RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 RRP7BPQ9NSQ0 103 aa25.01■■□□□ 1.59
PRDM1-202ENST00000369091 FOXD1Q16676 465 aa25■■□□□ 1.59
PRDM1-202ENST00000369091 NBPF8Q3BBV2 869 aa24.99■■□□□ 1.59
PRDM1-202ENST00000369091 FYCO1Q9BQS8 1478 aa24.99■■□□□ 1.59
PRDM1-202ENST00000369091 RRP1P56182 461 aaKnown RBP24.98■■□□□ 1.59
PRDM1-202ENST00000369091 POLR3GLQ9BT43 218 aa24.96■■□□□ 1.59
PRDM1-202ENST00000369091 CHIC2Q9UKJ5 165 aa24.96■■□□□ 1.59
PRDM1-202ENST00000369091 DHX29Q7Z478 1369 aaKnown RBP24.94■■□□□ 1.58
PRDM1-202ENST00000369091 CASKIN1Q8WXD9 1431 aa24.94■■□□□ 1.58
PRDM1-202ENST00000369091 MS4A1P11836 297 aa24.93■■□□□ 1.58
PRDM1-202ENST00000369091 MTUS2Q5JR59 1369 aa24.92■■□□□ 1.58
PRDM1-202ENST00000369091 PKNOX2Q96KN3 472 aa24.91■■□□□ 1.58
PRDM1-202ENST00000369091 RSPH6AQ9H0K4 717 aa24.91■■□□□ 1.58
PRDM1-202ENST00000369091 DDRGK1Q96HY6 314 aa24.9■■□□□ 1.58
PRDM1-202ENST00000369091 ABCA5Q8WWZ7 1642 aa24.9■■□□□ 1.58
PRDM1-202ENST00000369091 FGD5Q6ZNL6 1462 aa24.89■■□□□ 1.58
PRDM1-202ENST00000369091 PNISRQ8TF01 805 aaKnown RBP24.88■■□□□ 1.57
PRDM1-202ENST00000369091 SPATA31E1Q6ZUB1 1445 aa24.88■■□□□ 1.57
PRDM1-202ENST00000369091 DCAF11Q8TEB1 546 aa24.88■■□□□ 1.57
PRDM1-202ENST00000369091 KDM6BO15054 1643 aa24.86■■□□□ 1.57
PRDM1-202ENST00000369091 HECW1Q76N89 1606 aa24.86■■□□□ 1.57
PRDM1-202ENST00000369091 MPHOSPH9Q99550 1183 aa24.85■■□□□ 1.57
PRDM1-202ENST00000369091 FAM43AQ8N2R8 423 aa24.84■■□□□ 1.57
PRDM1-202ENST00000369091 RCAN3Q9UKA8 241 aa24.84■■□□□ 1.57
PRDM1-202ENST00000369091 MYOM3Q5VTT5 1437 aa24.83■■□□□ 1.57
PRDM1-202ENST00000369091 TMC1Q8TDI8 760 aa24.82■■□□□ 1.56
PRDM1-202ENST00000369091 POLR1AO95602 1720 aaPredicted RBP24.81■■□□□ 1.56
PRDM1-202ENST00000369091 FRAT2O75474 233 aaPredicted RBP24.81■■□□□ 1.56
PRDM1-202ENST00000369091 DAXXQ9UER7 740 aaPredicted RBP24.78■■□□□ 1.56
PRDM1-202ENST00000369091 PLIN1O60240 522 aa24.77■■□□□ 1.56
PRDM1-202ENST00000369091 TEX14Q8IWB6 1497 aa24.75■■□□□ 1.55
PRDM1-202ENST00000369091 HMGXB3Q12766 1538 aa24.74■■□□□ 1.55
PRDM1-202ENST00000369091 SNAPC4Q5SXM2 1469 aa24.74■■□□□ 1.55
PRDM1-202ENST00000369091 CFTRP13569 1480 aa24.73■■□□□ 1.55
PRDM1-202ENST00000369091 GCC2Q8IWJ2 1684 aa24.72■■□□□ 1.55
PRDM1-202ENST00000369091 EFCAB5A4FU69 1503 aa24.71■■□□□ 1.55
PRDM1-202ENST00000369091 BCORL1Q5H9F3 1711 aa24.71■■□□□ 1.55
PRDM1-202ENST00000369091 RPRD2Q5VT52 1461 aaKnown RBP24.7■■□□□ 1.54
PRDM1-202ENST00000369091 LRPPRCP42704 1394 aaKnown RBP24.69■■□□□ 1.54
PRDM1-202ENST00000369091 CRBNQ96SW2 442 aa24.69■■□□□ 1.54
PRDM1-202ENST00000369091 RRAGDQ9NQL2 400 aaPredicted RBP24.69■■□□□ 1.54
PRDM1-202ENST00000369091 LRRIQ1Q96JM4 1722 aa24.68■■□□□ 1.54
PRDM1-202ENST00000369091 ANKRD30BQ9BXX2 1392 aa24.68■■□□□ 1.54
PRDM1-202ENST00000369091 CDCA7LQ96GN5 454 aa24.67■■□□□ 1.54
PRDM1-202ENST00000369091 ZNF326Q5BKZ1 582 aaKnown RBP24.66■■□□□ 1.54
PRDM1-202ENST00000369091 USP47Q96K76 1375 aa24.64■■□□□ 1.54
PRDM1-202ENST00000369091 MIA2Q96PC5 1412 aa24.64■■□□□ 1.53
PRDM1-202ENST00000369091 SUPT6HQ7KZ85 1726 aaKnown RBP24.63■■□□□ 1.53
PRDM1-202ENST00000369091 VSIG10Q8N0Z9 540 aa24.61■■□□□ 1.53
PRDM1-202ENST00000369091 POGKQ9P215 609 aa24.61■■□□□ 1.53
PRDM1-202ENST00000369091 UGGT2Q9NYU1 1516 aa24.58■■□□□ 1.53
PRDM1-202ENST00000369091 ZMYND15Q9H091 742 aa24.58■■□□□ 1.53
PRDM1-202ENST00000369091 C8orf34Q49A92 452 aa24.58■■□□□ 1.52
PRDM1-202ENST00000369091 C20orf194Q5TEA3 1177 aa24.58■■□□□ 1.52
PRDM1-202ENST00000369091 MYBBP1AQ9BQG0 1328 aaKnown RBP24.56■■□□□ 1.52
PRDM1-202ENST00000369091 NESP48681 1621 aa24.56■■□□□ 1.52
PRDM1-202ENST00000369091 EHBP1L1Q8N3D4 1523 aa24.56■■□□□ 1.52
PRDM1-202ENST00000369091 BRD4O60885 1362 aaPredicted RBP24.56■■□□□ 1.52
PRDM1-202ENST00000369091 GLIPR1L2Q4G1C9 344 aa24.55■■□□□ 1.52
PRDM1-202ENST00000369091 MAGI3Q5TCQ9 1506 aa24.55■■□□□ 1.52
PRDM1-202ENST00000369091 KIF15Q9NS87 1388 aa24.55■■□□□ 1.52
PRDM1-202ENST00000369091 FAM161AQ3B820 660 aa24.54■■□□□ 1.52
PRDM1-202ENST00000369091 TCOF1Q13428 1488 aaKnown RBP24.54■■□□□ 1.52
PRDM1-202ENST00000369091 KDM2BQ8NHM5 1336 aa24.53■■□□□ 1.52
PRDM1-202ENST00000369091 SLC4A1APQ9BWU0 796 aaKnown RBP24.52■■□□□ 1.52
PRDM1-202ENST00000369091 GRIN2BQ13224 1484 aa24.52■■□□□ 1.52
PRDM1-202ENST00000369091 ARXQ96QS3 562 aa24.51■■□□□ 1.51
PRDM1-202ENST00000369091 KTN1Q86UP2 1357 aaKnown RBP24.5■■□□□ 1.51
PRDM1-202ENST00000369091 PDE3BQ13370 1112 aa24.5■■□□□ 1.51
PRDM1-202ENST00000369091 ARHGEF11O15085 1522 aa24.5■■□□□ 1.51
PRDM1-202ENST00000369091 NAP1L5Q96NT1 182 aaPredicted RBP24.49■■□□□ 1.51
PRDM1-202ENST00000369091 CTTNBP2Q8WZ74 1663 aa24.49■■□□□ 1.51
PRDM1-202ENST00000369091 RGS3P49796 1198 aa24.47■■□□□ 1.51
PRDM1-202ENST00000369091 KDM5CP41229 1560 aa24.47■■□□□ 1.51
PRDM1-202ENST00000369091 RALBP1Q15311 655 aa24.45■■□□□ 1.5
PRDM1-202ENST00000369091 MBD5Q9P267 1494 aa24.44■■□□□ 1.5
PRDM1-202ENST00000369091 ROCK2O75116 1388 aaKnown RBP24.44■■□□□ 1.5
PRDM1-202ENST00000369091 ARID4BQ4LE39 1312 aaPredicted RBP24.44■■□□□ 1.5
PRDM1-202ENST00000369091 CENPQQ7L2Z9 268 aaPredicted RBP24.43■■□□□ 1.5
PRDM1-202ENST00000369091 RAD54L2Q9Y4B4 1467 aa24.42■■□□□ 1.5
PRDM1-202ENST00000369091 HSP90AA2PQ14568 343 aaPredicted RBP24.4■■□□□ 1.5
PRDM1-202ENST00000369091 PRDM2Q13029 1718 aa24.38■■□□□ 1.49
PRDM1-202ENST00000369091 SLKQ9H2G2 1235 aaPredicted RBP24.38■■□□□ 1.49
PRDM1-202ENST00000369091 NLRP13Q86W25 1043 aa24.38■■□□□ 1.49
PRDM1-202ENST00000369091 THOC2Q8NI27 1593 aaKnown RBP24.37■■□□□ 1.49
PRDM1-202ENST00000369091 L1TD1Q5T7N2 865 aaKnown RBP24.37■■□□□ 1.49
PRDM1-202ENST00000369091 KIF14Q15058 1648 aa24.36■■□□□ 1.49
PRDM1-202ENST00000369091 ARID3CA6NKF2 412 aa24.36■■□□□ 1.49
PRDM1-202ENST00000369091 PNNQ9H307 717 aaKnown RBP24.36■■□□□ 1.49
PRDM1-202ENST00000369091 SAMD9Q5K651 1589 aa24.36■■□□□ 1.49
PRDM1-202ENST00000369091 CARD11Q9BXL7 1154 aa24.35■■□□□ 1.49
PRDM1-202ENST00000369091 ST20-MTHFSA0A0A6YYL1 179 aa24.35■■□□□ 1.49
PRDM1-202ENST00000369091 HSP90AA1P07900 732 aaKnown RBP24.35■■□□□ 1.49
PRDM1-202ENST00000369091 PANK2Q9BZ23 570 aa24.32■■□□□ 1.48
PRDM1-202ENST00000369091 USP19O94966 1318 aa24.31■■□□□ 1.48
PRDM1-202ENST00000369091 CADPSQ9ULU8 1353 aa24.31■■□□□ 1.48
PRDM1-202ENST00000369091 DAPK1P53355 1430 aa24.31■■□□□ 1.48
PRDM1-202ENST00000369091 PZPP20742 1482 aa24.31■■□□□ 1.48
PRDM1-202ENST00000369091 XRCC6P12956 609 aaKnown RBP eCLIP24.31■■□□□ 1.48
PRDM1-202ENST00000369091 RRP9O43818 475 aaKnown RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 1185.4 ms