RNA–Protein interactions for RNA: ENST00000367094.6

TULP4-201, Transcript of tubby like protein 4, humanhuman

TSL 1 (best) BASIC

Gene TULP4, Length 5,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-201ENST00000367094 NCAPD3P42695 1498 aa13.11□□□□□ -0.31
TULP4-201ENST00000367094 KIF21BO75037 1637 aa13.11□□□□□ -0.31
TULP4-201ENST00000367094 CFAP44Q96MT7 982 aa13.11□□□□□ -0.31
TULP4-201ENST00000367094 RUSC2Q8N2Y8 1516 aa13.1□□□□□ -0.31
TULP4-201ENST00000367094 CUX1P39880 1505 aa13.1□□□□□ -0.31
TULP4-201ENST00000367094 C14orf37Q86TY3 774 aa13.09□□□□□ -0.31
TULP4-201ENST00000367094 ERICH3Q5RHP9 1530 aa13.09□□□□□ -0.31
TULP4-201ENST00000367094 PHLDB1Q86UU1 1377 aa13.08□□□□□ -0.31
TULP4-201ENST00000367094 L1TD1Q5T7N2 865 aaKnown RBP13.08□□□□□ -0.32
TULP4-201ENST00000367094 MORC1Q86VD1 984 aa13.08□□□□□ -0.32
TULP4-201ENST00000367094 NOP58Q9Y2X3 529 aaKnown RBP13.08□□□□□ -0.32
TULP4-201ENST00000367094 FGD5Q6ZNL6 1462 aa13.07□□□□□ -0.32
TULP4-201ENST00000367094 DNTTIP2Q5QJE6 756 aaKnown RBP13.05□□□□□ -0.32
TULP4-201ENST00000367094 PDE3BQ13370 1112 aa13.05□□□□□ -0.32
TULP4-201ENST00000367094 NEUROD2Q15784 382 aa13.05□□□□□ -0.32
TULP4-201ENST00000367094 CALD1Q05682 793 aaKnown RBP13.04□□□□□ -0.32
TULP4-201ENST00000367094 IGF1RP08069 1367 aa13.04□□□□□ -0.32
TULP4-201ENST00000367094 HDGFL2Q7Z4V5 671 aaPredicted RBP13.04□□□□□ -0.32
TULP4-201ENST00000367094 L3MBTL2Q969R5 705 aa13.04□□□□□ -0.32
TULP4-201ENST00000367094 U2SURPO15042 1029 aaKnown RBP13.03□□□□□ -0.32
TULP4-201ENST00000367094 FRAT1Q92837 279 aaPredicted RBP13.03□□□□□ -0.32
TULP4-201ENST00000367094 GAPVD1Q14C86 1478 aa13.03□□□□□ -0.32
TULP4-201ENST00000367094 UACAQ9BZF9 1416 aa13.03□□□□□ -0.32
TULP4-201ENST00000367094 SRPK2P78362 688 aaKnown RBP13.02□□□□□ -0.32
TULP4-201ENST00000367094 JPH4Q96JJ6 628 aa13.02□□□□□ -0.33
TULP4-201ENST00000367094 ZBTB7CA1YPR0 619 aa13.02□□□□□ -0.33
TULP4-201ENST00000367094 B4GALNT3Q6L9W6 998 aa13.02□□□□□ -0.33
TULP4-201ENST00000367094 ARXQ96QS3 562 aa13.02□□□□□ -0.33
TULP4-201ENST00000367094 KIF15Q9NS87 1388 aa13.01□□□□□ -0.33
TULP4-201ENST00000367094 FOXD1Q16676 465 aa13.01□□□□□ -0.33
TULP4-201ENST00000367094 LAS1LQ9Y4W2 734 aaKnown RBP13.01□□□□□ -0.33
TULP4-201ENST00000367094 IPO8O15397 1037 aaKnown RBP13.01□□□□□ -0.33
TULP4-201ENST00000367094 NLRP13Q86W25 1043 aa13□□□□□ -0.33
TULP4-201ENST00000367094 SPAG9O60271 1321 aaKnown RBP13□□□□□ -0.33
TULP4-201ENST00000367094 RGS3P49796 1198 aa13□□□□□ -0.33
TULP4-201ENST00000367094 RCAN3Q9UKA8 241 aa13□□□□□ -0.33
TULP4-201ENST00000367094 MYOM3Q5VTT5 1437 aa13□□□□□ -0.33
TULP4-201ENST00000367094 TCERG1O14776 1098 aaKnown RBP12.99□□□□□ -0.33
TULP4-201ENST00000367094 CHAF1AQ13111 956 aaPredicted RBP12.99□□□□□ -0.33
TULP4-201ENST00000367094 CCDC144AA2RUR9 1427 aa12.98□□□□□ -0.33
TULP4-201ENST00000367094 CASKIN1Q8WXD9 1431 aa12.98□□□□□ -0.33
TULP4-201ENST00000367094 FGD6Q6ZV73 1430 aa12.98□□□□□ -0.33
TULP4-201ENST00000367094 CHMP4AQ9BY43 222 aa12.97□□□□□ -0.33
TULP4-201ENST00000367094 GGT6Q6P531 493 aa12.97□□□□□ -0.33
TULP4-201ENST00000367094 LRRC9Q6ZRR7 1453 aa12.96□□□□□ -0.33
TULP4-201ENST00000367094 HNRNPMP52272 730 aaKnown RBP eCLIP12.96□□□□□ -0.333e-7■■■■□ 20.3
TULP4-201ENST00000367094 FYCO1Q9BQS8 1478 aa12.96□□□□□ -0.33
TULP4-201ENST00000367094 HMGXB3Q12766 1538 aa12.96□□□□□ -0.33
TULP4-201ENST00000367094 EFCAB5A4FU69 1503 aa12.96□□□□□ -0.34
TULP4-201ENST00000367094 SENP3Q9H4L4 574 aaPredicted RBP12.95□□□□□ -0.34
TULP4-201ENST00000367094 PTPRGP23470 1445 aa12.95□□□□□ -0.34
TULP4-201ENST00000367094 MYBBP1AQ9BQG0 1328 aaKnown RBP12.95□□□□□ -0.34
TULP4-201ENST00000367094 CFTRP13569 1480 aa12.95□□□□□ -0.34
TULP4-201ENST00000367094 HSCBQ8IWL3 235 aa12.94□□□□□ -0.34
TULP4-201ENST00000367094 HSP90AB1P08238 724 aaKnown RBP12.94□□□□□ -0.34
TULP4-201ENST00000367094 STAC3Q96MF2 364 aa12.94□□□□□ -0.34
TULP4-201ENST00000367094 KIF3BO15066 747 aa12.93□□□□□ -0.34
TULP4-201ENST00000367094 TERF2IPQ9NYB0 399 aa12.93□□□□□ -0.34
TULP4-201ENST00000367094 PTMSP20962 102 aa12.93□□□□□ -0.34
TULP4-201ENST00000367094 RWDD1Q9H446 243 aaPredicted RBP12.93□□□□□ -0.34
TULP4-201ENST00000367094 RBM19Q9Y4C8 960 aaKnown RBP12.93□□□□□ -0.34
TULP4-201ENST00000367094 SENP3-EIF4A1A0A087X0R7 540 aa12.93□□□□□ -0.34
TULP4-201ENST00000367094 MCCP23508 829 aa12.92□□□□□ -0.34
TULP4-201ENST00000367094 PMFBP1Q8TBY8 1022 aa12.92□□□□□ -0.34
TULP4-201ENST00000367094 NAP1L5Q96NT1 182 aaPredicted RBP12.92□□□□□ -0.34
TULP4-201ENST00000367094 TOP2BQ02880 1626 aa12.92□□□□□ -0.34
TULP4-201ENST00000367094 GOLGA2Q08379 1002 aa12.91□□□□□ -0.34
TULP4-201ENST00000367094 RTF1Q92541 710 aaKnown RBP12.91□□□□□ -0.34
TULP4-201ENST00000367094 RRBP1Q9P2E9 1410 aaKnown RBP12.91□□□□□ -0.34
TULP4-201ENST00000367094 SYNJ1O43426 1573 aa12.9□□□□□ -0.34
TULP4-201ENST00000367094 NGEFQ8N5V2 710 aa12.9□□□□□ -0.35
TULP4-201ENST00000367094 RAD54L2Q9Y4B4 1467 aa12.89□□□□□ -0.35
TULP4-201ENST00000367094 OS9Q13438 667 aaPredicted RBP12.89□□□□□ -0.35
TULP4-201ENST00000367094 U2AF1L5P0DN76 240 aaPredicted RBP12.89□□□□□ -0.35
TULP4-201ENST00000367094 U2AF1Q01081 240 aaKnown RBP eCLIP12.89□□□□□ -0.35
TULP4-201ENST00000367094 USP47Q96K76 1375 aa12.89□□□□□ -0.35
TULP4-201ENST00000367094 LMOD3Q0VAK6 560 aa12.88□□□□□ -0.35
TULP4-201ENST00000367094 ZBED9Q6R2W3 1325 aa12.88□□□□□ -0.35
TULP4-201ENST00000367094 GRIN2BQ13224 1484 aa12.87□□□□□ -0.35
TULP4-201ENST00000367094 PRXQ9BXM0 1461 aa12.87□□□□□ -0.35
TULP4-201ENST00000367094 MIA2Q96PC5 1412 aa12.87□□□□□ -0.35
TULP4-201ENST00000367094 WASHC2CQ9Y4E1 1318 aa12.87□□□□□ -0.35
TULP4-201ENST00000367094 USP35Q9P2H5 1018 aa12.87□□□□□ -0.35
TULP4-201ENST00000367094 PRKRIP1Q9H875 184 aaPredicted RBP12.86□□□□□ -0.35
TULP4-201ENST00000367094 NCOA2Q15596 1464 aa12.86□□□□□ -0.35
TULP4-201ENST00000367094 STK26Q9P289 416 aa12.86□□□□□ -0.35
TULP4-201ENST00000367094 GOLGA6L4A6NEF3 574 aa12.86□□□□□ -0.35
TULP4-201ENST00000367094 EHBP1L1Q8N3D4 1523 aa12.85□□□□□ -0.35
TULP4-201ENST00000367094 A0A0G2JS52 829 aa12.85□□□□□ -0.35
TULP4-201ENST00000367094 HDAC5Q9UQL6 1122 aa12.85□□□□□ -0.35
TULP4-201ENST00000367094 SAFB2Q14151 953 aaKnown RBP eCLIP12.84□□□□□ -0.35
TULP4-201ENST00000367094 MLECQ14165 292 aa12.84□□□□□ -0.35
TULP4-201ENST00000367094 LMOD2Q6P5Q4 547 aa12.84□□□□□ -0.35
TULP4-201ENST00000367094 ST20-MTHFSA0A0A6YYL1 179 aa12.84□□□□□ -0.35
TULP4-201ENST00000367094 CENPJQ9HC77 1338 aaPredicted RBP12.84□□□□□ -0.35
TULP4-201ENST00000367094 MSNP26038 577 aaKnown RBP12.83□□□□□ -0.35
TULP4-201ENST00000367094 FGD1P98174 961 aa12.83□□□□□ -0.36
TULP4-201ENST00000367094 KCNJ4P48050 445 aa12.82□□□□□ -0.36
TULP4-201ENST00000367094 VGFO15240 615 aaPredicted RBP12.82□□□□□ -0.36
TULP4-201ENST00000367094 ARAP1Q96P48 1450 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms