RNA–Protein interactions for RNA: ENST00000395310.6

SEC31A-205, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SEC31A, Length 4,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-205ENST00000395310 ST20-MTHFSA0A0A6YYL1 179 aa17.19■□□□□ 0.34
SEC31A-205ENST00000395310 PLEKHD1A6NEE1 506 aa17.19■□□□□ 0.34
SEC31A-205ENST00000395310 PDE4AP27815 886 aa17.19■□□□□ 0.34
SEC31A-205ENST00000395310 TCERG1O14776 1098 aaKnown RBP17.19■□□□□ 0.34
SEC31A-205ENST00000395310 KNSTRNQ9Y448 316 aa17.18■□□□□ 0.34
SEC31A-205ENST00000395310 NBPF8Q3BBV2 869 aa17.18■□□□□ 0.34
SEC31A-205ENST00000395310 ZNF644Q9H582 1327 aaPredicted RBP17.18■□□□□ 0.34
SEC31A-205ENST00000395310 TOP2BQ02880 1626 aa17.17■□□□□ 0.34
SEC31A-205ENST00000395310 FGD5Q6ZNL6 1462 aa17.17■□□□□ 0.34
SEC31A-205ENST00000395310 RAD54L2Q9Y4B4 1467 aa17.16■□□□□ 0.34
SEC31A-205ENST00000395310 CNTLNQ9NXG0 1405 aa17.16■□□□□ 0.34
SEC31A-205ENST00000395310 FRAT1Q92837 279 aaPredicted RBP17.16■□□□□ 0.34
SEC31A-205ENST00000395310 CUX1P39880 1505 aa17.15■□□□□ 0.34
SEC31A-205ENST00000395310 TNNT2P45379 298 aaPredicted RBP17.15■□□□□ 0.34
SEC31A-205ENST00000395310 GLIPR1L2Q4G1C9 344 aa17.14■□□□□ 0.33
SEC31A-205ENST00000395310 RRP1P56182 461 aaKnown RBP17.14■□□□□ 0.33
SEC31A-205ENST00000395310 MAPKBP1O60336 1514 aa17.14■□□□□ 0.33
SEC31A-205ENST00000395310 HSP90AA1P07900 732 aaKnown RBP17.13■□□□□ 0.33
SEC31A-205ENST00000395310 SPRYD3Q8NCJ5 442 aa17.13■□□□□ 0.33
SEC31A-205ENST00000395310 TIAM1Q13009 1591 aa17.13■□□□□ 0.33
SEC31A-205ENST00000395310 NUP155O75694 1391 aa17.12■□□□□ 0.33
SEC31A-205ENST00000395310 USP47Q96K76 1375 aa17.11■□□□□ 0.33
SEC31A-205ENST00000395310 KTN1Q86UP2 1357 aaKnown RBP17.1■□□□□ 0.33
SEC31A-205ENST00000395310 SLKQ9H2G2 1235 aaPredicted RBP17.09■□□□□ 0.33
SEC31A-205ENST00000395310 CRBNQ96SW2 442 aa17.09■□□□□ 0.33
SEC31A-205ENST00000395310 RALBP1Q15311 655 aa17.09■□□□□ 0.33
SEC31A-205ENST00000395310 ROCK2O75116 1388 aaKnown RBP17.08■□□□□ 0.33
SEC31A-205ENST00000395310 MYOM3Q5VTT5 1437 aa17.08■□□□□ 0.32
SEC31A-205ENST00000395310 BECN1Q14457 450 aa17.07■□□□□ 0.32
SEC31A-205ENST00000395310 CDCA7LQ96GN5 454 aa17.07■□□□□ 0.32
SEC31A-205ENST00000395310 NLRP13Q86W25 1043 aa17.07■□□□□ 0.32
SEC31A-205ENST00000395310 ARID4BQ4LE39 1312 aaPredicted RBP17.07■□□□□ 0.32
SEC31A-205ENST00000395310 SKAP1Q86WV1 359 aa17.07■□□□□ 0.32
SEC31A-205ENST00000395310 NCOA2Q15596 1464 aa17.06■□□□□ 0.32
SEC31A-205ENST00000395310 CFTRP13569 1480 aa17.06■□□□□ 0.32
SEC31A-205ENST00000395310 CCDC146Q8IYE0 955 aa17.05■□□□□ 0.32
SEC31A-205ENST00000395310 TMF1P82094 1093 aa17.04■□□□□ 0.32
SEC31A-205ENST00000395310 MYBBP1AQ9BQG0 1328 aaKnown RBP17.04■□□□□ 0.32
SEC31A-205ENST00000395310 CASKIN1Q8WXD9 1431 aa17.04■□□□□ 0.32
SEC31A-205ENST00000395310 HNRNPMP52272 730 aaKnown RBP eCLIP17.02■□□□□ 0.328e-7■■■■□ 21
SEC31A-205ENST00000395310 FANCD2Q9BXW9 1451 aa17.02■□□□□ 0.31
SEC31A-205ENST00000395310 HFM1A2PYH4 1435 aa17.01■□□□□ 0.31
SEC31A-205ENST00000395310 KIF15Q9NS87 1388 aa17.01■□□□□ 0.31
SEC31A-205ENST00000395310 NAIPQ13075 1403 aa17■□□□□ 0.31
SEC31A-205ENST00000395310 GZF1Q9H116 711 aaPredicted RBP17■□□□□ 0.31
SEC31A-205ENST00000395310 PANK3Q9H999 370 aa17■□□□□ 0.31
SEC31A-205ENST00000395310 PNISRQ8TF01 805 aaKnown RBP16.98■□□□□ 0.31
SEC31A-205ENST00000395310 NAP1L5Q96NT1 182 aaPredicted RBP16.97■□□□□ 0.31
SEC31A-205ENST00000395310 GSE1Q14687 1217 aa16.97■□□□□ 0.31
SEC31A-205ENST00000395310 BRPF3Q9ULD4 1205 aa16.96■□□□□ 0.31
SEC31A-205ENST00000395310 PDE3BQ13370 1112 aa16.95■□□□□ 0.3
SEC31A-205ENST00000395310 NCAPD3P42695 1498 aa16.95■□□□□ 0.3
SEC31A-205ENST00000395310 FYCO1Q9BQS8 1478 aa16.95■□□□□ 0.3
SEC31A-205ENST00000395310 ANKRD30AQ9BXX3 1397 aa16.95■□□□□ 0.3
SEC31A-205ENST00000395310 PCF11O94913 1555 aaKnown RBP16.94■□□□□ 0.3
SEC31A-205ENST00000395310 GOLGA2Q08379 1002 aa16.93■□□□□ 0.3
SEC31A-205ENST00000395310 CLUAP1Q96AJ1 413 aa16.93■□□□□ 0.3
SEC31A-205ENST00000395310 USP35Q9P2H5 1018 aa16.93■□□□□ 0.3
SEC31A-205ENST00000395310 FTSJ3Q8IY81 847 aaKnown RBP16.93■□□□□ 0.3
SEC31A-205ENST00000395310 BICRAQ9NZM4 1560 aa16.92■□□□□ 0.3
SEC31A-205ENST00000395310 PTPRKQ15262 1439 aa16.92■□□□□ 0.3
SEC31A-205ENST00000395310 SLC24A1O60721 1099 aa16.92■□□□□ 0.3
SEC31A-205ENST00000395310 NFKBIBQ15653 356 aa16.92■□□□□ 0.3
SEC31A-205ENST00000395310 VSIG10Q8N0Z9 540 aa16.92■□□□□ 0.3
SEC31A-205ENST00000395310 ANP32BQ92688 251 aaKnown RBP16.92■□□□□ 0.3
SEC31A-205ENST00000395310 CDCA8Q53HL2 280 aa16.9■□□□□ 0.3
SEC31A-205ENST00000395310 AQRO60306 1485 aaKnown RBP eCLIP16.89■□□□□ 0.297e-7■■■■□ 21.1
SEC31A-205ENST00000395310 FAM161AQ3B820 660 aa16.89■□□□□ 0.29
SEC31A-205ENST00000395310 BCL2L13Q9BXK5 485 aa16.89■□□□□ 0.29
SEC31A-205ENST00000395310 BACH2Q9BYV9 841 aa16.89■□□□□ 0.29
SEC31A-205ENST00000395310 SMG6Q86US8 1419 aaKnown RBP16.89■□□□□ 0.29
SEC31A-205ENST00000395310 MS4A1P11836 297 aa16.88■□□□□ 0.29
SEC31A-205ENST00000395310 TRIM44Q96DX7 344 aaPredicted RBP16.88■□□□□ 0.29
SEC31A-205ENST00000395310 RRP7AQ9Y3A4 280 aaKnown RBP16.88■□□□□ 0.29
SEC31A-205ENST00000395310 NCLP19338 710 aaKnown RBP16.86■□□□□ 0.29
SEC31A-205ENST00000395310 NBPF1Q3BBV0 1214 aa16.85■□□□□ 0.29
SEC31A-205ENST00000395310 CENPQQ7L2Z9 268 aaPredicted RBP16.85■□□□□ 0.29
SEC31A-205ENST00000395310 APAF1O14727 1248 aa16.85■□□□□ 0.29
SEC31A-205ENST00000395310 ADAMTS8Q9UP79 889 aa16.85■□□□□ 0.29
SEC31A-205ENST00000395310 COG6Q9Y2V7 657 aa16.84■□□□□ 0.29
SEC31A-205ENST00000395310 U2SURPO15042 1029 aaKnown RBP16.84■□□□□ 0.29
SEC31A-205ENST00000395310 GAPVD1Q14C86 1478 aa16.84■□□□□ 0.29
SEC31A-205ENST00000395310 FRAT2O75474 233 aaPredicted RBP16.84■□□□□ 0.29
SEC31A-205ENST00000395310 PDS5BQ9NTI5 1447 aa16.82■□□□□ 0.28
SEC31A-205ENST00000395310 SAFB2Q14151 953 aaKnown RBP eCLIP16.82■□□□□ 0.28
SEC31A-205ENST00000395310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.82■□□□□ 0.28
SEC31A-205ENST00000395310 PKNOX2Q96KN3 472 aa16.82■□□□□ 0.28
SEC31A-205ENST00000395310 MFAP1P55081 439 aaKnown RBP16.81■□□□□ 0.28
SEC31A-205ENST00000395310 TPRNQ4KMQ1 711 aa16.81■□□□□ 0.28
SEC31A-205ENST00000395310 MORC1Q86VD1 984 aa16.81■□□□□ 0.28
SEC31A-205ENST00000395310 NESP48681 1621 aa16.8■□□□□ 0.28
SEC31A-205ENST00000395310 C20orf194Q5TEA3 1177 aa16.8■□□□□ 0.28
SEC31A-205ENST00000395310 CFAP53Q96M91 514 aa16.8■□□□□ 0.28
SEC31A-205ENST00000395310 NCOA1Q15788 1441 aa16.8■□□□□ 0.28
SEC31A-205ENST00000395310 UNC13AQ9UPW8 1703 aa16.79■□□□□ 0.28
SEC31A-205ENST00000395310 BRD4O60885 1362 aaPredicted RBP16.79■□□□□ 0.28
SEC31A-205ENST00000395310 MAP3K1Q13233 1512 aa16.78■□□□□ 0.28
SEC31A-205ENST00000395310 ANKRD30BQ9BXX2 1392 aa16.77■□□□□ 0.28
SEC31A-205ENST00000395310 HSP90AB1P08238 724 aaKnown RBP16.77■□□□□ 0.27
SEC31A-205ENST00000395310 ARID3AQ99856 593 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms