RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 ROCK2O75116 1388 aaKnown RBP21.76■■□□□ 1.07
VARS-215ENST00000375663 TNNT2P45379 298 aaPredicted RBP21.76■■□□□ 1.07
VARS-215ENST00000375663 MYH16Q9H6N6 1097 aa21.75■■□□□ 1.07
VARS-215ENST00000375663 ANKRD30AQ9BXX3 1397 aa21.75■■□□□ 1.07
VARS-215ENST00000375663 FGD6Q6ZV73 1430 aa21.74■■□□□ 1.07
VARS-215ENST00000375663 ERICH3Q5RHP9 1530 aa21.74■■□□□ 1.07
VARS-215ENST00000375663 TRIM44Q96DX7 344 aaPredicted RBP21.73■■□□□ 1.07
VARS-215ENST00000375663 UACAQ9BZF9 1416 aa21.72■■□□□ 1.07
VARS-215ENST00000375663 PDE3BQ13370 1112 aa21.71■■□□□ 1.07
VARS-215ENST00000375663 PRXQ9BXM0 1461 aa21.7■■□□□ 1.06
VARS-215ENST00000375663 ST20-MTHFSA0A0A6YYL1 179 aa21.7■■□□□ 1.06
VARS-215ENST00000375663 WASHC2AQ641Q2 1341 aa21.69■■□□□ 1.06
VARS-215ENST00000375663 ESF1Q9H501 851 aaKnown RBP21.68■■□□□ 1.06
VARS-215ENST00000375663 CCDC7Q96M83 1385 aa21.66■■□□□ 1.06
VARS-215ENST00000375663 PDS5BQ9NTI5 1447 aa21.66■■□□□ 1.06
VARS-215ENST00000375663 FGD5Q6ZNL6 1462 aa21.66■■□□□ 1.06
VARS-215ENST00000375663 GOLGA6L22H0YM25 854 aa21.66■■□□□ 1.06
VARS-215ENST00000375663 KIF15Q9NS87 1388 aa21.66■■□□□ 1.06
VARS-215ENST00000375663 MYBBP1AQ9BQG0 1328 aaKnown RBP21.66■■□□□ 1.06
VARS-215ENST00000375663 EXOC6Q8TAG9 804 aa21.64■■□□□ 1.06
VARS-215ENST00000375663 USP47Q96K76 1375 aa21.64■■□□□ 1.06
VARS-215ENST00000375663 PDE4AP27815 886 aa21.63■■□□□ 1.05
VARS-215ENST00000375663 KIF7Q2M1P5 1343 aa21.63■■□□□ 1.05
VARS-215ENST00000375663 MAPK8IP3Q9UPT6 1336 aa21.63■■□□□ 1.05
VARS-215ENST00000375663 MYOM3Q5VTT5 1437 aa21.62■■□□□ 1.05
VARS-215ENST00000375663 FANCD2Q9BXW9 1451 aa21.62■■□□□ 1.05
VARS-215ENST00000375663 RRP1P56182 461 aaKnown RBP21.61■■□□□ 1.05
VARS-215ENST00000375663 CNTLNQ9NXG0 1405 aa21.61■■□□□ 1.05
VARS-215ENST00000375663 GOLGA2Q08379 1002 aa21.59■■□□□ 1.05
VARS-215ENST00000375663 MS4A1P11836 297 aa21.59■■□□□ 1.05
VARS-215ENST00000375663 U2SURPO15042 1029 aaKnown RBP21.58■■□□□ 1.05
VARS-215ENST00000375663 PLIN1O60240 522 aa21.58■■□□□ 1.04
VARS-215ENST00000375663 HNRNPMP52272 730 aaKnown RBP eCLIP21.58■■□□□ 1.04
VARS-215ENST00000375663 CARMIL2Q6F5E8 1435 aa21.57■■□□□ 1.04
VARS-215ENST00000375663 MORC1Q86VD1 984 aa21.57■■□□□ 1.04
VARS-215ENST00000375663 NCLP19338 710 aaKnown RBP21.57■■□□□ 1.04
VARS-215ENST00000375663 WDR97A6NE52 1622 aa21.56■■□□□ 1.04
VARS-215ENST00000375663 NAP1L5Q96NT1 182 aaPredicted RBP21.56■■□□□ 1.04
VARS-215ENST00000375663 SLKQ9H2G2 1235 aaPredicted RBP21.56■■□□□ 1.04
VARS-215ENST00000375663 CASKIN1Q8WXD9 1431 aa21.56■■□□□ 1.04
VARS-215ENST00000375663 SPRYD3Q8NCJ5 442 aa21.54■■□□□ 1.04
VARS-215ENST00000375663 USP35Q9P2H5 1018 aa21.54■■□□□ 1.04
VARS-215ENST00000375663 RAD54L2Q9Y4B4 1467 aa21.54■■□□□ 1.04
VARS-215ENST00000375663 TOP2BQ02880 1626 aa21.53■■□□□ 1.04
VARS-215ENST00000375663 NCAPD3P42695 1498 aa21.52■■□□□ 1.04
VARS-215ENST00000375663 PANK3Q9H999 370 aa21.52■■□□□ 1.04
VARS-215ENST00000375663 L1TD1Q5T7N2 865 aaKnown RBP21.51■■□□□ 1.03
VARS-215ENST00000375663 HSP90AB1P08238 724 aaKnown RBP21.51■■□□□ 1.03
VARS-215ENST00000375663 ERCC6Q03468 1493 aa21.5■■□□□ 1.03
VARS-215ENST00000375663 NCOA2Q15596 1464 aa21.5■■□□□ 1.03
VARS-215ENST00000375663 HSCBQ8IWL3 235 aa21.5■■□□□ 1.03
VARS-215ENST00000375663 CCDC146Q8IYE0 955 aa21.5■■□□□ 1.03
VARS-215ENST00000375663 ZNF644Q9H582 1327 aaPredicted RBP21.49■■□□□ 1.03
VARS-215ENST00000375663 CUX1P39880 1505 aa21.49■■□□□ 1.03
VARS-215ENST00000375663 CRBNQ96SW2 442 aa21.49■■□□□ 1.03
VARS-215ENST00000375663 SLC4A3P48751 1232 aa21.48■■□□□ 1.03
VARS-215ENST00000375663 PLEKHG5O94827 1062 aa21.47■■□□□ 1.03
VARS-215ENST00000375663 KANK1Q14678 1352 aa21.46■■□□□ 1.03
VARS-215ENST00000375663 TIAM1Q13009 1591 aa21.46■■□□□ 1.03
VARS-215ENST00000375663 CCDC184Q52MB2 194 aa21.46■■□□□ 1.03
VARS-215ENST00000375663 FYCO1Q9BQS8 1478 aa21.45■■□□□ 1.02
VARS-215ENST00000375663 CENPQQ7L2Z9 268 aaPredicted RBP21.45■■□□□ 1.02
VARS-215ENST00000375663 POGKQ9P215 609 aa21.45■■□□□ 1.02
VARS-215ENST00000375663 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.44■■□□□ 1.02
VARS-215ENST00000375663 RWDD1Q9H446 243 aaPredicted RBP21.44■■□□□ 1.02
VARS-215ENST00000375663 CHMP4BQ9H444 224 aaKnown RBP21.44■■□□□ 1.02
VARS-215ENST00000375663 RSPH4AQ5TD94 716 aa21.43■■□□□ 1.02
VARS-215ENST00000375663 CFTRP13569 1480 aa21.43■■□□□ 1.02
VARS-215ENST00000375663 FAM161AQ3B820 660 aa21.43■■□□□ 1.02
VARS-215ENST00000375663 CCDC144AA2RUR9 1427 aa21.43■■□□□ 1.02
VARS-215ENST00000375663 HFM1A2PYH4 1435 aa21.42■■□□□ 1.02
VARS-215ENST00000375663 U2AF1L5P0DN76 240 aaPredicted RBP21.42■■□□□ 1.02
VARS-215ENST00000375663 U2AF1Q01081 240 aaKnown RBP eCLIP21.42■■□□□ 1.02
VARS-215ENST00000375663 CASC1Q6TDU7 716 aa21.42■■□□□ 1.02
VARS-215ENST00000375663 JPH4Q96JJ6 628 aa21.42■■□□□ 1.02
VARS-215ENST00000375663 GAPVD1Q14C86 1478 aa21.42■■□□□ 1.02
VARS-215ENST00000375663 GZF1Q9H116 711 aaPredicted RBP21.41■■□□□ 1.02
VARS-215ENST00000375663 ARID4BQ4LE39 1312 aaPredicted RBP21.41■■□□□ 1.02
VARS-215ENST00000375663 CLUAP1Q96AJ1 413 aa21.41■■□□□ 1.02
VARS-215ENST00000375663 NBPF8Q3BBV2 869 aa21.4■■□□□ 1.02
VARS-215ENST00000375663 CENPJQ9HC77 1338 aaPredicted RBP21.4■■□□□ 1.02
VARS-215ENST00000375663 SAFB2Q14151 953 aaKnown RBP eCLIP21.4■■□□□ 1.02
VARS-215ENST00000375663 EFCAB2Q5VUJ9 269 aa21.4■■□□□ 1.02
VARS-215ENST00000375663 PMFBP1Q8TBY8 1022 aa21.4■■□□□ 1.02
VARS-215ENST00000375663 PTMAP06454 111 aaKnown RBP21.38■■□□□ 1.01
VARS-215ENST00000375663 GSE1Q14687 1217 aa21.38■■□□□ 1.01
VARS-215ENST00000375663 PNNQ9H307 717 aaKnown RBP21.38■■□□□ 1.01
VARS-215ENST00000375663 SRPK2P78362 688 aaKnown RBP21.37■■□□□ 1.01
VARS-215ENST00000375663 PAK3O75914 559 aaPredicted RBP21.35■■□□□ 1.01
VARS-215ENST00000375663 AKNAQ7Z591 1439 aa21.34■■□□□ 1.01
VARS-215ENST00000375663 ITPRIPQ8IWB1 547 aa21.34■■□□□ 1.01
VARS-215ENST00000375663 IPO8O15397 1037 aaKnown RBP21.33■■□□□ 1.01
VARS-215ENST00000375663 EIF3AQ14152 1382 aaKnown RBP21.33■■□□□ 1.01
VARS-215ENST00000375663 MFAP1P55081 439 aaKnown RBP21.33■■□□□ 1
VARS-215ENST00000375663 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.32■■□□□ 1
VARS-215ENST00000375663 APAF1O14727 1248 aa21.31■■□□□ 1
VARS-215ENST00000375663 MSH5O43196 834 aa21.31■■□□□ 1
VARS-215ENST00000375663 BRD4O60885 1362 aaPredicted RBP21.31■■□□□ 1
VARS-215ENST00000375663 GGT6Q6P531 493 aa21.31■■□□□ 1
VARS-215ENST00000375663 TPRNQ4KMQ1 711 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms