RNA–Protein interactions for RNA: ENST00000372647.6

CUL9-202, Transcript of cullin 9, humanhuman

TSL 1 (best) BASIC

Gene CUL9, Length 7,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL9-202ENST00000372647 DCAF8L2P0C7V8 631 aa17.71■□□□□ 0.42
CUL9-202ENST00000372647 NISCHQ9Y2I1 1504 aa17.6■□□□□ 0.41
CUL9-202ENST00000372647 SUPT5HO00267 1087 aaKnown RBP16.92■□□□□ 0.3
CUL9-202ENST00000372647 SHROOM4Q9ULL8 1493 aa16.88■□□□□ 0.29
CUL9-202ENST00000372647 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
CUL9-202ENST00000372647 PCGF6Q9BYE7 350 aa16.04■□□□□ 0.16
CUL9-202ENST00000372647 FAM9AQ8IZU1 332 aaPredicted RBP15.93■□□□□ 0.14
CUL9-202ENST00000372647 TTBK1Q5TCY1 1321 aaPredicted RBP15.84■□□□□ 0.13
CUL9-202ENST00000372647 TRIM41Q8WV44 630 aa15.58■□□□□ 0.09
CUL9-202ENST00000372647 APLP2Q06481 763 aa15.53■□□□□ 0.08
CUL9-202ENST00000372647 RANGAP1P46060 587 aaPredicted RBP15.52■□□□□ 0.07
CUL9-202ENST00000372647 PPARGC1BQ86YN6 1023 aaKnown RBP15.49■□□□□ 0.07
CUL9-202ENST00000372647 CCER1Q8TC90 406 aaPredicted RBP15.47■□□□□ 0.07
CUL9-202ENST00000372647 LOC105371045A0A1W2PR82 267 aa15.4■□□□□ 0.06
CUL9-202ENST00000372647 ZEB1P37275 1124 aaPredicted RBP15.4■□□□□ 0.06
CUL9-202ENST00000372647 PELP1Q8IZL8 1130 aaKnown RBP15.35■□□□□ 0.05
CUL9-202ENST00000372647 HRCP23327 699 aa15.33■□□□□ 0.05
CUL9-202ENST00000372647 ATP1B4Q9UN42 357 aaPredicted RBP15.29■□□□□ 0.04
CUL9-202ENST00000372647 TRIM26Q12899 539 aaPredicted RBP15.29■□□□□ 0.04
CUL9-202ENST00000372647 UBTFP17480 764 aaKnown RBP15.28■□□□□ 0.04
CUL9-202ENST00000372647 CHIC1Q5VXU3 224 aa15.28■□□□□ 0.04
CUL9-202ENST00000372647 CENPBP07199 599 aaPredicted RBP15.26■□□□□ 0.03
CUL9-202ENST00000372647 YTHDC1Q96MU7 727 aaKnown RBP15.24■□□□□ 0.03
CUL9-202ENST00000372647 ABCC9O60706 1549 aa14.95□□□□□ -0.02
CUL9-202ENST00000372647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.94□□□□□ -0.02
CUL9-202ENST00000372647 HNRNPUL2Q1KMD3 747 aaKnown RBP14.89□□□□□ -0.03
CUL9-202ENST00000372647 ITGAEP38570 1179 aa14.88□□□□□ -0.03
CUL9-202ENST00000372647 MYT1LQ9UL68 1186 aa14.88□□□□□ -0.03
CUL9-202ENST00000372647 ERICH6Q7L0X2 663 aa14.87□□□□□ -0.03
CUL9-202ENST00000372647 PABPN1Q86U42 306 aaKnown RBP eCLIP14.82□□□□□ -0.041e-7■■■□□ 15.6
CUL9-202ENST00000372647 DIEXFQ68CQ4 756 aaKnown RBP14.77□□□□□ -0.05
CUL9-202ENST00000372647 NEFLP07196 543 aa14.76□□□□□ -0.05
CUL9-202ENST00000372647 SCRIBQ14160 1630 aa14.72□□□□□ -0.05
CUL9-202ENST00000372647 CCDC180Q9P1Z9 1646 aa14.65□□□□□ -0.06
CUL9-202ENST00000372647 ZCCHC6Q5VYS8 1495 aaKnown RBP14.65□□□□□ -0.06
CUL9-202ENST00000372647 MYO15BQ96JP2 1530 aa14.63□□□□□ -0.07
CUL9-202ENST00000372647 CNGB1Q14028 1251 aaPredicted RBP14.58□□□□□ -0.07
CUL9-202ENST00000372647 MYT1Q01538 1121 aa14.57□□□□□ -0.08
CUL9-202ENST00000372647 POLR3GLQ9BT43 218 aa14.56□□□□□ -0.08
CUL9-202ENST00000372647 GTF3C3Q9Y5Q9 886 aa14.56□□□□□ -0.08
CUL9-202ENST00000372647 DCAF1Q9Y4B6 1507 aa14.48□□□□□ -0.09
CUL9-202ENST00000372647 FAM50AQ14320 339 aaKnown RBP14.48□□□□□ -0.09
CUL9-202ENST00000372647 FBLN2P98095 1184 aa14.47□□□□□ -0.09
CUL9-202ENST00000372647 NEUROD1Q13562 356 aa14.45□□□□□ -0.1
CUL9-202ENST00000372647 BCANQ96GW7 911 aa14.39□□□□□ -0.11
CUL9-202ENST00000372647 ZNF316A6NFI3 1004 aaPredicted RBP14.38□□□□□ -0.11
CUL9-202ENST00000372647 ACIN1Q9UKV3 1341 aaKnown RBP14.35□□□□□ -0.11
CUL9-202ENST00000372647 SLC4A1APQ9BWU0 796 aaKnown RBP14.3□□□□□ -0.12
CUL9-202ENST00000372647 TRIM52Q96A61 297 aa14.26□□□□□ -0.13
CUL9-202ENST00000372647 CSRNP3Q8WYN3 585 aa14.26□□□□□ -0.13
CUL9-202ENST00000372647 P3H3Q8IVL6 736 aa14.24□□□□□ -0.13
CUL9-202ENST00000372647 SCAF1Q9H7N4 1312 aaKnown RBP14.19□□□□□ -0.14
CUL9-202ENST00000372647 DAXXQ9UER7 740 aaPredicted RBP14.19□□□□□ -0.14
CUL9-202ENST00000372647 ANP32CO43423 234 aa14.18□□□□□ -0.14
CUL9-202ENST00000372647 ZNF326Q5BKZ1 582 aaKnown RBP14.12□□□□□ -0.15
CUL9-202ENST00000372647 ARID3CA6NKF2 412 aa14.12□□□□□ -0.15
CUL9-202ENST00000372647 RSF1Q96T23 1441 aaPredicted RBP14.09□□□□□ -0.15
CUL9-202ENST00000372647 RB1CC1Q8TDY2 1594 aa14.03□□□□□ -0.16
CUL9-202ENST00000372647 CDK11AQ9UQ88 783 aaPredicted RBP14.03□□□□□ -0.16
CUL9-202ENST00000372647 MIER1Q8N108 512 aa14.02□□□□□ -0.16
CUL9-202ENST00000372647 PLPPR3Q6T4P5 718 aa14.02□□□□□ -0.16
CUL9-202ENST00000372647 FKBP8Q14318 412 aa14□□□□□ -0.17
CUL9-202ENST00000372647 RTL5Q5HYW3 569 aaPredicted RBP13.99□□□□□ -0.17
CUL9-202ENST00000372647 DDX10Q13206 875 aaKnown RBP13.99□□□□□ -0.17
CUL9-202ENST00000372647 CLSPNQ9HAW4 1339 aa13.98□□□□□ -0.17
CUL9-202ENST00000372647 CEP162Q5TB80 1403 aa13.97□□□□□ -0.17
CUL9-202ENST00000372647 NPM1P06748 294 aaKnown RBP eCLIP13.96□□□□□ -0.18
CUL9-202ENST00000372647 ESF1Q9H501 851 aaKnown RBP13.95□□□□□ -0.18
CUL9-202ENST00000372647 HIRIP3Q9BW71 556 aaPredicted RBP13.94□□□□□ -0.18
CUL9-202ENST00000372647 ZNF777Q9ULD5 760 aaPredicted RBP13.92□□□□□ -0.18
CUL9-202ENST00000372647 CLIP1P30622 1438 aa13.92□□□□□ -0.18
CUL9-202ENST00000372647 NACADO15069 1562 aa13.89□□□□□ -0.19
CUL9-202ENST00000372647 TONSLQ96HA7 1378 aa13.89□□□□□ -0.19
CUL9-202ENST00000372647 WIZO95785 1651 aa13.88□□□□□ -0.19
CUL9-202ENST00000372647 GOLGA3Q08378 1498 aa13.88□□□□□ -0.19
CUL9-202ENST00000372647 ABCC8Q09428 1581 aa13.86□□□□□ -0.19
CUL9-202ENST00000372647 HNRNPUQ00839 825 aaKnown RBP eCLIP13.86□□□□□ -0.19
CUL9-202ENST00000372647 CECR2Q9BXF3 1484 aa13.85□□□□□ -0.19
CUL9-202ENST00000372647 SLC24A1O60721 1099 aa13.85□□□□□ -0.19
CUL9-202ENST00000372647 FAM9BQ8IZU0 186 aa13.84□□□□□ -0.19
CUL9-202ENST00000372647 CHIC2Q9UKJ5 165 aa13.84□□□□□ -0.19
CUL9-202ENST00000372647 NPM2Q86SE8 214 aaKnown RBP13.81□□□□□ -0.2
CUL9-202ENST00000372647 IRX6P78412 446 aaPredicted RBP13.81□□□□□ -0.2
CUL9-202ENST00000372647 STAG3Q9UJ98 1225 aa13.81□□□□□ -0.2
CUL9-202ENST00000372647 CHMP7Q8WUX9 453 aaPredicted RBP13.78□□□□□ -0.2
CUL9-202ENST00000372647 SALL2Q9Y467 1007 aaPredicted RBP13.78□□□□□ -0.2
CUL9-202ENST00000372647 BCL11AQ9H165 835 aa13.77□□□□□ -0.21
CUL9-202ENST00000372647 WRNQ14191 1432 aaPredicted RBP eCLIP13.77□□□□□ -0.21
CUL9-202ENST00000372647 BAZ1AQ9NRL2 1556 aaPredicted RBP13.76□□□□□ -0.21
CUL9-202ENST00000372647 MROH2BQ7Z745 1585 aa13.76□□□□□ -0.21
CUL9-202ENST00000372647 CHGAP10645 457 aaKnown RBP13.75□□□□□ -0.21
CUL9-202ENST00000372647 SOGA1O94964 1423 aa13.75□□□□□ -0.21
CUL9-202ENST00000372647 ANP32AP39687 249 aaKnown RBP13.74□□□□□ -0.21
CUL9-202ENST00000372647 TNIKQ9UKE5 1360 aa13.74□□□□□ -0.21
CUL9-202ENST00000372647 BAZ1BQ9UIG0 1483 aaKnown RBP13.73□□□□□ -0.21
CUL9-202ENST00000372647 CANXP27824 592 aaKnown RBP13.72□□□□□ -0.21
CUL9-202ENST00000372647 EEA1Q15075 1411 aa13.72□□□□□ -0.21
CUL9-202ENST00000372647 CEP164Q9UPV0 1460 aa13.71□□□□□ -0.21
CUL9-202ENST00000372647 ERCC6Q03468 1493 aa13.69□□□□□ -0.22
CUL9-202ENST00000372647 MTUS2Q5JR59 1369 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms