RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 HECW1Q76N89 1606 aa13.14□□□□□ -0.31
HERC4-203ENST00000395185 MAP3K4Q9Y6R4 1608 aa13.14□□□□□ -0.31
HERC4-203ENST00000395185 CDK13Q14004 1512 aaKnown RBP13.13□□□□□ -0.31
HERC4-203ENST00000395185 NEO1Q92859 1461 aa13.13□□□□□ -0.31
HERC4-203ENST00000395185 COL17A1Q9UMD9 1497 aaPredicted RBP13.13□□□□□ -0.31
HERC4-203ENST00000395185 PLCH2O75038 1416 aa13.13□□□□□ -0.31
HERC4-203ENST00000395185 MTUS2Q5JR59 1369 aa13.11□□□□□ -0.31
HERC4-203ENST00000395185 AKNAQ7Z591 1439 aa13.11□□□□□ -0.31
HERC4-203ENST00000395185 CFAP43Q8NDM7 1665 aa13.11□□□□□ -0.31
HERC4-203ENST00000395185 TIAM1Q13009 1591 aa13.11□□□□□ -0.31
HERC4-203ENST00000395185 LRRC9Q6ZRR7 1453 aa13.1□□□□□ -0.31
HERC4-203ENST00000395185 ARAP3Q8WWN8 1544 aa13.1□□□□□ -0.31
HERC4-203ENST00000395185 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.1□□□□□ -0.31
HERC4-203ENST00000395185 SLC4A1APQ9BWU0 796 aaKnown RBP13.1□□□□□ -0.31
HERC4-203ENST00000395185 MYT1LQ9UL68 1186 aa13.1□□□□□ -0.31
HERC4-203ENST00000395185 ABCA9Q8IUA7 1624 aa13.09□□□□□ -0.31
HERC4-203ENST00000395185 FANCAO15360 1455 aa13.09□□□□□ -0.31
HERC4-203ENST00000395185 PPARGC1BQ86YN6 1023 aaKnown RBP13.08□□□□□ -0.32
HERC4-203ENST00000395185 CFDP1Q9UEE9 299 aaPredicted RBP13.08□□□□□ -0.32
HERC4-203ENST00000395185 ZNF777Q9ULD5 760 aaPredicted RBP13.08□□□□□ -0.32
HERC4-203ENST00000395185 DENND4BO75064 1496 aaPredicted RBP13.07□□□□□ -0.32
HERC4-203ENST00000395185 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.07□□□□□ -0.325e-7■□□□□ 10.2
HERC4-203ENST00000395185 ARID4BQ4LE39 1312 aaPredicted RBP13.07□□□□□ -0.32
HERC4-203ENST00000395185 SCAPERQ9BY12 1400 aa13.05□□□□□ -0.32
HERC4-203ENST00000395185 KDM4FA0A1W2PPD8 638 aa13.05□□□□□ -0.32
HERC4-203ENST00000395185 PPRC1Q5VV67 1664 aaKnown RBP13.05□□□□□ -0.32
HERC4-203ENST00000395185 CCNB3Q8WWL7 1395 aa13.05□□□□□ -0.32
HERC4-203ENST00000395185 LRRIQ1Q96JM4 1722 aa13.04□□□□□ -0.32
HERC4-203ENST00000395185 AFAP1Q8N556 730 aa13.03□□□□□ -0.32
HERC4-203ENST00000395185 TRIM26Q12899 539 aaPredicted RBP13.01□□□□□ -0.33
HERC4-203ENST00000395185 ADGRL1O94910 1474 aa13.01□□□□□ -0.33
HERC4-203ENST00000395185 KIF14Q15058 1648 aa13.01□□□□□ -0.33
HERC4-203ENST00000395185 ARHGAP5Q13017 1502 aa13□□□□□ -0.33
HERC4-203ENST00000395185 RNF39Q9H2S5 420 aa13□□□□□ -0.33
HERC4-203ENST00000395185 HNRNPMP52272 730 aaKnown RBP eCLIP12.99□□□□□ -0.331e-6■■■■□ 20.7
HERC4-203ENST00000395185 EHBP1L1Q8N3D4 1523 aa12.98□□□□□ -0.33
HERC4-203ENST00000395185 RSPH4AQ5TD94 716 aa12.98□□□□□ -0.33
HERC4-203ENST00000395185 TTC37Q6PGP7 1564 aa12.97□□□□□ -0.33
HERC4-203ENST00000395185 CFAP74Q9C0B2 1584 aa12.97□□□□□ -0.33
HERC4-203ENST00000395185 NCOA2Q15596 1464 aa12.97□□□□□ -0.33
HERC4-203ENST00000395185 MAGI2Q86UL8 1455 aa12.97□□□□□ -0.33
HERC4-203ENST00000395185 RRBP1Q9P2E9 1410 aaKnown RBP12.96□□□□□ -0.33
HERC4-203ENST00000395185 GPATCH8Q9UKJ3 1502 aaKnown RBP12.96□□□□□ -0.33
HERC4-203ENST00000395185 SPAG9O60271 1321 aaKnown RBP12.95□□□□□ -0.34
HERC4-203ENST00000395185 POGZQ7Z3K3 1410 aa12.95□□□□□ -0.34
HERC4-203ENST00000395185 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.94□□□□□ -0.343e-7■■■□□ 17.8
HERC4-203ENST00000395185 ZNF518AQ6AHZ1 1483 aa12.93□□□□□ -0.34
HERC4-203ENST00000395185 PLEKHH2Q8IVE3 1493 aa12.93□□□□□ -0.34
HERC4-203ENST00000395185 SLC4A2P04920 1241 aa12.93□□□□□ -0.34
HERC4-203ENST00000395185 TSPY4P0CV99 314 aa12.93□□□□□ -0.34
HERC4-203ENST00000395185 TSPY10P0CW01 314 aa12.93□□□□□ -0.34
HERC4-203ENST00000395185 MLECQ14165 292 aa12.93□□□□□ -0.34
HERC4-203ENST00000395185 ESF1Q9H501 851 aaKnown RBP12.93□□□□□ -0.34
HERC4-203ENST00000395185 KIAA1107Q9UPP5 1409 aa12.93□□□□□ -0.34
HERC4-203ENST00000395185 MYOM3Q5VTT5 1437 aa12.92□□□□□ -0.34
HERC4-203ENST00000395185 ZNF644Q9H582 1327 aaPredicted RBP12.91□□□□□ -0.34
HERC4-203ENST00000395185 MIA2Q96PC5 1412 aa12.91□□□□□ -0.34
HERC4-203ENST00000395185 ATP10AO60312 1499 aa12.91□□□□□ -0.34
HERC4-203ENST00000395185 TRAPPC8Q9Y2L5 1435 aa12.89□□□□□ -0.35
HERC4-203ENST00000395185 C1QBPQ07021 282 aaKnown RBP12.89□□□□□ -0.35
HERC4-203ENST00000395185 FGD6Q6ZV73 1430 aa12.88□□□□□ -0.35
HERC4-203ENST00000395185 YEATS2Q9ULM3 1422 aa12.88□□□□□ -0.35
HERC4-203ENST00000395185 SUPT6HQ7KZ85 1726 aaKnown RBP12.88□□□□□ -0.35
HERC4-203ENST00000395185 MYO5CQ9NQX4 1742 aa12.88□□□□□ -0.35
HERC4-203ENST00000395185 ZFYVE16Q7Z3T8 1539 aa12.88□□□□□ -0.35
HERC4-203ENST00000395185 MLH3Q9UHC1 1453 aa12.87□□□□□ -0.35
HERC4-203ENST00000395185 PCGF6Q9BYE7 350 aa12.87□□□□□ -0.35
HERC4-203ENST00000395185 C9orf84Q5VXU9 1444 aa12.87□□□□□ -0.35
HERC4-203ENST00000395185 TCOF1Q13428 1488 aaKnown RBP12.86□□□□□ -0.35
HERC4-203ENST00000395185 ZMYM4Q5VZL5 1548 aa12.85□□□□□ -0.35
HERC4-203ENST00000395185 ARHGEF12Q9NZN5 1544 aa12.84□□□□□ -0.35
HERC4-203ENST00000395185 FRMPD1Q5SYB0 1578 aa12.83□□□□□ -0.36
HERC4-203ENST00000395185 PREX2Q70Z35 1606 aa12.82□□□□□ -0.36
HERC4-203ENST00000395185 CACNB1Q02641 598 aaPredicted RBP12.82□□□□□ -0.36
HERC4-203ENST00000395185 ABCC1P33527 1531 aa12.82□□□□□ -0.36
HERC4-203ENST00000395185 GGT6Q6P531 493 aa12.81□□□□□ -0.36
HERC4-203ENST00000395185 U3KPZ7 1027 aaPredicted RBP12.81□□□□□ -0.36
HERC4-203ENST00000395185 RTEL1-TNFRSF6BF6WH68 1400 aa12.8□□□□□ -0.36
HERC4-203ENST00000395185 RICTORQ6R327 1708 aa12.8□□□□□ -0.36
HERC4-203ENST00000395185 ARHGEF40Q8TER5 1519 aa12.8□□□□□ -0.36
HERC4-203ENST00000395185 CDC42BPBQ9Y5S2 1711 aa12.79□□□□□ -0.36
HERC4-203ENST00000395185 MBD5Q9P267 1494 aa12.79□□□□□ -0.36
HERC4-203ENST00000395185 FAM50AQ14320 339 aaKnown RBP12.79□□□□□ -0.36
HERC4-203ENST00000395185 SYCP2Q9BX26 1530 aa12.78□□□□□ -0.36
HERC4-203ENST00000395185 KDM5CP41229 1560 aa12.78□□□□□ -0.36
HERC4-203ENST00000395185 PTPRKQ15262 1439 aa12.78□□□□□ -0.36
HERC4-203ENST00000395185 PTPRMP28827 1452 aa12.78□□□□□ -0.36
HERC4-203ENST00000395185 SAMD9LQ8IVG5 1584 aa12.77□□□□□ -0.36
HERC4-203ENST00000395185 KIF3BO15066 747 aa12.77□□□□□ -0.37
HERC4-203ENST00000395185 DHX29Q7Z478 1369 aaKnown RBP12.77□□□□□ -0.37
HERC4-203ENST00000395185 PTPN23Q9H3S7 1636 aa12.77□□□□□ -0.37
HERC4-203ENST00000395185 CDC42BPAQ5VT25 1732 aa12.76□□□□□ -0.37
HERC4-203ENST00000395185 ABCC5O15440 1437 aa12.76□□□□□ -0.37
HERC4-203ENST00000395185 CCDC141Q6ZP82 1450 aa12.76□□□□□ -0.37
HERC4-203ENST00000395185 A2MP01023 1474 aa12.75□□□□□ -0.37
HERC4-203ENST00000395185 CEBPAP49715 358 aaPredicted RBP12.75□□□□□ -0.37
HERC4-203ENST00000395185 CAMSAP2Q08AD1 1489 aa12.75□□□□□ -0.37
HERC4-203ENST00000395185 HECW2Q9P2P5 1572 aa12.75□□□□□ -0.37
HERC4-203ENST00000395185 HRCP23327 699 aa12.74□□□□□ -0.37
HERC4-203ENST00000395185 FOXD4L1Q9NU39 408 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms