RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 PTPN23Q9H3S7 1636 aa21.13■□□□□ 0.97
CSNK1A1-202ENST00000377843 USP35Q9P2H5 1018 aa21.13■□□□□ 0.97
CSNK1A1-202ENST00000377843 FGD6Q6ZV73 1430 aa21.12■□□□□ 0.97
CSNK1A1-202ENST00000377843 TARBP1Q13395 1621 aaKnown RBP21.11■□□□□ 0.97
CSNK1A1-202ENST00000377843 NAIPQ13075 1403 aa21.11■□□□□ 0.97
CSNK1A1-202ENST00000377843 ABCA5Q8WWZ7 1642 aa21.07■□□□□ 0.96
CSNK1A1-202ENST00000377843 DENND4BO75064 1496 aaPredicted RBP21.06■□□□□ 0.96
CSNK1A1-202ENST00000377843 PDE4AP27815 886 aa21.05■□□□□ 0.96
CSNK1A1-202ENST00000377843 FHOD3Q2V2M9 1422 aa21.04■□□□□ 0.96
CSNK1A1-202ENST00000377843 WDR62O43379 1518 aa21.03■□□□□ 0.96
CSNK1A1-202ENST00000377843 EIF5BO60841 1220 aaKnown RBP21.03■□□□□ 0.96
CSNK1A1-202ENST00000377843 KIF7Q2M1P5 1343 aa21.03■□□□□ 0.96
CSNK1A1-202ENST00000377843 CNGB1Q14028 1251 aaPredicted RBP21.02■□□□□ 0.96
CSNK1A1-202ENST00000377843 L3MBTL2Q969R5 705 aa21.01■□□□□ 0.95
CSNK1A1-202ENST00000377843 PPM1GO15355 546 aaPredicted RBP21■□□□□ 0.95
CSNK1A1-202ENST00000377843 BACH2Q9BYV9 841 aa21■□□□□ 0.95
CSNK1A1-202ENST00000377843 FBLN2P98095 1184 aa21■□□□□ 0.95
CSNK1A1-202ENST00000377843 FMN1Q68DA7 1419 aa20.99■□□□□ 0.95
CSNK1A1-202ENST00000377843 GSE1Q14687 1217 aa20.99■□□□□ 0.95
CSNK1A1-202ENST00000377843 TCERG1O14776 1098 aaKnown RBP20.98■□□□□ 0.95
CSNK1A1-202ENST00000377843 FYCO1Q9BQS8 1478 aa20.98■□□□□ 0.95
CSNK1A1-202ENST00000377843 EXOC6Q8TAG9 804 aa20.98■□□□□ 0.95
CSNK1A1-202ENST00000377843 NBPF8Q3BBV2 869 aa20.97■□□□□ 0.95
CSNK1A1-202ENST00000377843 THOC2Q8NI27 1593 aaKnown RBP20.97■□□□□ 0.95
CSNK1A1-202ENST00000377843 CASKIN1Q8WXD9 1431 aa20.96■□□□□ 0.95
CSNK1A1-202ENST00000377843 IFT140Q96RY7 1462 aa20.96■□□□□ 0.95
CSNK1A1-202ENST00000377843 CUL7Q14999 1698 aa20.95■□□□□ 0.94
CSNK1A1-202ENST00000377843 DHX29Q7Z478 1369 aaKnown RBP20.94■□□□□ 0.94
CSNK1A1-202ENST00000377843 FRAT1Q92837 279 aaPredicted RBP20.94■□□□□ 0.94
CSNK1A1-202ENST00000377843 RRP7BPQ9NSQ0 103 aa20.93■□□□□ 0.94
CSNK1A1-202ENST00000377843 FOXD1Q16676 465 aa20.92■□□□□ 0.94
CSNK1A1-202ENST00000377843 SPATA31E1Q6ZUB1 1445 aa20.92■□□□□ 0.94
CSNK1A1-202ENST00000377843 NFKBIBQ15653 356 aa20.92■□□□□ 0.94
CSNK1A1-202ENST00000377843 SKAP1Q86WV1 359 aa20.91■□□□□ 0.94
CSNK1A1-202ENST00000377843 GRIN2BQ13224 1484 aa20.9■□□□□ 0.94
CSNK1A1-202ENST00000377843 RRP1P56182 461 aaKnown RBP20.9■□□□□ 0.94
CSNK1A1-202ENST00000377843 PBRM1Q86U86 1689 aa20.89■□□□□ 0.93
CSNK1A1-202ENST00000377843 SNAPC4Q5SXM2 1469 aa20.88■□□□□ 0.93
CSNK1A1-202ENST00000377843 PNISRQ8TF01 805 aaKnown RBP20.88■□□□□ 0.93
CSNK1A1-202ENST00000377843 CHIC2Q9UKJ5 165 aa20.88■□□□□ 0.93
CSNK1A1-202ENST00000377843 MS4A1P11836 297 aa20.87■□□□□ 0.93
CSNK1A1-202ENST00000377843 SLC4A3P48751 1232 aa20.87■□□□□ 0.93
CSNK1A1-202ENST00000377843 MTUS2Q5JR59 1369 aa20.87■□□□□ 0.93
CSNK1A1-202ENST00000377843 ARID3CA6NKF2 412 aa20.87■□□□□ 0.93
CSNK1A1-202ENST00000377843 KDM6BO15054 1643 aa20.86■□□□□ 0.93
CSNK1A1-202ENST00000377843 EIF4G3O43432 1585 aaKnown RBP20.86■□□□□ 0.93
CSNK1A1-202ENST00000377843 MYOM3Q5VTT5 1437 aa20.84■□□□□ 0.93
CSNK1A1-202ENST00000377843 CHMP7Q8WUX9 453 aaPredicted RBP20.84■□□□□ 0.93
CSNK1A1-202ENST00000377843 MPHOSPH9Q99550 1183 aa20.84■□□□□ 0.93
CSNK1A1-202ENST00000377843 HECW1Q76N89 1606 aa20.84■□□□□ 0.93
CSNK1A1-202ENST00000377843 ADAMTS12P58397 1594 aa20.81■□□□□ 0.92
CSNK1A1-202ENST00000377843 DCAF11Q8TEB1 546 aa20.8■□□□□ 0.92
CSNK1A1-202ENST00000377843 CTTNBP2Q8WZ74 1663 aa20.8■□□□□ 0.92
CSNK1A1-202ENST00000377843 TEX14Q8IWB6 1497 aa20.79■□□□□ 0.92
CSNK1A1-202ENST00000377843 POLR3GLQ9BT43 218 aa20.79■□□□□ 0.92
CSNK1A1-202ENST00000377843 DDRGK1Q96HY6 314 aa20.78■□□□□ 0.92
CSNK1A1-202ENST00000377843 POLR1AO95602 1720 aaPredicted RBP20.78■□□□□ 0.92
CSNK1A1-202ENST00000377843 RCAN3Q9UKA8 241 aa20.78■□□□□ 0.92
CSNK1A1-202ENST00000377843 RSPH6AQ9H0K4 717 aa20.77■□□□□ 0.92
CSNK1A1-202ENST00000377843 EFCAB5A4FU69 1503 aa20.76■□□□□ 0.91
CSNK1A1-202ENST00000377843 FAM43AQ8N2R8 423 aa20.75■□□□□ 0.91
CSNK1A1-202ENST00000377843 TMC1Q8TDI8 760 aa20.75■□□□□ 0.91
CSNK1A1-202ENST00000377843 RPRD2Q5VT52 1461 aaKnown RBP20.74■□□□□ 0.91
CSNK1A1-202ENST00000377843 LRPPRCP42704 1394 aaKnown RBP20.73■□□□□ 0.91
CSNK1A1-202ENST00000377843 ANKRD30BQ9BXX2 1392 aa20.73■□□□□ 0.91
CSNK1A1-202ENST00000377843 GCC2Q8IWJ2 1684 aa20.73■□□□□ 0.91
CSNK1A1-202ENST00000377843 FRAT2O75474 233 aaPredicted RBP20.72■□□□□ 0.91
CSNK1A1-202ENST00000377843 LRRIQ1Q96JM4 1722 aa20.72■□□□□ 0.91
CSNK1A1-202ENST00000377843 PKNOX2Q96KN3 472 aa20.72■□□□□ 0.91
CSNK1A1-202ENST00000377843 BCORL1Q5H9F3 1711 aa20.71■□□□□ 0.91
CSNK1A1-202ENST00000377843 PLIN1O60240 522 aa20.7■□□□□ 0.9
CSNK1A1-202ENST00000377843 GRIN2AQ12879 1464 aa20.69■□□□□ 0.9
CSNK1A1-202ENST00000377843 MIA2Q96PC5 1412 aa20.68■□□□□ 0.9
CSNK1A1-202ENST00000377843 IQGAP2Q13576 1575 aa20.66■□□□□ 0.9
CSNK1A1-202ENST00000377843 UGGT2Q9NYU1 1516 aa20.66■□□□□ 0.9
CSNK1A1-202ENST00000377843 CDCA7LQ96GN5 454 aa20.65■□□□□ 0.9
CSNK1A1-202ENST00000377843 CRBNQ96SW2 442 aa20.65■□□□□ 0.9
CSNK1A1-202ENST00000377843 SUPT6HQ7KZ85 1726 aaKnown RBP20.64■□□□□ 0.89
CSNK1A1-202ENST00000377843 USP47Q96K76 1375 aa20.64■□□□□ 0.89
CSNK1A1-202ENST00000377843 MAGI3Q5TCQ9 1506 aa20.64■□□□□ 0.89
CSNK1A1-202ENST00000377843 TCOF1Q13428 1488 aaKnown RBP20.63■□□□□ 0.89
CSNK1A1-202ENST00000377843 ARHGEF11O15085 1522 aa20.63■□□□□ 0.89
CSNK1A1-202ENST00000377843 SAMD9Q5K651 1589 aa20.63■□□□□ 0.89
CSNK1A1-202ENST00000377843 RRAGDQ9NQL2 400 aaPredicted RBP20.62■□□□□ 0.89
CSNK1A1-202ENST00000377843 SYNJ2O15056 1496 aa20.62■□□□□ 0.89
CSNK1A1-202ENST00000377843 MAGI1Q96QZ7 1491 aaPredicted RBP20.61■□□□□ 0.89
CSNK1A1-202ENST00000377843 EHBP1L1Q8N3D4 1523 aa20.6■□□□□ 0.89
CSNK1A1-202ENST00000377843 DAXXQ9UER7 740 aaPredicted RBP20.6■□□□□ 0.89
CSNK1A1-202ENST00000377843 CEP170Q5SW79 1584 aa20.59■□□□□ 0.89
CSNK1A1-202ENST00000377843 C8orf34Q49A92 452 aa20.58■□□□□ 0.89
CSNK1A1-202ENST00000377843 BRD4O60885 1362 aaPredicted RBP20.58■□□□□ 0.89
CSNK1A1-202ENST00000377843 KIAA0586Q9BVV6 1533 aa20.58■□□□□ 0.89
CSNK1A1-202ENST00000377843 JPH4Q96JJ6 628 aa20.58■□□□□ 0.88
CSNK1A1-202ENST00000377843 ZNF326Q5BKZ1 582 aaKnown RBP20.57■□□□□ 0.88
CSNK1A1-202ENST00000377843 C20orf194Q5TEA3 1177 aa20.57■□□□□ 0.88
CSNK1A1-202ENST00000377843 KDM2BQ8NHM5 1336 aa20.56■□□□□ 0.88
CSNK1A1-202ENST00000377843 MYBBP1AQ9BQG0 1328 aaKnown RBP20.56■□□□□ 0.88
CSNK1A1-202ENST00000377843 KIF15Q9NS87 1388 aa20.56■□□□□ 0.88
CSNK1A1-202ENST00000377843 MBD5Q9P267 1494 aa20.54■□□□□ 0.88
CSNK1A1-202ENST00000377843 POGKQ9P215 609 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms