RNA–Protein interactions for RNA: ENST00000372647.6

CUL9-202, Transcript of cullin 9, humanhuman

TSL 1 (best) BASIC

Gene CUL9, Length 7,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL9-202ENST00000372647 SPRYD3Q8NCJ5 442 aa13.03□□□□□ -0.32
CUL9-202ENST00000372647 CARMIL2Q6F5E8 1435 aa13.02□□□□□ -0.33
CUL9-202ENST00000372647 KANK1Q14678 1352 aa13.02□□□□□ -0.33
CUL9-202ENST00000372647 KTN1Q86UP2 1357 aaKnown RBP13.02□□□□□ -0.33
CUL9-202ENST00000372647 RCAN3Q9UKA8 241 aa13.01□□□□□ -0.33
CUL9-202ENST00000372647 GGT6Q6P531 493 aa13.01□□□□□ -0.33
CUL9-202ENST00000372647 NUP155O75694 1391 aa13.01□□□□□ -0.33
CUL9-202ENST00000372647 U2SURPO15042 1029 aaKnown RBP13□□□□□ -0.33
CUL9-202ENST00000372647 NCLP19338 710 aaKnown RBP13□□□□□ -0.33
CUL9-202ENST00000372647 HDGFP51858 240 aaKnown RBP13□□□□□ -0.33
CUL9-202ENST00000372647 SAFB2Q14151 953 aaKnown RBP eCLIP12.99□□□□□ -0.33
CUL9-202ENST00000372647 TRIM44Q96DX7 344 aaPredicted RBP12.99□□□□□ -0.33
CUL9-202ENST00000372647 NPHP1O15259 732 aa12.99□□□□□ -0.33
CUL9-202ENST00000372647 HNRNPMP52272 730 aaKnown RBP eCLIP12.98□□□□□ -0.33
CUL9-202ENST00000372647 CADPSQ9ULU8 1353 aa12.98□□□□□ -0.33
CUL9-202ENST00000372647 FGD5Q6ZNL6 1462 aa12.97□□□□□ -0.33
CUL9-202ENST00000372647 MAPK8IP3Q9UPT6 1336 aa12.97□□□□□ -0.33
CUL9-202ENST00000372647 FANCD2Q9BXW9 1451 aa12.97□□□□□ -0.33
CUL9-202ENST00000372647 NUDCQ9Y266 331 aa12.96□□□□□ -0.33
CUL9-202ENST00000372647 GLIPR1L2Q4G1C9 344 aa12.95□□□□□ -0.34
CUL9-202ENST00000372647 CCDC146Q8IYE0 955 aa12.94□□□□□ -0.34
CUL9-202ENST00000372647 RAD54L2Q9Y4B4 1467 aa12.94□□□□□ -0.34
CUL9-202ENST00000372647 LRRC9Q6ZRR7 1453 aa12.94□□□□□ -0.34
CUL9-202ENST00000372647 CYB5RLQ6IPT4 315 aa12.94□□□□□ -0.34
CUL9-202ENST00000372647 ANKRD30AQ9BXX3 1397 aa12.93□□□□□ -0.34
CUL9-202ENST00000372647 RALBP1Q15311 655 aa12.93□□□□□ -0.34
CUL9-202ENST00000372647 AEBP2Q6ZN18 517 aaPredicted RBP12.93□□□□□ -0.34
CUL9-202ENST00000372647 ARAP1Q96P48 1450 aa12.93□□□□□ -0.34
CUL9-202ENST00000372647 MORC1Q86VD1 984 aa12.92□□□□□ -0.34
CUL9-202ENST00000372647 PHLDB1Q86UU1 1377 aa12.92□□□□□ -0.34
CUL9-202ENST00000372647 SOX12O15370 315 aa12.92□□□□□ -0.34
CUL9-202ENST00000372647 HSP90AB1P08238 724 aaKnown RBP12.92□□□□□ -0.34
CUL9-202ENST00000372647 TOP2BQ02880 1626 aa12.92□□□□□ -0.34
CUL9-202ENST00000372647 ERICH6BQ5W0A0 696 aa12.91□□□□□ -0.34
CUL9-202ENST00000372647 GOLGA6L22H0YM25 854 aa12.91□□□□□ -0.34
CUL9-202ENST00000372647 STK26Q9P289 416 aa12.9□□□□□ -0.34
CUL9-202ENST00000372647 PLIN1O60240 522 aa12.9□□□□□ -0.34
CUL9-202ENST00000372647 SRPK2P78362 688 aaKnown RBP12.9□□□□□ -0.34
CUL9-202ENST00000372647 WDR97A6NE52 1622 aa12.9□□□□□ -0.34
CUL9-202ENST00000372647 NAP1L5Q96NT1 182 aaPredicted RBP12.89□□□□□ -0.35
CUL9-202ENST00000372647 CASC1Q6TDU7 716 aa12.89□□□□□ -0.35
CUL9-202ENST00000372647 IPO9Q96P70 1041 aaKnown RBP12.89□□□□□ -0.35
CUL9-202ENST00000372647 ST20-MTHFSA0A0A6YYL1 179 aa12.89□□□□□ -0.35
CUL9-202ENST00000372647 ERICH3Q5RHP9 1530 aa12.88□□□□□ -0.35
CUL9-202ENST00000372647 IGF1RP08069 1367 aa12.88□□□□□ -0.35
CUL9-202ENST00000372647 PRKRIP1Q9H875 184 aaPredicted RBP12.88□□□□□ -0.35
CUL9-202ENST00000372647 CUX1P39880 1505 aa12.88□□□□□ -0.35
CUL9-202ENST00000372647 KIF15Q9NS87 1388 aa12.87□□□□□ -0.35
CUL9-202ENST00000372647 TCERG1O14776 1098 aaKnown RBP12.86□□□□□ -0.35
CUL9-202ENST00000372647 USP47Q96K76 1375 aa12.86□□□□□ -0.35
CUL9-202ENST00000372647 FGD6Q6ZV73 1430 aa12.86□□□□□ -0.35
CUL9-202ENST00000372647 OSCARQ8IYS5 282 aa12.86□□□□□ -0.35
CUL9-202ENST00000372647 PAK3O75914 559 aaPredicted RBP12.85□□□□□ -0.35
CUL9-202ENST00000372647 EFCAB2Q5VUJ9 269 aa12.85□□□□□ -0.35
CUL9-202ENST00000372647 SLKQ9H2G2 1235 aaPredicted RBP12.85□□□□□ -0.35
CUL9-202ENST00000372647 ZBED9Q6R2W3 1325 aa12.85□□□□□ -0.35
CUL9-202ENST00000372647 NUTM2DQ5VT03 806 aaPredicted RBP12.84□□□□□ -0.35
CUL9-202ENST00000372647 GZF1Q9H116 711 aaPredicted RBP12.84□□□□□ -0.35
CUL9-202ENST00000372647 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.84□□□□□ -0.35
CUL9-202ENST00000372647 HSCBQ8IWL3 235 aa12.84□□□□□ -0.35
CUL9-202ENST00000372647 GAPVD1Q14C86 1478 aa12.84□□□□□ -0.35
CUL9-202ENST00000372647 SUPT6HQ7KZ85 1726 aaKnown RBP12.84□□□□□ -0.35
CUL9-202ENST00000372647 PTMAP06454 111 aaKnown RBP12.83□□□□□ -0.36
CUL9-202ENST00000372647 PANK3Q9H999 370 aa12.83□□□□□ -0.36
CUL9-202ENST00000372647 MYBBP1AQ9BQG0 1328 aaKnown RBP12.83□□□□□ -0.36
CUL9-202ENST00000372647 JPH4Q96JJ6 628 aa12.83□□□□□ -0.36
CUL9-202ENST00000372647 ZNF644Q9H582 1327 aaPredicted RBP12.82□□□□□ -0.36
CUL9-202ENST00000372647 TIAM1Q13009 1591 aa12.82□□□□□ -0.36
CUL9-202ENST00000372647 EXOC6Q8TAG9 804 aa12.82□□□□□ -0.36
CUL9-202ENST00000372647 RRBP1Q9P2E9 1410 aaKnown RBP12.82□□□□□ -0.36
CUL9-202ENST00000372647 APBB1O00213 710 aa12.81□□□□□ -0.36
CUL9-202ENST00000372647 NLRP13Q86W25 1043 aa12.81□□□□□ -0.36
CUL9-202ENST00000372647 U2AF1L5P0DN76 240 aaPredicted RBP12.81□□□□□ -0.36
CUL9-202ENST00000372647 SLC4A3P48751 1232 aa12.81□□□□□ -0.36
CUL9-202ENST00000372647 U2AF1Q01081 240 aaKnown RBP eCLIP12.81□□□□□ -0.36
CUL9-202ENST00000372647 DNTTIP2Q5QJE6 756 aaKnown RBP12.81□□□□□ -0.36
CUL9-202ENST00000372647 ITPRIPQ8IWB1 547 aa12.81□□□□□ -0.36
CUL9-202ENST00000372647 CCDC9Q9Y3X0 531 aaKnown RBP12.81□□□□□ -0.36
CUL9-202ENST00000372647 UACAQ9BZF9 1416 aa12.8□□□□□ -0.36
CUL9-202ENST00000372647 GOLGA2Q08379 1002 aa12.8□□□□□ -0.36
CUL9-202ENST00000372647 WASHC2AQ641Q2 1341 aa12.8□□□□□ -0.36
CUL9-202ENST00000372647 MS4A1P11836 297 aa12.8□□□□□ -0.36
CUL9-202ENST00000372647 MYOM3Q5VTT5 1437 aa12.8□□□□□ -0.36
CUL9-202ENST00000372647 CLUAP1Q96AJ1 413 aa12.79□□□□□ -0.36
CUL9-202ENST00000372647 CRBNQ96SW2 442 aa12.79□□□□□ -0.36
CUL9-202ENST00000372647 TAOK2Q9UL54 1235 aa12.79□□□□□ -0.36
CUL9-202ENST00000372647 RRP7AQ9Y3A4 280 aaKnown RBP12.79□□□□□ -0.36
CUL9-202ENST00000372647 EID1Q9Y6B2 187 aa12.79□□□□□ -0.36
CUL9-202ENST00000372647 NCOA2Q15596 1464 aa12.79□□□□□ -0.36
CUL9-202ENST00000372647 PNNQ9H307 717 aaKnown RBP12.79□□□□□ -0.36
CUL9-202ENST00000372647 RRP1P56182 461 aaKnown RBP12.79□□□□□ -0.36
CUL9-202ENST00000372647 CCDC144AA2RUR9 1427 aa12.79□□□□□ -0.36
CUL9-202ENST00000372647 KIF3BO15066 747 aa12.78□□□□□ -0.36
CUL9-202ENST00000372647 PLCB2Q00722 1185 aa12.78□□□□□ -0.36
CUL9-202ENST00000372647 FYCO1Q9BQS8 1478 aa12.77□□□□□ -0.36
CUL9-202ENST00000372647 CCDC7Q96M83 1385 aa12.77□□□□□ -0.36
CUL9-202ENST00000372647 CNTLNQ9NXG0 1405 aa12.77□□□□□ -0.37
CUL9-202ENST00000372647 KIF7Q2M1P5 1343 aa12.77□□□□□ -0.37
CUL9-202ENST00000372647 MFAP1P55081 439 aaKnown RBP12.77□□□□□ -0.37
CUL9-202ENST00000372647 PCF11O94913 1555 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms