RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 CCDC18Q5T9S5 1454 aa17.38■□□□□ 0.37
NCSTN-202ENST00000368063 SLC4A3P48751 1232 aa17.37■□□□□ 0.37
NCSTN-202ENST00000368063 EXOC6Q8TAG9 804 aa17.37■□□□□ 0.37
NCSTN-202ENST00000368063 EIF4G2P78344 907 aaKnown RBP eCLIP17.36■□□□□ 0.37
NCSTN-202ENST00000368063 CFAP43Q8NDM7 1665 aa17.36■□□□□ 0.37
NCSTN-202ENST00000368063 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.35■□□□□ 0.37
NCSTN-202ENST00000368063 HSP90AA1P07900 732 aaKnown RBP17.35■□□□□ 0.37
NCSTN-202ENST00000368063 RRP1P56182 461 aaKnown RBP17.34■□□□□ 0.37
NCSTN-202ENST00000368063 POLR1AO95602 1720 aaPredicted RBP17.32■□□□□ 0.36
NCSTN-202ENST00000368063 TOPBP1Q92547 1522 aa17.32■□□□□ 0.36
NCSTN-202ENST00000368063 NAP1L5Q96NT1 182 aaPredicted RBP17.32■□□□□ 0.36
NCSTN-202ENST00000368063 IGF1RP08069 1367 aa17.32■□□□□ 0.36
NCSTN-202ENST00000368063 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
NCSTN-202ENST00000368063 PTPN23Q9H3S7 1636 aa17.3■□□□□ 0.36
NCSTN-202ENST00000368063 HFM1A2PYH4 1435 aa17.28■□□□□ 0.36
NCSTN-202ENST00000368063 PDS5BQ9NTI5 1447 aa17.28■□□□□ 0.36
NCSTN-202ENST00000368063 CLCN1P35523 988 aa17.28■□□□□ 0.36
NCSTN-202ENST00000368063 PNNQ9H307 717 aaKnown RBP17.28■□□□□ 0.36
NCSTN-202ENST00000368063 AQRO60306 1485 aaKnown RBP eCLIP17.27■□□□□ 0.361e-6■■■■□ 26
NCSTN-202ENST00000368063 NESP48681 1621 aa17.27■□□□□ 0.36
NCSTN-202ENST00000368063 POGKQ9P215 609 aa17.25■□□□□ 0.35
NCSTN-202ENST00000368063 CARMIL1Q5VZK9 1371 aa17.25■□□□□ 0.35
NCSTN-202ENST00000368063 POLA1P09884 1462 aaPredicted RBP17.25■□□□□ 0.35
NCSTN-202ENST00000368063 L1TD1Q5T7N2 865 aaKnown RBP17.24■□□□□ 0.35
NCSTN-202ENST00000368063 DHX29Q7Z478 1369 aaKnown RBP17.24■□□□□ 0.35
NCSTN-202ENST00000368063 SKAP1Q86WV1 359 aa17.24■□□□□ 0.35
NCSTN-202ENST00000368063 CUL7Q14999 1698 aa17.24■□□□□ 0.35
NCSTN-202ENST00000368063 KIF7Q2M1P5 1343 aa17.23■□□□□ 0.35
NCSTN-202ENST00000368063 RBM10P98175 930 aaKnown RBP17.22■□□□□ 0.35
NCSTN-202ENST00000368063 PTPRKQ15262 1439 aa17.2■□□□□ 0.34
NCSTN-202ENST00000368063 URB2Q14146 1524 aaKnown RBP17.2■□□□□ 0.34
NCSTN-202ENST00000368063 CENPJQ9HC77 1338 aaPredicted RBP17.2■□□□□ 0.34
NCSTN-202ENST00000368063 AAMPQ13685 434 aa17.19■□□□□ 0.34
NCSTN-202ENST00000368063 PCF11O94913 1555 aaKnown RBP17.19■□□□□ 0.34
NCSTN-202ENST00000368063 NAIPQ13075 1403 aa17.19■□□□□ 0.34
NCSTN-202ENST00000368063 SENP3-EIF4A1A0A087X0R7 540 aa17.19■□□□□ 0.34
NCSTN-202ENST00000368063 PNISRQ8TF01 805 aaKnown RBP17.19■□□□□ 0.34
NCSTN-202ENST00000368063 RCAN3Q9UKA8 241 aa17.19■□□□□ 0.34
NCSTN-202ENST00000368063 SPATA31E1Q6ZUB1 1445 aa17.19■□□□□ 0.34
NCSTN-202ENST00000368063 DENND4BO75064 1496 aaPredicted RBP17.17■□□□□ 0.34
NCSTN-202ENST00000368063 PRDM4Q9UKN5 801 aa17.17■□□□□ 0.34
NCSTN-202ENST00000368063 FGD6Q6ZV73 1430 aa17.16■□□□□ 0.34
NCSTN-202ENST00000368063 A0A0U1RQG5 324 aaPredicted RBP17.16■□□□□ 0.34
NCSTN-202ENST00000368063 RAD54L2Q9Y4B4 1467 aa17.16■□□□□ 0.34
NCSTN-202ENST00000368063 C8orf34Q49A92 452 aa17.15■□□□□ 0.34
NCSTN-202ENST00000368063 LRPPRCP42704 1394 aaKnown RBP17.15■□□□□ 0.34
NCSTN-202ENST00000368063 CALD1Q05682 793 aaKnown RBP17.15■□□□□ 0.34
NCSTN-202ENST00000368063 KIF21AQ7Z4S6 1674 aa17.14■□□□□ 0.33
NCSTN-202ENST00000368063 HECW1Q76N89 1606 aa17.14■□□□□ 0.33
NCSTN-202ENST00000368063 FMN1Q68DA7 1419 aa17.14■□□□□ 0.33
NCSTN-202ENST00000368063 XRCC6P12956 609 aaKnown RBP eCLIP17.13■□□□□ 0.33
NCSTN-202ENST00000368063 FAM161AQ3B820 660 aa17.13■□□□□ 0.33
NCSTN-202ENST00000368063 FGD1P98174 961 aa17.12■□□□□ 0.33
NCSTN-202ENST00000368063 MYOM3Q5VTT5 1437 aa17.12■□□□□ 0.33
NCSTN-202ENST00000368063 KDM2BQ8NHM5 1336 aa17.11■□□□□ 0.33
NCSTN-202ENST00000368063 PDCL3Q9H2J4 239 aa17.11■□□□□ 0.33
NCSTN-202ENST00000368063 FSD2A1L4K1 749 aa17.1■□□□□ 0.33
NCSTN-202ENST00000368063 KTN1Q86UP2 1357 aaKnown RBP17.1■□□□□ 0.33
NCSTN-202ENST00000368063 CTTNBP2Q8WZ74 1663 aa17.1■□□□□ 0.33
NCSTN-202ENST00000368063 EFCAB5A4FU69 1503 aa17.09■□□□□ 0.33
NCSTN-202ENST00000368063 L3MBTL2Q969R5 705 aa17.09■□□□□ 0.33
NCSTN-202ENST00000368063 CRBNQ96SW2 442 aa17.07■□□□□ 0.32
NCSTN-202ENST00000368063 PANK2Q9BZ23 570 aa17.07■□□□□ 0.32
NCSTN-202ENST00000368063 NBPF8Q3BBV2 869 aa17.06■□□□□ 0.32
NCSTN-202ENST00000368063 TPM2P07951 284 aa17.06■□□□□ 0.32
NCSTN-202ENST00000368063 GOLGA6L3A6NEY3 463 aa17.05■□□□□ 0.32
NCSTN-202ENST00000368063 TMC1Q8TDI8 760 aa17.05■□□□□ 0.32
NCSTN-202ENST00000368063 TARBP1Q13395 1621 aaKnown RBP17.04■□□□□ 0.32
NCSTN-202ENST00000368063 GAPVD1Q14C86 1478 aa17.04■□□□□ 0.32
NCSTN-202ENST00000368063 FYCO1Q9BQS8 1478 aa17.04■□□□□ 0.32
NCSTN-202ENST00000368063 VIRMAQ69YN4 1812 aaKnown RBP17.03■□□□□ 0.32
NCSTN-202ENST00000368063 MIA2Q96PC5 1412 aa17.03■□□□□ 0.32
NCSTN-202ENST00000368063 TEX14Q8IWB6 1497 aa17.03■□□□□ 0.32
NCSTN-202ENST00000368063 BCORL1Q5H9F3 1711 aa17.03■□□□□ 0.32
NCSTN-202ENST00000368063 PLIN1O60240 522 aa17.03■□□□□ 0.32
NCSTN-202ENST00000368063 PDE3BQ13370 1112 aa17.03■□□□□ 0.32
NCSTN-202ENST00000368063 CNGB1Q14028 1251 aaPredicted RBP17.03■□□□□ 0.32
NCSTN-202ENST00000368063 MRC2Q9UBG0 1479 aa17.02■□□□□ 0.32
NCSTN-202ENST00000368063 GCC2Q8IWJ2 1684 aa17.02■□□□□ 0.31
NCSTN-202ENST00000368063 ERBB4Q15303 1308 aa17.01■□□□□ 0.31
NCSTN-202ENST00000368063 RGS3P49796 1198 aa17.01■□□□□ 0.31
NCSTN-202ENST00000368063 CENPQQ7L2Z9 268 aaPredicted RBP17.01■□□□□ 0.31
NCSTN-202ENST00000368063 BRD4O60885 1362 aaPredicted RBP17■□□□□ 0.31
NCSTN-202ENST00000368063 ESPNB1AK53 854 aa17■□□□□ 0.31
NCSTN-202ENST00000368063 USP19O94966 1318 aa17■□□□□ 0.31
NCSTN-202ENST00000368063 ARXQ96QS3 562 aa16.99■□□□□ 0.31
NCSTN-202ENST00000368063 ANTXR1Q9H6X2 564 aa16.99■□□□□ 0.31
NCSTN-202ENST00000368063 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
NCSTN-202ENST00000368063 RPRD2Q5VT52 1461 aaKnown RBP16.97■□□□□ 0.31
NCSTN-202ENST00000368063 CASKIN1Q8WXD9 1431 aa16.97■□□□□ 0.31
NCSTN-202ENST00000368063 ARID4BQ4LE39 1312 aaPredicted RBP16.96■□□□□ 0.31
NCSTN-202ENST00000368063 PDE4CQ08493 712 aa16.96■□□□□ 0.3
NCSTN-202ENST00000368063 PBRM1Q86U86 1689 aa16.95■□□□□ 0.3
NCSTN-202ENST00000368063 KDM6BO15054 1643 aa16.95■□□□□ 0.3
NCSTN-202ENST00000368063 CDCA7LQ96GN5 454 aa16.95■□□□□ 0.3
NCSTN-202ENST00000368063 SLKQ9H2G2 1235 aaPredicted RBP16.94■□□□□ 0.3
NCSTN-202ENST00000368063 TDRD9Q8NDG6 1382 aaKnown RBP16.94■□□□□ 0.3
NCSTN-202ENST00000368063 MRE11P49959 708 aa16.94■□□□□ 0.3
NCSTN-202ENST00000368063 C20orf194Q5TEA3 1177 aa16.93■□□□□ 0.3
NCSTN-202ENST00000368063 MYBBP1AQ9BQG0 1328 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms