RNA–Protein interactions for RNA: ENST00000398809.8

CDH23-205, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-205ENST00000398809 ROCK2O75116 1388 aaKnown RBP22.18■■□□□ 1.14
CDH23-205ENST00000398809 SRPK2P78362 688 aaKnown RBP22.17■■□□□ 1.14
CDH23-205ENST00000398809 PDS5BQ9NTI5 1447 aa22.15■■□□□ 1.14
CDH23-205ENST00000398809 GLIPR1L2Q4G1C9 344 aa22.15■■□□□ 1.14
CDH23-205ENST00000398809 ANKRD30AQ9BXX3 1397 aa22.15■■□□□ 1.14
CDH23-205ENST00000398809 RALBP1Q15311 655 aa22.15■■□□□ 1.14
CDH23-205ENST00000398809 HNRNPMP52272 730 aaKnown RBP eCLIP22.14■■□□□ 1.14
CDH23-205ENST00000398809 KANK1Q14678 1352 aa22.14■■□□□ 1.14
CDH23-205ENST00000398809 TPRNQ4KMQ1 711 aa22.14■■□□□ 1.14
CDH23-205ENST00000398809 CARMIL2Q6F5E8 1435 aa22.12■■□□□ 1.13
CDH23-205ENST00000398809 DEKP35659 375 aaKnown RBP22.12■■□□□ 1.13
CDH23-205ENST00000398809 STK26Q9P289 416 aa22.12■■□□□ 1.13
CDH23-205ENST00000398809 MS4A1P11836 297 aa22.11■■□□□ 1.13
CDH23-205ENST00000398809 SOX12O15370 315 aa22.11■■□□□ 1.13
CDH23-205ENST00000398809 MLECQ14165 292 aa22.09■■□□□ 1.13
CDH23-205ENST00000398809 CASC1Q6TDU7 716 aa22.09■■□□□ 1.13
CDH23-205ENST00000398809 EFCAB2Q5VUJ9 269 aa22.08■■□□□ 1.13
CDH23-205ENST00000398809 LMOD2Q6P5Q4 547 aa22.08■■□□□ 1.12
CDH23-205ENST00000398809 SMARCA4P51532 1647 aa22.07■■□□□ 1.12
CDH23-205ENST00000398809 NLRP13Q86W25 1043 aa22.06■■□□□ 1.12
CDH23-205ENST00000398809 ST20-MTHFSA0A0A6YYL1 179 aa22.06■■□□□ 1.12
CDH23-205ENST00000398809 SPRYD3Q8NCJ5 442 aa22.06■■□□□ 1.12
CDH23-205ENST00000398809 U2AF1L5P0DN76 240 aaPredicted RBP22.05■■□□□ 1.12
CDH23-205ENST00000398809 U2AF1Q01081 240 aaKnown RBP eCLIP22.05■■□□□ 1.12
CDH23-205ENST00000398809 HSP90AB1P08238 724 aaKnown RBP22.05■■□□□ 1.12
CDH23-205ENST00000398809 PRKRIP1Q9H875 184 aaPredicted RBP22.04■■□□□ 1.12
CDH23-205ENST00000398809 CHMP4BQ9H444 224 aaKnown RBP22.03■■□□□ 1.12
CDH23-205ENST00000398809 TCERG1O14776 1098 aaKnown RBP22.02■■□□□ 1.12
CDH23-205ENST00000398809 PNNQ9H307 717 aaKnown RBP22.02■■□□□ 1.12
CDH23-205ENST00000398809 KIF3BO15066 747 aa22.01■■□□□ 1.11
CDH23-205ENST00000398809 PTMAP06454 111 aaKnown RBP22.01■■□□□ 1.11
CDH23-205ENST00000398809 JPH4Q96JJ6 628 aa22■■□□□ 1.11
CDH23-205ENST00000398809 CCDC146Q8IYE0 955 aa21.98■■□□□ 1.11
CDH23-205ENST00000398809 GOLGA2Q08379 1002 aa21.96■■□□□ 1.11
CDH23-205ENST00000398809 IGF1RP08069 1367 aa21.96■■□□□ 1.11
CDH23-205ENST00000398809 HSCBQ8IWL3 235 aa21.96■■□□□ 1.11
CDH23-205ENST00000398809 CCDC18Q5T9S5 1454 aa21.95■■□□□ 1.11
CDH23-205ENST00000398809 CLUAP1Q96AJ1 413 aa21.94■■□□□ 1.1
CDH23-205ENST00000398809 SLKQ9H2G2 1235 aaPredicted RBP21.94■■□□□ 1.1
CDH23-205ENST00000398809 APBB1O00213 710 aa21.94■■□□□ 1.1
CDH23-205ENST00000398809 HAP1P54257 671 aaPredicted RBP21.93■■□□□ 1.1
CDH23-205ENST00000398809 OS9Q13438 667 aaPredicted RBP21.92■■□□□ 1.1
CDH23-205ENST00000398809 PLCB2Q00722 1185 aa21.91■■□□□ 1.1
CDH23-205ENST00000398809 PDE3BQ13370 1112 aa21.91■■□□□ 1.1
CDH23-205ENST00000398809 NAP1L5Q96NT1 182 aaPredicted RBP21.91■■□□□ 1.1
CDH23-205ENST00000398809 IPO9Q96P70 1041 aaKnown RBP21.91■■□□□ 1.1
CDH23-205ENST00000398809 HDGFL2Q7Z4V5 671 aaPredicted RBP21.9■■□□□ 1.1
CDH23-205ENST00000398809 PANK3Q9H999 370 aa21.9■■□□□ 1.1
CDH23-205ENST00000398809 NUTM2DQ5VT03 806 aaPredicted RBP21.9■■□□□ 1.1
CDH23-205ENST00000398809 DNTTIP2Q5QJE6 756 aaKnown RBP21.89■■□□□ 1.1
CDH23-205ENST00000398809 ITPRIPQ8IWB1 547 aa21.89■■□□□ 1.1
CDH23-205ENST00000398809 IPO8O15397 1037 aaKnown RBP21.89■■□□□ 1.09
CDH23-205ENST00000398809 RSPH4AQ5TD94 716 aa21.89■■□□□ 1.09
CDH23-205ENST00000398809 SPAG9O60271 1321 aaKnown RBP21.88■■□□□ 1.09
CDH23-205ENST00000398809 RWDD1Q9H446 243 aaPredicted RBP21.88■■□□□ 1.09
CDH23-205ENST00000398809 PLIN1O60240 522 aa21.87■■□□□ 1.09
CDH23-205ENST00000398809 MYBBP1AQ9BQG0 1328 aaKnown RBP21.87■■□□□ 1.09
CDH23-205ENST00000398809 FANCD2Q9BXW9 1451 aa21.86■■□□□ 1.09
CDH23-205ENST00000398809 PHLDB1Q86UU1 1377 aa21.86■■□□□ 1.09
CDH23-205ENST00000398809 KCNJ4P48050 445 aa21.86■■□□□ 1.09
CDH23-205ENST00000398809 KIF15Q9NS87 1388 aa21.86■■□□□ 1.09
CDH23-205ENST00000398809 USP47Q96K76 1375 aa21.84■■□□□ 1.09
CDH23-205ENST00000398809 TAOK2Q9UL54 1235 aa21.84■■□□□ 1.09
CDH23-205ENST00000398809 ZBED9Q6R2W3 1325 aa21.84■■□□□ 1.09
CDH23-205ENST00000398809 TRAK1Q9UPV9 953 aa21.84■■□□□ 1.09
CDH23-205ENST00000398809 SMC4Q9NTJ3 1288 aa21.83■■□□□ 1.09
CDH23-205ENST00000398809 ZNF644Q9H582 1327 aaPredicted RBP21.83■■□□□ 1.09
CDH23-205ENST00000398809 ZRSR1Q15695 479 aaKnown RBP21.83■■□□□ 1.08
CDH23-205ENST00000398809 EXOC6Q8TAG9 804 aa21.83■■□□□ 1.08
CDH23-205ENST00000398809 RRP7AQ9Y3A4 280 aaKnown RBP21.82■■□□□ 1.08
CDH23-205ENST00000398809 HDGFP51858 240 aaKnown RBP21.82■■□□□ 1.08
CDH23-205ENST00000398809 GZF1Q9H116 711 aaPredicted RBP21.81■■□□□ 1.08
CDH23-205ENST00000398809 KIF21BO75037 1637 aa21.81■■□□□ 1.08
CDH23-205ENST00000398809 FGD1P98174 961 aa21.81■■□□□ 1.08
CDH23-205ENST00000398809 RTF1Q92541 710 aaKnown RBP21.81■■□□□ 1.08
CDH23-205ENST00000398809 CCDC144AA2RUR9 1427 aa21.8■■□□□ 1.08
CDH23-205ENST00000398809 CENPJQ9HC77 1338 aaPredicted RBP21.8■■□□□ 1.08
CDH23-205ENST00000398809 EIF3AQ14152 1382 aaKnown RBP21.79■■□□□ 1.08
CDH23-205ENST00000398809 FGD5Q6ZNL6 1462 aa21.78■■□□□ 1.08
CDH23-205ENST00000398809 MFAP1P55081 439 aaKnown RBP21.78■■□□□ 1.08
CDH23-205ENST00000398809 BCL2L13Q9BXK5 485 aa21.77■■□□□ 1.08
CDH23-205ENST00000398809 FGD6Q6ZV73 1430 aa21.76■■□□□ 1.07
CDH23-205ENST00000398809 PMFBP1Q8TBY8 1022 aa21.76■■□□□ 1.07
CDH23-205ENST00000398809 RAD54L2Q9Y4B4 1467 aa21.76■■□□□ 1.07
CDH23-205ENST00000398809 WASHC2CQ9Y4E1 1318 aa21.76■■□□□ 1.07
CDH23-205ENST00000398809 RRP1P56182 461 aaKnown RBP21.75■■□□□ 1.07
CDH23-205ENST00000398809 L1TD1Q5T7N2 865 aaKnown RBP21.75■■□□□ 1.07
CDH23-205ENST00000398809 PDE4AP27815 886 aa21.74■■□□□ 1.07
CDH23-205ENST00000398809 TERF2IPQ9NYB0 399 aa21.74■■□□□ 1.07
CDH23-205ENST00000398809 NAP1L2Q9ULW6 460 aaPredicted RBP21.74■■□□□ 1.07
CDH23-205ENST00000398809 KIF7Q2M1P5 1343 aa21.73■■□□□ 1.07
CDH23-205ENST00000398809 CALD1Q05682 793 aaKnown RBP21.72■■□□□ 1.07
CDH23-205ENST00000398809 SLC4A3P48751 1232 aa21.72■■□□□ 1.07
CDH23-205ENST00000398809 CRBNQ96SW2 442 aa21.71■■□□□ 1.07
CDH23-205ENST00000398809 APAF1O14727 1248 aa21.71■■□□□ 1.07
CDH23-205ENST00000398809 MCCP23508 829 aa21.7■■□□□ 1.06
CDH23-205ENST00000398809 CCDC7Q96M83 1385 aa21.7■■□□□ 1.06
CDH23-205ENST00000398809 ARAP1Q96P48 1450 aa21.69■■□□□ 1.06
CDH23-205ENST00000398809 PAK3O75914 559 aaPredicted RBP21.69■■□□□ 1.06
CDH23-205ENST00000398809 LRRC9Q6ZRR7 1453 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms