RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 CHIC1Q5VXU3 224 aa18.75■□□□□ 0.59
SP140-204ENST00000417495 NISCHQ9Y2I1 1504 aa18.54■□□□□ 0.56
SP140-204ENST00000417495 AEBP2Q6ZN18 517 aaPredicted RBP18.17■□□□□ 0.5
SP140-204ENST00000417495 SLC24A1O60721 1099 aa17.26■□□□□ 0.35
SP140-204ENST00000417495 EHMT2Q96KQ7 1210 aa17.26■□□□□ 0.35
SP140-204ENST00000417495 PHF23Q9BUL5 403 aaPredicted RBP17.14■□□□□ 0.33
SP140-204ENST00000417495 PLPPR3Q6T4P5 718 aa16.66■□□□□ 0.26
SP140-204ENST00000417495 CCDC180Q9P1Z9 1646 aa16.33■□□□□ 0.2
SP140-204ENST00000417495 RTN4Q9NQC3 1192 aaKnown RBP16.26■□□□□ 0.19
SP140-204ENST00000417495 KCNA4P22459 653 aa16.19■□□□□ 0.18
SP140-204ENST00000417495 CSRNP3Q8WYN3 585 aa16.13■□□□□ 0.17
SP140-204ENST00000417495 PELP1Q8IZL8 1130 aaKnown RBP16.09■□□□□ 0.17
SP140-204ENST00000417495 MYT1Q01538 1121 aa16■□□□□ 0.15
SP140-204ENST00000417495 ZCCHC6Q5VYS8 1495 aaKnown RBP15.68■□□□□ 0.1
SP140-204ENST00000417495 DCAF1Q9Y4B6 1507 aa15.63■□□□□ 0.09
SP140-204ENST00000417495 TTBK1Q5TCY1 1321 aaPredicted RBP15.53■□□□□ 0.08
SP140-204ENST00000417495 ADRA2BP18089 450 aa15.51■□□□□ 0.07
SP140-204ENST00000417495 AMER1Q5JTC6 1135 aaPredicted RBP15.49■□□□□ 0.07
SP140-204ENST00000417495 PRKCSHP14314 528 aaPredicted RBP15.42■□□□□ 0.06
SP140-204ENST00000417495 MYO15BQ96JP2 1530 aa15.41■□□□□ 0.06
SP140-204ENST00000417495 SLC4A1APQ9BWU0 796 aaKnown RBP15.34■□□□□ 0.05
SP140-204ENST00000417495 NCBP3Q53F19 620 aaKnown RBP15.29■□□□□ 0.04
SP140-204ENST00000417495 ZBTB22O15209 634 aa15.15■□□□□ 0.02
SP140-204ENST00000417495 NACADO15069 1562 aa15.04■□□□□ -0
SP140-204ENST00000417495 DAXXQ9UER7 740 aaPredicted RBP14.98□□□□□ -0.01
SP140-204ENST00000417495 TIMELESSQ9UNS1 1208 aa14.82□□□□□ -0.04
SP140-204ENST00000417495 ERICH6Q7L0X2 663 aa14.81□□□□□ -0.04
SP140-204ENST00000417495 RB1CC1Q8TDY2 1594 aa14.78□□□□□ -0.04
SP140-204ENST00000417495 APLP2Q06481 763 aa14.76□□□□□ -0.05
SP140-204ENST00000417495 PPP6R1Q9UPN7 881 aa14.76□□□□□ -0.05
SP140-204ENST00000417495 ABCC9O60706 1549 aa14.73□□□□□ -0.05
SP140-204ENST00000417495 TAOK2Q9UL54 1235 aa14.71□□□□□ -0.05
SP140-204ENST00000417495 SHROOM4Q9ULL8 1493 aa14.67□□□□□ -0.06
SP140-204ENST00000417495 SCRIBQ14160 1630 aa14.59□□□□□ -0.07
SP140-204ENST00000417495 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
SP140-204ENST00000417495 TULP1O00294 542 aaPredicted RBP14.55□□□□□ -0.08
SP140-204ENST00000417495 TPRNQ4KMQ1 711 aa14.53□□□□□ -0.08
SP140-204ENST00000417495 DCAF8L2P0C7V8 631 aa14.52□□□□□ -0.09
SP140-204ENST00000417495 PLCB2Q00722 1185 aa14.48□□□□□ -0.09
SP140-204ENST00000417495 UNC13AQ9UPW8 1703 aa14.46□□□□□ -0.09
SP140-204ENST00000417495 SENP3Q9H4L4 574 aaPredicted RBP14.41□□□□□ -0.1
SP140-204ENST00000417495 FKBP8Q14318 412 aa14.38□□□□□ -0.11
SP140-204ENST00000417495 BCANQ96GW7 911 aa14.37□□□□□ -0.11
SP140-204ENST00000417495 RSF1Q96T23 1441 aaPredicted RBP14.37□□□□□ -0.11
SP140-204ENST00000417495 BAZ1AQ9NRL2 1556 aaPredicted RBP14.34□□□□□ -0.11
SP140-204ENST00000417495 HAP1P54257 671 aaPredicted RBP14.34□□□□□ -0.11
SP140-204ENST00000417495 BCL11AQ9H165 835 aa14.34□□□□□ -0.11
SP140-204ENST00000417495 PPP4R3CPQ6ZMV5 832 aa14.3□□□□□ -0.12
SP140-204ENST00000417495 ARXQ96QS3 562 aa14.3□□□□□ -0.12
SP140-204ENST00000417495 HRCP23327 699 aa14.29□□□□□ -0.12
SP140-204ENST00000417495 BICRAQ9NZM4 1560 aa14.28□□□□□ -0.12
SP140-204ENST00000417495 SUPT5HO00267 1087 aaKnown RBP14.24□□□□□ -0.13
SP140-204ENST00000417495 PEG3Q9GZU2 1588 aa14.23□□□□□ -0.13
SP140-204ENST00000417495 SMARCA4P51532 1647 aa14.22□□□□□ -0.13
SP140-204ENST00000417495 MROH2BQ7Z745 1585 aa14.2□□□□□ -0.14
SP140-204ENST00000417495 CECR2Q9BXF3 1484 aa14.16□□□□□ -0.14
SP140-204ENST00000417495 TOP2AP11388 1531 aaKnown RBP14.13□□□□□ -0.15
SP140-204ENST00000417495 SCAF1Q9H7N4 1312 aaKnown RBP14.12□□□□□ -0.15
SP140-204ENST00000417495 KDM2AQ9Y2K7 1162 aa14.09□□□□□ -0.15
SP140-204ENST00000417495 FAM9AQ8IZU1 332 aaPredicted RBP14.09□□□□□ -0.15
SP140-204ENST00000417495 WIZO95785 1651 aa14.09□□□□□ -0.15
SP140-204ENST00000417495 EIF4G1Q04637 1599 aaKnown RBP14.07□□□□□ -0.16
SP140-204ENST00000417495 FBLN2P98095 1184 aa14.05□□□□□ -0.16
SP140-204ENST00000417495 GTF3C3Q9Y5Q9 886 aa14□□□□□ -0.17
SP140-204ENST00000417495 SMARCA2P51531 1590 aa13.98□□□□□ -0.17
SP140-204ENST00000417495 FOXD4L1Q9NU39 408 aa13.95□□□□□ -0.18
SP140-204ENST00000417495 HOMEZQ8IX15 550 aa13.92□□□□□ -0.18
SP140-204ENST00000417495 KLHL34Q8N239 644 aa13.91□□□□□ -0.18
SP140-204ENST00000417495 HMGXB3Q12766 1538 aa13.9□□□□□ -0.18
SP140-204ENST00000417495 CENPBP07199 599 aaPredicted RBP13.86□□□□□ -0.19
SP140-204ENST00000417495 ATAD2BQ9ULI0 1458 aa13.86□□□□□ -0.19
SP140-204ENST00000417495 PODXL2Q9NZ53 605 aa13.86□□□□□ -0.19
SP140-204ENST00000417495 EIF5BO60841 1220 aaKnown RBP13.84□□□□□ -0.19
SP140-204ENST00000417495 CCDC88BA6NC98 1476 aa13.83□□□□□ -0.2
SP140-204ENST00000417495 NCAPD3P42695 1498 aa13.8□□□□□ -0.2
SP140-204ENST00000417495 VSIG10Q8N0Z9 540 aa13.77□□□□□ -0.2
SP140-204ENST00000417495 BAZ1BQ9UIG0 1483 aaKnown RBP13.75□□□□□ -0.21
SP140-204ENST00000417495 TMEM132AQ24JP5 1023 aa13.73□□□□□ -0.21
SP140-204ENST00000417495 PRDM2Q13029 1718 aa13.69□□□□□ -0.22
SP140-204ENST00000417495 FOXD1Q16676 465 aa13.69□□□□□ -0.22
SP140-204ENST00000417495 PABPN1Q86U42 306 aaKnown RBP eCLIP13.67□□□□□ -0.22
SP140-204ENST00000417495 EEA1Q15075 1411 aa13.66□□□□□ -0.22
SP140-204ENST00000417495 RANGAP1P46060 587 aaPredicted RBP13.59□□□□□ -0.23
SP140-204ENST00000417495 PPARGC1BQ86YN6 1023 aaKnown RBP13.59□□□□□ -0.23
SP140-204ENST00000417495 BIVM-ERCC5R4GMW8 1640 aa13.58□□□□□ -0.24
SP140-204ENST00000417495 TRIM41Q8WV44 630 aa13.57□□□□□ -0.24
SP140-204ENST00000417495 C14orf37Q86TY3 774 aa13.56□□□□□ -0.24
SP140-204ENST00000417495 TOP2BQ02880 1626 aa13.52□□□□□ -0.24
SP140-204ENST00000417495 CFTRP13569 1480 aa13.52□□□□□ -0.25
SP140-204ENST00000417495 ANP32EQ9BTT0 268 aa13.52□□□□□ -0.25
SP140-204ENST00000417495 WRNQ14191 1432 aaPredicted RBP eCLIP13.49□□□□□ -0.25
SP140-204ENST00000417495 ACIN1Q9UKV3 1341 aaKnown RBP13.49□□□□□ -0.25
SP140-204ENST00000417495 UBE2Q2Q8WVN8 375 aa13.47□□□□□ -0.25
SP140-204ENST00000417495 ABCC8Q09428 1581 aa13.47□□□□□ -0.25
SP140-204ENST00000417495 TRIM26Q12899 539 aaPredicted RBP13.47□□□□□ -0.25
SP140-204ENST00000417495 CC2D2AQ9P2K1 1620 aa13.47□□□□□ -0.25
SP140-204ENST00000417495 UBTFP17480 764 aaKnown RBP13.46□□□□□ -0.25
SP140-204ENST00000417495 KIF21BO75037 1637 aa13.45□□□□□ -0.26
SP140-204ENST00000417495 SYNJ1O43426 1573 aa13.45□□□□□ -0.26
SP140-204ENST00000417495 NPM1P06748 294 aaKnown RBP eCLIP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms