RNA–Protein interactions for RNA: ENST00000367094.6

TULP4-201, Transcript of tubby like protein 4, humanhuman

TSL 1 (best) BASIC

Gene TULP4, Length 5,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-201ENST00000367094 NISCHQ9Y2I1 1504 aa17.79■□□□□ 0.44
TULP4-201ENST00000367094 DCAF8L2P0C7V8 631 aa17.36■□□□□ 0.37
TULP4-201ENST00000367094 SUPT5HO00267 1087 aaKnown RBP16.69■□□□□ 0.26
TULP4-201ENST00000367094 SHROOM4Q9ULL8 1493 aa16.47■□□□□ 0.23
TULP4-201ENST00000367094 PELP1Q8IZL8 1130 aaKnown RBP16.43■□□□□ 0.22
TULP4-201ENST00000367094 APLP2Q06481 763 aa15.89■□□□□ 0.13
TULP4-201ENST00000367094 EHMT2Q96KQ7 1210 aa15.74■□□□□ 0.11
TULP4-201ENST00000367094 ZEB1P37275 1124 aaPredicted RBP15.68■□□□□ 0.1
TULP4-201ENST00000367094 CCER1Q8TC90 406 aaPredicted RBP15.65■□□□□ 0.1
TULP4-201ENST00000367094 FAM9AQ8IZU1 332 aaPredicted RBP15.65■□□□□ 0.1
TULP4-201ENST00000367094 TRIM41Q8WV44 630 aa15.65■□□□□ 0.1
TULP4-201ENST00000367094 PCGF6Q9BYE7 350 aa15.58■□□□□ 0.08
TULP4-201ENST00000367094 MYT1Q01538 1121 aa15.54■□□□□ 0.08
TULP4-201ENST00000367094 ERICH6Q7L0X2 663 aa15.51■□□□□ 0.07
TULP4-201ENST00000367094 CENPBP07199 599 aaPredicted RBP15.38■□□□□ 0.05
TULP4-201ENST00000367094 UBTFP17480 764 aaKnown RBP15.33■□□□□ 0.04
TULP4-201ENST00000367094 TTBK1Q5TCY1 1321 aaPredicted RBP15.27■□□□□ 0.03
TULP4-201ENST00000367094 TRIM26Q12899 539 aaPredicted RBP15.23■□□□□ 0.03
TULP4-201ENST00000367094 CHIC1Q5VXU3 224 aa15.16■□□□□ 0.02
TULP4-201ENST00000367094 RANGAP1P46060 587 aaPredicted RBP15.15■□□□□ 0.02
TULP4-201ENST00000367094 NEFLP07196 543 aa15.11■□□□□ 0.01
TULP4-201ENST00000367094 ATP1B4Q9UN42 357 aaPredicted RBP15.1■□□□□ 0.01
TULP4-201ENST00000367094 HRCP23327 699 aa15.04■□□□□ -0
TULP4-201ENST00000367094 YTHDC1Q96MU7 727 aaKnown RBP14.98□□□□□ -0.01
TULP4-201ENST00000367094 LOC105371045A0A1W2PR82 267 aa14.88□□□□□ -0.03
TULP4-201ENST00000367094 ABCC9O60706 1549 aa14.87□□□□□ -0.03
TULP4-201ENST00000367094 CCDC180Q9P1Z9 1646 aa14.85□□□□□ -0.03
TULP4-201ENST00000367094 PPARGC1BQ86YN6 1023 aaKnown RBP14.82□□□□□ -0.04
TULP4-201ENST00000367094 DAXXQ9UER7 740 aaPredicted RBP14.82□□□□□ -0.04
TULP4-201ENST00000367094 ZCCHC6Q5VYS8 1495 aaKnown RBP14.81□□□□□ -0.04
TULP4-201ENST00000367094 HNRNPUL2Q1KMD3 747 aaKnown RBP14.67□□□□□ -0.06
TULP4-201ENST00000367094 ITGAEP38570 1179 aa14.64□□□□□ -0.07
TULP4-201ENST00000367094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.63□□□□□ -0.07
TULP4-201ENST00000367094 PABPN1Q86U42 306 aaKnown RBP eCLIP14.6□□□□□ -0.07
TULP4-201ENST00000367094 SCRIBQ14160 1630 aa14.52□□□□□ -0.09
TULP4-201ENST00000367094 DIEXFQ68CQ4 756 aaKnown RBP14.52□□□□□ -0.09
TULP4-201ENST00000367094 DCAF1Q9Y4B6 1507 aa14.47□□□□□ -0.09
TULP4-201ENST00000367094 CSRNP3Q8WYN3 585 aa14.47□□□□□ -0.09
TULP4-201ENST00000367094 RTL5Q5HYW3 569 aaPredicted RBP14.46□□□□□ -0.09
TULP4-201ENST00000367094 MYT1LQ9UL68 1186 aa14.46□□□□□ -0.09
TULP4-201ENST00000367094 FAM50AQ14320 339 aaKnown RBP14.45□□□□□ -0.1
TULP4-201ENST00000367094 POLR3GLQ9BT43 218 aa14.39□□□□□ -0.11
TULP4-201ENST00000367094 ZNF316A6NFI3 1004 aaPredicted RBP14.37□□□□□ -0.11
TULP4-201ENST00000367094 RB1CC1Q8TDY2 1594 aa14.33□□□□□ -0.11
TULP4-201ENST00000367094 TRIM52Q96A61 297 aa14.33□□□□□ -0.12
TULP4-201ENST00000367094 NACADO15069 1562 aa14.29□□□□□ -0.12
TULP4-201ENST00000367094 ANP32CO43423 234 aa14.26□□□□□ -0.13
TULP4-201ENST00000367094 CLSPNQ9HAW4 1339 aa14.24□□□□□ -0.13
TULP4-201ENST00000367094 NEUROD1Q13562 356 aa14.24□□□□□ -0.13
TULP4-201ENST00000367094 EEA1Q15075 1411 aa14.24□□□□□ -0.13
TULP4-201ENST00000367094 CDK11AQ9UQ88 783 aaPredicted RBP14.2□□□□□ -0.14
TULP4-201ENST00000367094 RSF1Q96T23 1441 aaPredicted RBP14.17□□□□□ -0.14
TULP4-201ENST00000367094 ZBTB47Q9UFB7 747 aaPredicted RBP14.11□□□□□ -0.15
TULP4-201ENST00000367094 SLC4A1APQ9BWU0 796 aaKnown RBP14.1□□□□□ -0.15
TULP4-201ENST00000367094 GTF3C3Q9Y5Q9 886 aa14.1□□□□□ -0.15
TULP4-201ENST00000367094 CNGB1Q14028 1251 aaPredicted RBP14.09□□□□□ -0.15
TULP4-201ENST00000367094 FBLN2P98095 1184 aa14.08□□□□□ -0.16
TULP4-201ENST00000367094 GOLGA3Q08378 1498 aa14.07□□□□□ -0.16
TULP4-201ENST00000367094 ACIN1Q9UKV3 1341 aaKnown RBP14.07□□□□□ -0.16
TULP4-201ENST00000367094 P3H3Q8IVL6 736 aa14.07□□□□□ -0.16
TULP4-201ENST00000367094 CLIP1P30622 1438 aa14.04□□□□□ -0.16
TULP4-201ENST00000367094 BAZ1AQ9NRL2 1556 aaPredicted RBP14.04□□□□□ -0.16
TULP4-201ENST00000367094 TONSLQ96HA7 1378 aa14.03□□□□□ -0.16
TULP4-201ENST00000367094 ZNF326Q5BKZ1 582 aaKnown RBP14.03□□□□□ -0.16
TULP4-201ENST00000367094 WRNQ14191 1432 aaPredicted RBP eCLIP13.98□□□□□ -0.17
TULP4-201ENST00000367094 BAZ1BQ9UIG0 1483 aaKnown RBP13.98□□□□□ -0.17
TULP4-201ENST00000367094 TNIKQ9UKE5 1360 aa13.96□□□□□ -0.18
TULP4-201ENST00000367094 CEP162Q5TB80 1403 aa13.95□□□□□ -0.18
TULP4-201ENST00000367094 CEP164Q9UPV0 1460 aa13.95□□□□□ -0.18
TULP4-201ENST00000367094 MYO15BQ96JP2 1530 aa13.95□□□□□ -0.18
TULP4-201ENST00000367094 ZNF777Q9ULD5 760 aaPredicted RBP13.92□□□□□ -0.18
TULP4-201ENST00000367094 MTUS2Q5JR59 1369 aa13.91□□□□□ -0.18
TULP4-201ENST00000367094 KIF27Q86VH2 1401 aa13.9□□□□□ -0.18
TULP4-201ENST00000367094 BCANQ96GW7 911 aa13.89□□□□□ -0.19
TULP4-201ENST00000367094 NEFMP07197 916 aa13.89□□□□□ -0.19
TULP4-201ENST00000367094 ANP32BQ92688 251 aaKnown RBP13.88□□□□□ -0.19
TULP4-201ENST00000367094 GLIPR1L2Q4G1C9 344 aa13.87□□□□□ -0.19
TULP4-201ENST00000367094 ARID3CA6NKF2 412 aa13.86□□□□□ -0.19
TULP4-201ENST00000367094 CANXP27824 592 aaKnown RBP13.83□□□□□ -0.19
TULP4-201ENST00000367094 ANP32AP39687 249 aaKnown RBP13.82□□□□□ -0.2
TULP4-201ENST00000367094 TSPY4P0CV99 314 aa13.79□□□□□ -0.2
TULP4-201ENST00000367094 TSPY10P0CW01 314 aa13.79□□□□□ -0.2
TULP4-201ENST00000367094 NPM1P06748 294 aaKnown RBP eCLIP13.77□□□□□ -0.21
TULP4-201ENST00000367094 DDX10Q13206 875 aaKnown RBP13.76□□□□□ -0.21
TULP4-201ENST00000367094 CECR2Q9BXF3 1484 aa13.75□□□□□ -0.21
TULP4-201ENST00000367094 CHMP7Q8WUX9 453 aaPredicted RBP13.75□□□□□ -0.21
TULP4-201ENST00000367094 HNRNPUQ00839 825 aaKnown RBP eCLIP13.74□□□□□ -0.21
TULP4-201ENST00000367094 FHAD1B1AJZ9 1412 aa13.73□□□□□ -0.21
TULP4-201ENST00000367094 SMARCA2P51531 1590 aa13.72□□□□□ -0.21
TULP4-201ENST00000367094 CHIC2Q9UKJ5 165 aa13.72□□□□□ -0.21
TULP4-201ENST00000367094 FKBP8Q14318 412 aa13.71□□□□□ -0.21
TULP4-201ENST00000367094 ESF1Q9H501 851 aaKnown RBP13.7□□□□□ -0.22
TULP4-201ENST00000367094 EIF4G2P78344 907 aaKnown RBP eCLIP13.7□□□□□ -0.22
TULP4-201ENST00000367094 MROH2BQ7Z745 1585 aa13.68□□□□□ -0.22
TULP4-201ENST00000367094 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.67□□□□□ -0.22
TULP4-201ENST00000367094 UPF2Q9HAU5 1272 aaKnown RBP13.67□□□□□ -0.22
TULP4-201ENST00000367094 TMC1Q8TDI8 760 aa13.67□□□□□ -0.22
TULP4-201ENST00000367094 TOP2AP11388 1531 aaKnown RBP13.66□□□□□ -0.22
TULP4-201ENST00000367094 PLEKHD1A6NEE1 506 aa13.65□□□□□ -0.22
TULP4-201ENST00000367094 CCDC88BA6NC98 1476 aa13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms