQ9H0K4 717 aa12.38□□□□□ -0.43
SP140-204ENST00000417495 GCC2Q8IWJ2 1684 aa12.38□□□□□ -0.43
SP140-204ENST00000417495 ITSN2Q9NZM3 1697 aa12.37□□□□□ -0.43
SP140-204ENST00000417495 A0A0U1RQG5 324 aaPredicted RBP12.37□□□□□ -0.43
SP140-204ENST00000417495 RBM10P98175 930 aaKnown RBP12.37□□□□□ -0.43
SP140-204ENST00000417495 PTPN23Q9H3S7 1636 aa12.37□□□□□ -0.43
SP140-204ENST00000417495 MAGI3Q5TCQ9 1506 aa12.36□□□□□ -0.43
SP140-204ENST00000417495 CCER1Q8TC90 406 aaPredicted RBP12.36□□□□□ -0.43
SP140-204ENST00000417495 DHX57Q6P158 1386 aaKnown RBP12.35□□□□□ -0.43
SP140-204ENST00000417495 SETD5Q9C0A6 1442 aa12.35□□□□□ -0.43
SP140-204ENST00000417495 NUP153P49790 1475 aaKnown RBP12.35□□□□□ -0.43
SP140-204ENST00000417495 BRD2P25440 801 aaKnown RBP12.34□□□□□ -0.43
SP140-204ENST00000417495 CHD1O14646 1710 aa12.33□□□□□ -0.43
SP140-204ENST00000417495 MTUS2Q5JR59 1369 aa12.33□□□□□ -0.44
SP140-204ENST00000417495 HFM1A2PYH4 1435 aa12.32□□□□□ -0.44
SP140-204ENST00000417495 CHMP4AQ9BY43 222 aa12.32□□□□□ -0.44
SP140-204ENST00000417495 SPOCK2Q92563 424 aa12.32□□□□□ -0.44
SP140-204ENST00000417495 ZNF326Q5BKZ1 582 aaKnown RBP12.31□□□□□ -0.44
SP140-204ENST00000417495 RBM19Q9Y4C8 960 aaKnown RBP12.31□□□□□ -0.44
SP140-204ENST00000417495 CLASP1Q7Z460 1538 aa12.31□□□□□ -0.44
SP140-204ENST00000417495 RNF25Q96BH1 459 aaPredicted RBP12.31□□□□□ -0.44
SP140-204ENST00000417495 DNMT1P26358 1616 aaKnown RBP12.29□□□□□ -0.44
SP140-204ENST00000417495 GPBP1L1Q9HC44 474 aaPredicted RBP12.29□□□□□ -0.44
SP140-204ENST00000417495 APBB1O00213 710 aa12.29□□□□□ -0.44
SP140-204ENST00000417495 TROQ12816 1431 aaPredicted RBP12.29□□□□□ -0.44
SP140-204ENST00000417495 RSPH4AQ5TD94 716 aa12.29□□□□□ -0.44
SP140-204ENST00000417495 ROCK1Q13464 1354 aa12.29□□□□□ -0.44
SP140-204ENST00000417495 FANCIQ9NVI1 1328 aa12.28□□□□□ -0.44
SP140-204ENST00000417495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.28□□□□□ -0.44
SP140-204ENST00000417495 MSH5O43196 834 aa12.28□□□□□ -0.44
SP140-204ENST00000417495 KCNV2Q8TDN2 545 aa12.28□□□□□ -0.44
SP140-204ENST00000417495 GTPBP6O43824 516 aaPredicted RBP12.28□□□□□ -0.44
SP140-204ENST00000417495 ZBTB7CA1YPR0 619 aa12.27□□□□□ -0.45
SP140-204ENST00000417495 CROCC2H7BZ55 1655 aa12.27□□□□□ -0.45
SP140-204ENST00000417495 ADGBQ8N7X0 1667 aa12.27□□□□□ -0.45
SP140-204ENST00000417495 UHRF1BP1LA0JNW5 1464 aa12.26□□□□□ -0.45
SP140-204ENST00000417495 MAPKBP1O60336 1514 aa12.26□□□□□ -0.45
SP140-204ENST00000417495 CHMP7Q8WUX9 453 aaPredicted RBP12.26□□□□□ -0.45
SP140-204ENST00000417495 ZC3H15Q8WU90 426 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms