RNA–Protein interactions for RNA: ENST00000377038.7

DFFA-202, Transcript of DNA fragmentation factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DFFA, Length 6,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-202ENST00000377038 NISCHQ9Y2I1 1504 aa24.16■■□□□ 1.46
DFFA-202ENST00000377038 DCAF8L2P0C7V8 631 aa24.11■■□□□ 1.45
DFFA-202ENST00000377038 SUPT5HO00267 1087 aaKnown RBP22.62■■□□□ 1.21
DFFA-202ENST00000377038 SHROOM4Q9ULL8 1493 aa22.6■■□□□ 1.21
DFFA-202ENST00000377038 EHMT2Q96KQ7 1210 aa21.7■■□□□ 1.06
DFFA-202ENST00000377038 FAM9AQ8IZU1 332 aaPredicted RBP21.27■■□□□ 1
DFFA-202ENST00000377038 APLP2Q06481 763 aa21.11■□□□□ 0.97
DFFA-202ENST00000377038 TRIM41Q8WV44 630 aa21.01■□□□□ 0.95
DFFA-202ENST00000377038 ABCC9O60706 1549 aa20.92■□□□□ 0.94
DFFA-202ENST00000377038 RANGAP1P46060 587 aaPredicted RBP20.91■□□□□ 0.94
DFFA-202ENST00000377038 TTBK1Q5TCY1 1321 aaPredicted RBP20.87■□□□□ 0.93
DFFA-202ENST00000377038 UBTFP17480 764 aaKnown RBP20.68■□□□□ 0.9
DFFA-202ENST00000377038 ATP1B4Q9UN42 357 aaPredicted RBP20.66■□□□□ 0.9
DFFA-202ENST00000377038 PABPN1Q86U42 306 aaKnown RBP eCLIP20.59■□□□□ 0.89
DFFA-202ENST00000377038 PCGF6Q9BYE7 350 aa20.55■□□□□ 0.88
DFFA-202ENST00000377038 PPARGC1BQ86YN6 1023 aaKnown RBP20.21■□□□□ 0.83
DFFA-202ENST00000377038 CHIC1Q5VXU3 224 aa20.21■□□□□ 0.83
DFFA-202ENST00000377038 CCER1Q8TC90 406 aaPredicted RBP20.2■□□□□ 0.82
DFFA-202ENST00000377038 LOC105371045A0A1W2PR82 267 aa20.09■□□□□ 0.81
DFFA-202ENST00000377038 CCDC180Q9P1Z9 1646 aa20.08■□□□□ 0.8
DFFA-202ENST00000377038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.06■□□□□ 0.8
DFFA-202ENST00000377038 HNRNPUL2Q1KMD3 747 aaKnown RBP20.06■□□□□ 0.8
DFFA-202ENST00000377038 ZCCHC6Q5VYS8 1495 aaKnown RBP20.01■□□□□ 0.79
DFFA-202ENST00000377038 ZEB1P37275 1124 aaPredicted RBP20.01■□□□□ 0.79
DFFA-202ENST00000377038 SCRIBQ14160 1630 aa20■□□□□ 0.79
DFFA-202ENST00000377038 ITGAEP38570 1179 aa19.89■□□□□ 0.78
DFFA-202ENST00000377038 MYT1LQ9UL68 1186 aa19.86■□□□□ 0.77
DFFA-202ENST00000377038 TRIM26Q12899 539 aaPredicted RBP19.86■□□□□ 0.77
DFFA-202ENST00000377038 PELP1Q8IZL8 1130 aaKnown RBP19.84■□□□□ 0.77
DFFA-202ENST00000377038 FBLN2P98095 1184 aa19.66■□□□□ 0.74
DFFA-202ENST00000377038 RB1CC1Q8TDY2 1594 aa19.65■□□□□ 0.74
DFFA-202ENST00000377038 CENPBP07199 599 aaPredicted RBP19.55■□□□□ 0.72
DFFA-202ENST00000377038 FAM50AQ14320 339 aaKnown RBP19.51■□□□□ 0.71
DFFA-202ENST00000377038 NACADO15069 1562 aa19.46■□□□□ 0.71
DFFA-202ENST00000377038 CSRNP3Q8WYN3 585 aa19.43■□□□□ 0.7
DFFA-202ENST00000377038 YTHDC1Q96MU7 727 aaKnown RBP19.43■□□□□ 0.7
DFFA-202ENST00000377038 POLR3GLQ9BT43 218 aa19.42■□□□□ 0.7
DFFA-202ENST00000377038 P3H3Q8IVL6 736 aa19.39■□□□□ 0.7
DFFA-202ENST00000377038 HRCP23327 699 aa19.33■□□□□ 0.68
DFFA-202ENST00000377038 ARID3CA6NKF2 412 aa19.32■□□□□ 0.68
DFFA-202ENST00000377038 TRIM52Q96A61 297 aa19.31■□□□□ 0.68
DFFA-202ENST00000377038 NEFLP07196 543 aa19.22■□□□□ 0.67
DFFA-202ENST00000377038 CNGB1Q14028 1251 aaPredicted RBP19.21■□□□□ 0.67
DFFA-202ENST00000377038 RSF1Q96T23 1441 aaPredicted RBP19.2■□□□□ 0.66
DFFA-202ENST00000377038 NEUROD1Q13562 356 aa19.15■□□□□ 0.66
DFFA-202ENST00000377038 DCAF1Q9Y4B6 1507 aa19.12■□□□□ 0.65
DFFA-202ENST00000377038 BAZ1BQ9UIG0 1483 aaKnown RBP19.12■□□□□ 0.65
DFFA-202ENST00000377038 SLC4A1APQ9BWU0 796 aaKnown RBP19.11■□□□□ 0.65
DFFA-202ENST00000377038 ZNF777Q9ULD5 760 aaPredicted RBP19.08■□□□□ 0.64
DFFA-202ENST00000377038 CDK11AQ9UQ88 783 aaPredicted RBP19.06■□□□□ 0.64
DFFA-202ENST00000377038 ZNF326Q5BKZ1 582 aaKnown RBP19.01■□□□□ 0.63
DFFA-202ENST00000377038 ERICH6Q7L0X2 663 aa18.98■□□□□ 0.63
DFFA-202ENST00000377038 BAZ1AQ9NRL2 1556 aaPredicted RBP18.98■□□□□ 0.63
DFFA-202ENST00000377038 CHMP7Q8WUX9 453 aaPredicted RBP18.97■□□□□ 0.63
DFFA-202ENST00000377038 CECR2Q9BXF3 1484 aa18.97■□□□□ 0.63
DFFA-202ENST00000377038 NPM1P06748 294 aaKnown RBP eCLIP18.91■□□□□ 0.62
DFFA-202ENST00000377038 DIEXFQ68CQ4 756 aaKnown RBP18.89■□□□□ 0.61
DFFA-202ENST00000377038 WRNQ14191 1432 aaPredicted RBP eCLIP18.88■□□□□ 0.61
DFFA-202ENST00000377038 ERCC6Q03468 1493 aa18.81■□□□□ 0.6
DFFA-202ENST00000377038 BCANQ96GW7 911 aa18.78■□□□□ 0.6
DFFA-202ENST00000377038 CLIP1P30622 1438 aa18.77■□□□□ 0.6
DFFA-202ENST00000377038 EEA1Q15075 1411 aa18.74■□□□□ 0.59
DFFA-202ENST00000377038 ESF1Q9H501 851 aaKnown RBP18.73■□□□□ 0.59
DFFA-202ENST00000377038 MROH2BQ7Z745 1585 aa18.73■□□□□ 0.59
DFFA-202ENST00000377038 KIF27Q86VH2 1401 aa18.72■□□□□ 0.59
DFFA-202ENST00000377038 MTUS2Q5JR59 1369 aa18.72■□□□□ 0.59
DFFA-202ENST00000377038 GOLGA3Q08378 1498 aa18.72■□□□□ 0.59
DFFA-202ENST00000377038 CHIC2Q9UKJ5 165 aa18.71■□□□□ 0.59
DFFA-202ENST00000377038 MYO15BQ96JP2 1530 aa18.66■□□□□ 0.58
DFFA-202ENST00000377038 ANP32CO43423 234 aa18.65■□□□□ 0.58
DFFA-202ENST00000377038 PLPPR3Q6T4P5 718 aa18.64■□□□□ 0.57
DFFA-202ENST00000377038 CHGAP10645 457 aaKnown RBP18.63■□□□□ 0.57
DFFA-202ENST00000377038 SMARCA2P51531 1590 aa18.63■□□□□ 0.57
DFFA-202ENST00000377038 CEP162Q5TB80 1403 aa18.62■□□□□ 0.57
DFFA-202ENST00000377038 ZNF316A6NFI3 1004 aaPredicted RBP18.62■□□□□ 0.57
DFFA-202ENST00000377038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.62■□□□□ 0.57
DFFA-202ENST00000377038 TSPY4P0CV99 314 aa18.6■□□□□ 0.57
DFFA-202ENST00000377038 TSPY10P0CW01 314 aa18.6■□□□□ 0.57
DFFA-202ENST00000377038 CCDC88BA6NC98 1476 aa18.6■□□□□ 0.57
DFFA-202ENST00000377038 KCNH8Q96L42 1107 aa18.59■□□□□ 0.57
DFFA-202ENST00000377038 STAG3Q9UJ98 1225 aa18.59■□□□□ 0.57
DFFA-202ENST00000377038 TONSLQ96HA7 1378 aa18.57■□□□□ 0.56
DFFA-202ENST00000377038 CEP164Q9UPV0 1460 aa18.57■□□□□ 0.56
DFFA-202ENST00000377038 PLEKHD1A6NEE1 506 aa18.54■□□□□ 0.56
DFFA-202ENST00000377038 CUX2O14529 1486 aa18.52■□□□□ 0.55
DFFA-202ENST00000377038 TNIKQ9UKE5 1360 aa18.5■□□□□ 0.55
DFFA-202ENST00000377038 WIZO95785 1651 aa18.49■□□□□ 0.55
DFFA-202ENST00000377038 DAXXQ9UER7 740 aaPredicted RBP18.48■□□□□ 0.55
DFFA-202ENST00000377038 PDS5BQ9NTI5 1447 aa18.46■□□□□ 0.55
DFFA-202ENST00000377038 SOGA1O94964 1423 aa18.46■□□□□ 0.55
DFFA-202ENST00000377038 RRP7BPQ9NSQ0 103 aa18.46■□□□□ 0.55
DFFA-202ENST00000377038 ABCC8Q09428 1581 aa18.45■□□□□ 0.54
DFFA-202ENST00000377038 CARMIL1Q5VZK9 1371 aa18.45■□□□□ 0.54
DFFA-202ENST00000377038 TOP2AP11388 1531 aaKnown RBP18.44■□□□□ 0.54
DFFA-202ENST00000377038 EIF4G1Q04637 1599 aaKnown RBP18.43■□□□□ 0.54
DFFA-202ENST00000377038 CLSPNQ9HAW4 1339 aa18.39■□□□□ 0.53
DFFA-202ENST00000377038 CFDP1Q9UEE9 299 aaPredicted RBP18.39■□□□□ 0.53
DFFA-202ENST00000377038 SLC24A1O60721 1099 aa18.38■□□□□ 0.53
DFFA-202ENST00000377038 KDM2AQ9Y2K7 1162 aa18.37■□□□□ 0.53
DFFA-202ENST00000377038 NEFMP07197 916 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms