RNA–Protein interactions for RNA: ENST00000377038.7

DFFA-202, Transcript of DNA fragmentation factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DFFA, Length 6,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-202ENST00000377038 WASHC2CQ9Y4E1 1318 aa17.59■□□□□ 0.41
DFFA-202ENST00000377038 NUDCQ9Y266 331 aa17.58■□□□□ 0.41
DFFA-202ENST00000377038 GRIN2BQ13224 1484 aa17.58■□□□□ 0.4
DFFA-202ENST00000377038 MAPK8IP3Q9UPT6 1336 aa17.58■□□□□ 0.4
DFFA-202ENST00000377038 UPF2Q9HAU5 1272 aaKnown RBP17.57■□□□□ 0.4
DFFA-202ENST00000377038 SYNJ1O43426 1573 aa17.56■□□□□ 0.4
DFFA-202ENST00000377038 ROCK2O75116 1388 aaKnown RBP17.56■□□□□ 0.4
DFFA-202ENST00000377038 MYH16Q9H6N6 1097 aa17.55■□□□□ 0.4
DFFA-202ENST00000377038 BICRAQ9NZM4 1560 aa17.55■□□□□ 0.4
DFFA-202ENST00000377038 U2SURPO15042 1029 aaKnown RBP17.53■□□□□ 0.4
DFFA-202ENST00000377038 SOX12O15370 315 aa17.53■□□□□ 0.4
DFFA-202ENST00000377038 LAS1LQ9Y4W2 734 aaKnown RBP17.53■□□□□ 0.4
DFFA-202ENST00000377038 HSP90AA1P07900 732 aaKnown RBP17.51■□□□□ 0.39
DFFA-202ENST00000377038 NUTM2DQ5VT03 806 aaPredicted RBP17.51■□□□□ 0.39
DFFA-202ENST00000377038 TOPBP1Q92547 1522 aa17.51■□□□□ 0.39
DFFA-202ENST00000377038 PRDM2Q13029 1718 aa17.49■□□□□ 0.39
DFFA-202ENST00000377038 IFT140Q96RY7 1462 aa17.49■□□□□ 0.39
DFFA-202ENST00000377038 MORC1Q86VD1 984 aa17.48■□□□□ 0.39
DFFA-202ENST00000377038 L3MBTL2Q969R5 705 aa17.48■□□□□ 0.39
DFFA-202ENST00000377038 CUX1P39880 1505 aa17.47■□□□□ 0.39
DFFA-202ENST00000377038 ARXQ96QS3 562 aa17.47■□□□□ 0.39
DFFA-202ENST00000377038 POLA1P09884 1462 aaPredicted RBP17.46■□□□□ 0.39
DFFA-202ENST00000377038 KIF21BO75037 1637 aa17.45■□□□□ 0.38
DFFA-202ENST00000377038 HDGFL2Q7Z4V5 671 aaPredicted RBP17.45■□□□□ 0.38
DFFA-202ENST00000377038 FAM69CQ0P6D2 419 aa17.44■□□□□ 0.38
DFFA-202ENST00000377038 TOP2BQ02880 1626 aa17.44■□□□□ 0.38
DFFA-202ENST00000377038 EID1Q9Y6B2 187 aa17.44■□□□□ 0.38
DFFA-202ENST00000377038 EIF3AQ14152 1382 aaKnown RBP17.42■□□□□ 0.38
DFFA-202ENST00000377038 FTSJ3Q8IY81 847 aaKnown RBP17.42■□□□□ 0.38
DFFA-202ENST00000377038 PRG4Q92954 1404 aaPredicted RBP17.41■□□□□ 0.38
DFFA-202ENST00000377038 PNNQ9H307 717 aaKnown RBP17.41■□□□□ 0.38
DFFA-202ENST00000377038 SUPT16HQ9Y5B9 1047 aaKnown RBP17.41■□□□□ 0.38
DFFA-202ENST00000377038 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
DFFA-202ENST00000377038 ERICH3Q5RHP9 1530 aa17.4■□□□□ 0.38
DFFA-202ENST00000377038 CCDC144AA2RUR9 1427 aa17.4■□□□□ 0.38
DFFA-202ENST00000377038 ZNF644Q9H582 1327 aaPredicted RBP17.4■□□□□ 0.38
DFFA-202ENST00000377038 PAK3O75914 559 aaPredicted RBP17.4■□□□□ 0.38
DFFA-202ENST00000377038 KTN1Q86UP2 1357 aaKnown RBP17.39■□□□□ 0.37
DFFA-202ENST00000377038 DNMBPQ6XZF7 1577 aa17.39■□□□□ 0.37
DFFA-202ENST00000377038 SNAPC4Q5SXM2 1469 aa17.39■□□□□ 0.37
DFFA-202ENST00000377038 MYOM3Q5VTT5 1437 aa17.38■□□□□ 0.37
DFFA-202ENST00000377038 CASKIN1Q8WXD9 1431 aa17.38■□□□□ 0.37
DFFA-202ENST00000377038 FGD6Q6ZV73 1430 aa17.36■□□□□ 0.37
DFFA-202ENST00000377038 FRAT1Q92837 279 aaPredicted RBP17.36■□□□□ 0.37
DFFA-202ENST00000377038 DHX57Q6P158 1386 aaKnown RBP17.35■□□□□ 0.37
DFFA-202ENST00000377038 LRRC9Q6ZRR7 1453 aa17.35■□□□□ 0.37
DFFA-202ENST00000377038 PHLDB1Q86UU1 1377 aa17.33■□□□□ 0.37
DFFA-202ENST00000377038 TRAK1Q9UPV9 953 aa17.33■□□□□ 0.37
DFFA-202ENST00000377038 LAMC3Q9Y6N6 1575 aa17.32■□□□□ 0.36
DFFA-202ENST00000377038 SYNJ2O15056 1496 aa17.32■□□□□ 0.36
DFFA-202ENST00000377038 ARAP1Q96P48 1450 aa17.32■□□□□ 0.36
DFFA-202ENST00000377038 CCER2I3L3R5 266 aa17.32■□□□□ 0.36
DFFA-202ENST00000377038 NCOA2Q15596 1464 aa17.31■□□□□ 0.36
DFFA-202ENST00000377038 PRXQ9BXM0 1461 aa17.3■□□□□ 0.36
DFFA-202ENST00000377038 KIF15Q9NS87 1388 aa17.3■□□□□ 0.36
DFFA-202ENST00000377038 FYCO1Q9BQS8 1478 aa17.29■□□□□ 0.36
DFFA-202ENST00000377038 UACAQ9BZF9 1416 aa17.29■□□□□ 0.36
DFFA-202ENST00000377038 TERF2IPQ9NYB0 399 aa17.29■□□□□ 0.36
DFFA-202ENST00000377038 NUTM2FA1L443 756 aa17.28■□□□□ 0.36
DFFA-202ENST00000377038 ARHGAP5Q13017 1502 aa17.28■□□□□ 0.36
DFFA-202ENST00000377038 RALBP1Q15311 655 aa17.27■□□□□ 0.36
DFFA-202ENST00000377038 U2AF1L5P0DN76 240 aaPredicted RBP17.27■□□□□ 0.35
DFFA-202ENST00000377038 U2AF1Q01081 240 aaKnown RBP eCLIP17.27■□□□□ 0.35
DFFA-202ENST00000377038 VGFO15240 615 aaPredicted RBP17.26■□□□□ 0.35
DFFA-202ENST00000377038 EFCAB5A4FU69 1503 aa17.26■□□□□ 0.35
DFFA-202ENST00000377038 RTF1Q92541 710 aaKnown RBP17.26■□□□□ 0.35
DFFA-202ENST00000377038 NGDNQ8NEJ9 315 aaKnown RBP17.26■□□□□ 0.35
DFFA-202ENST00000377038 UNC13AQ9UPW8 1703 aa17.25■□□□□ 0.35
DFFA-202ENST00000377038 ST20-MTHFSA0A0A6YYL1 179 aa17.25■□□□□ 0.35
DFFA-202ENST00000377038 CSB-PGBD3P0DP91 1061 aa17.25■□□□□ 0.35
DFFA-202ENST00000377038 AFAP1Q8N556 730 aa17.23■□□□□ 0.35
DFFA-202ENST00000377038 NPHP1O15259 732 aa17.22■□□□□ 0.35
DFFA-202ENST00000377038 ABCA10Q8WWZ4 1543 aa17.22■□□□□ 0.35
DFFA-202ENST00000377038 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.21■□□□□ 0.35
DFFA-202ENST00000377038 MS4A1P11836 297 aa17.21■□□□□ 0.35
DFFA-202ENST00000377038 ANKRD50Q9ULJ7 1429 aa17.21■□□□□ 0.34
DFFA-202ENST00000377038 CHMP4BQ9H444 224 aaKnown RBP17.19■□□□□ 0.34
DFFA-202ENST00000377038 PPP4R2Q9NY27 417 aa17.17■□□□□ 0.34
DFFA-202ENST00000377038 OS9Q13438 667 aaPredicted RBP17.16■□□□□ 0.34
DFFA-202ENST00000377038 RGS3P49796 1198 aa17.16■□□□□ 0.34
DFFA-202ENST00000377038 PEG3Q9GZU2 1588 aa17.16■□□□□ 0.34
DFFA-202ENST00000377038 USP47Q96K76 1375 aa17.15■□□□□ 0.34
DFFA-202ENST00000377038 CASC1Q6TDU7 716 aa17.15■□□□□ 0.34
DFFA-202ENST00000377038 KIAA0586Q9BVV6 1533 aa17.15■□□□□ 0.34
DFFA-202ENST00000377038 HECW1Q76N89 1606 aa17.15■□□□□ 0.34
DFFA-202ENST00000377038 MINK1Q8N4C8 1332 aaPredicted RBP17.15■□□□□ 0.34
DFFA-202ENST00000377038 EHBP1L1Q8N3D4 1523 aa17.15■□□□□ 0.34
DFFA-202ENST00000377038 ANP32BQ92688 251 aaKnown RBP17.15■□□□□ 0.34
DFFA-202ENST00000377038 PANK3Q9H999 370 aa17.15■□□□□ 0.34
DFFA-202ENST00000377038 EVC2Q86UK5 1308 aa17.14■□□□□ 0.33
DFFA-202ENST00000377038 AMPHP49418 695 aa17.13■□□□□ 0.33
DFFA-202ENST00000377038 TROQ12816 1431 aaPredicted RBP17.12■□□□□ 0.33
DFFA-202ENST00000377038 NLRP13Q86W25 1043 aa17.12■□□□□ 0.33
DFFA-202ENST00000377038 CALD1Q05682 793 aaKnown RBP17.12■□□□□ 0.33
DFFA-202ENST00000377038 CCDC146Q8IYE0 955 aa17.11■□□□□ 0.33
DFFA-202ENST00000377038 CCDC9Q9Y3X0 531 aaKnown RBP17.11■□□□□ 0.33
DFFA-202ENST00000377038 URB2Q14146 1524 aaKnown RBP17.11■□□□□ 0.33
DFFA-202ENST00000377038 LTV1Q96GA3 475 aaPredicted RBP17.11■□□□□ 0.33
DFFA-202ENST00000377038 BECN1Q14457 450 aa17.11■□□□□ 0.33
DFFA-202ENST00000377038 B4GALNT3Q6L9W6 998 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms