RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 CC2D2AQ9P2K1 1620 aa14.79□□□□□ -0.04
NPC1L1-202ENST00000381160 PLIN1O60240 522 aa14.78□□□□□ -0.04
NPC1L1-202ENST00000381160 DDRGK1Q96HY6 314 aa14.78□□□□□ -0.04
NPC1L1-202ENST00000381160 KDM2AQ9Y2K7 1162 aa14.78□□□□□ -0.04
NPC1L1-202ENST00000381160 GSE1Q14687 1217 aa14.77□□□□□ -0.04
NPC1L1-202ENST00000381160 ARXQ96QS3 562 aa14.77□□□□□ -0.04
NPC1L1-202ENST00000381160 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.76□□□□□ -0.05
NPC1L1-202ENST00000381160 CASKIN1Q8WXD9 1431 aa14.76□□□□□ -0.05
NPC1L1-202ENST00000381160 NCOA1Q15788 1441 aa14.76□□□□□ -0.05
NPC1L1-202ENST00000381160 PTPN23Q9H3S7 1636 aa14.74□□□□□ -0.05
NPC1L1-202ENST00000381160 BACH2Q9BYV9 841 aa14.74□□□□□ -0.05
NPC1L1-202ENST00000381160 MYOM3Q5VTT5 1437 aa14.74□□□□□ -0.05
NPC1L1-202ENST00000381160 FYCO1Q9BQS8 1478 aa14.74□□□□□ -0.05
NPC1L1-202ENST00000381160 PKNOX2Q96KN3 472 aa14.73□□□□□ -0.05
NPC1L1-202ENST00000381160 HMGXB3Q12766 1538 aa14.73□□□□□ -0.05
NPC1L1-202ENST00000381160 NCOA2Q15596 1464 aa14.73□□□□□ -0.05
NPC1L1-202ENST00000381160 FGD5Q6ZNL6 1462 aa14.73□□□□□ -0.05
NPC1L1-202ENST00000381160 NFKBIBQ15653 356 aa14.73□□□□□ -0.05
NPC1L1-202ENST00000381160 PNISRQ8TF01 805 aaKnown RBP14.72□□□□□ -0.05
NPC1L1-202ENST00000381160 ZNF777Q9ULD5 760 aaPredicted RBP14.72□□□□□ -0.05
NPC1L1-202ENST00000381160 FRAT1Q92837 279 aaPredicted RBP14.72□□□□□ -0.05
NPC1L1-202ENST00000381160 CARD11Q9BXL7 1154 aa14.72□□□□□ -0.05
NPC1L1-202ENST00000381160 CFTRP13569 1480 aa14.71□□□□□ -0.06
NPC1L1-202ENST00000381160 RGS3P49796 1198 aa14.7□□□□□ -0.06
NPC1L1-202ENST00000381160 CADPSQ9ULU8 1353 aa14.69□□□□□ -0.06
NPC1L1-202ENST00000381160 CDCA7LQ96GN5 454 aa14.68□□□□□ -0.06
NPC1L1-202ENST00000381160 USP47Q96K76 1375 aa14.68□□□□□ -0.06
NPC1L1-202ENST00000381160 CRBNQ96SW2 442 aa14.67□□□□□ -0.06
NPC1L1-202ENST00000381160 MS4A1P11836 297 aa14.67□□□□□ -0.06
NPC1L1-202ENST00000381160 CFAP43Q8NDM7 1665 aa14.66□□□□□ -0.06
NPC1L1-202ENST00000381160 RNF123Q5XPI4 1314 aa14.65□□□□□ -0.06
NPC1L1-202ENST00000381160 RAD54L2Q9Y4B4 1467 aa14.65□□□□□ -0.06
NPC1L1-202ENST00000381160 CC2D1BQ5T0F9 858 aaKnown RBP14.65□□□□□ -0.06
NPC1L1-202ENST00000381160 FRAT2O75474 233 aaPredicted RBP14.62□□□□□ -0.07
NPC1L1-202ENST00000381160 KDM5BQ9UGL1 1544 aa14.62□□□□□ -0.07
NPC1L1-202ENST00000381160 ST20-MTHFSA0A0A6YYL1 179 aa14.62□□□□□ -0.07
NPC1L1-202ENST00000381160 PKD2Q13563 968 aa14.61□□□□□ -0.07
NPC1L1-202ENST00000381160 GLIPR1L2Q4G1C9 344 aa14.61□□□□□ -0.07
NPC1L1-202ENST00000381160 MYBBP1AQ9BQG0 1328 aaKnown RBP14.61□□□□□ -0.07
NPC1L1-202ENST00000381160 WASHC2CQ9Y4E1 1318 aa14.61□□□□□ -0.07
NPC1L1-202ENST00000381160 ZNF644Q9H582 1327 aaPredicted RBP14.61□□□□□ -0.07
NPC1L1-202ENST00000381160 KIF15Q9NS87 1388 aa14.59□□□□□ -0.07
NPC1L1-202ENST00000381160 TDRD9Q8NDG6 1382 aaKnown RBP14.59□□□□□ -0.07
NPC1L1-202ENST00000381160 DHX29Q7Z478 1369 aaKnown RBP14.59□□□□□ -0.07
NPC1L1-202ENST00000381160 RALBP1Q15311 655 aa14.58□□□□□ -0.07
NPC1L1-202ENST00000381160 ANKRD30BQ9BXX2 1392 aa14.58□□□□□ -0.08
NPC1L1-202ENST00000381160 DCAF11Q8TEB1 546 aa14.58□□□□□ -0.08
NPC1L1-202ENST00000381160 NLRP13Q86W25 1043 aa14.57□□□□□ -0.08
NPC1L1-202ENST00000381160 SLKQ9H2G2 1235 aaPredicted RBP14.57□□□□□ -0.08
NPC1L1-202ENST00000381160 EFCAB5A4FU69 1503 aa14.56□□□□□ -0.08
NPC1L1-202ENST00000381160 RGL3Q3MIN7 710 aa14.55□□□□□ -0.08
NPC1L1-202ENST00000381160 C20orf194Q5TEA3 1177 aa14.55□□□□□ -0.08
NPC1L1-202ENST00000381160 PDE3BQ13370 1112 aa14.55□□□□□ -0.08
NPC1L1-202ENST00000381160 PDS5BQ9NTI5 1447 aa14.55□□□□□ -0.08
NPC1L1-202ENST00000381160 KTN1Q86UP2 1357 aaKnown RBP14.54□□□□□ -0.08
NPC1L1-202ENST00000381160 FAM161AQ3B820 660 aa14.54□□□□□ -0.08
NPC1L1-202ENST00000381160 RPRD2Q5VT52 1461 aaKnown RBP14.53□□□□□ -0.08
NPC1L1-202ENST00000381160 RSPH6AQ9H0K4 717 aa14.53□□□□□ -0.08
NPC1L1-202ENST00000381160 NESP48681 1621 aa14.52□□□□□ -0.08
NPC1L1-202ENST00000381160 NAP1L5Q96NT1 182 aaPredicted RBP14.52□□□□□ -0.08
NPC1L1-202ENST00000381160 BRD4O60885 1362 aaPredicted RBP14.52□□□□□ -0.08
NPC1L1-202ENST00000381160 ROCK2O75116 1388 aaKnown RBP14.52□□□□□ -0.08
NPC1L1-202ENST00000381160 CANXP27824 592 aaKnown RBP14.52□□□□□ -0.08
NPC1L1-202ENST00000381160 CFDP1Q9UEE9 299 aaPredicted RBP14.52□□□□□ -0.09
NPC1L1-202ENST00000381160 WDR43Q15061 677 aaKnown RBP eCLIP14.51□□□□□ -0.09
NPC1L1-202ENST00000381160 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.51□□□□□ -0.09
NPC1L1-202ENST00000381160 DENND4BO75064 1496 aaPredicted RBP14.51□□□□□ -0.09
NPC1L1-202ENST00000381160 FANCD2Q9BXW9 1451 aa14.51□□□□□ -0.09
NPC1L1-202ENST00000381160 SUPT6HQ7KZ85 1726 aaKnown RBP14.5□□□□□ -0.09
NPC1L1-202ENST00000381160 SPATA31E1Q6ZUB1 1445 aa14.5□□□□□ -0.09
NPC1L1-202ENST00000381160 SNAPC4Q5SXM2 1469 aa14.5□□□□□ -0.09
NPC1L1-202ENST00000381160 VSIG10Q8N0Z9 540 aa14.5□□□□□ -0.09
NPC1L1-202ENST00000381160 SPRYD3Q8NCJ5 442 aa14.5□□□□□ -0.09
NPC1L1-202ENST00000381160 KDM6BO15054 1643 aa14.5□□□□□ -0.09
NPC1L1-202ENST00000381160 EHBP1L1Q8N3D4 1523 aa14.49□□□□□ -0.09
NPC1L1-202ENST00000381160 MIA2Q96PC5 1412 aa14.49□□□□□ -0.09
NPC1L1-202ENST00000381160 CENPQQ7L2Z9 268 aaPredicted RBP14.49□□□□□ -0.09
NPC1L1-202ENST00000381160 GZF1Q9H116 711 aaPredicted RBP14.48□□□□□ -0.09
NPC1L1-202ENST00000381160 ERCC6Q03468 1493 aa14.48□□□□□ -0.09
NPC1L1-202ENST00000381160 PODXL2Q9NZ53 605 aa14.48□□□□□ -0.09
NPC1L1-202ENST00000381160 POGKQ9P215 609 aa14.47□□□□□ -0.09
NPC1L1-202ENST00000381160 BECN1Q14457 450 aa14.46□□□□□ -0.09
NPC1L1-202ENST00000381160 FAM43AQ8N2R8 423 aa14.46□□□□□ -0.09
NPC1L1-202ENST00000381160 TEX14Q8IWB6 1497 aa14.46□□□□□ -0.1
NPC1L1-202ENST00000381160 ARID4BQ4LE39 1312 aaPredicted RBP14.46□□□□□ -0.1
NPC1L1-202ENST00000381160 PLEKHG5O94827 1062 aa14.45□□□□□ -0.1
NPC1L1-202ENST00000381160 NUP155O75694 1391 aa14.44□□□□□ -0.1
NPC1L1-202ENST00000381160 HECW1Q76N89 1606 aa14.43□□□□□ -0.1
NPC1L1-202ENST00000381160 UPF2Q9HAU5 1272 aaKnown RBP14.43□□□□□ -0.1
NPC1L1-202ENST00000381160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.43□□□□□ -0.13e-6■■□□□ 11.4
NPC1L1-202ENST00000381160 PANK3Q9H999 370 aa14.43□□□□□ -0.1
NPC1L1-202ENST00000381160 UGGT2Q9NYU1 1516 aa14.43□□□□□ -0.1
NPC1L1-202ENST00000381160 POLA1P09884 1462 aaPredicted RBP14.42□□□□□ -0.1
NPC1L1-202ENST00000381160 LRPPRCP42704 1394 aaKnown RBP14.42□□□□□ -0.1
NPC1L1-202ENST00000381160 CDK13Q14004 1512 aaKnown RBP14.42□□□□□ -0.1
NPC1L1-202ENST00000381160 GRIN2BQ13224 1484 aa14.42□□□□□ -0.1
NPC1L1-202ENST00000381160 DAPK1P53355 1430 aa14.41□□□□□ -0.1
NPC1L1-202ENST00000381160 ADAMTS8Q9UP79 889 aa14.41□□□□□ -0.1
NPC1L1-202ENST00000381160 C8orf34Q49A92 452 aa14.41□□□□□ -0.1
NPC1L1-202ENST00000381160 CCDC146Q8IYE0 955 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms