RNA–Protein interactions for RNA: ENST00000349004.5

NDRG3-201, Transcript of NDRG family member 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NDRG3, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG3-201ENST00000349004 ADGRL1O94910 1474 aa8.81□□□□□ -1
NDRG3-201ENST00000349004 ARHGAP5Q13017 1502 aa8.81□□□□□ -1
NDRG3-201ENST00000349004 EFCAB2Q5VUJ9 269 aa8.81□□□□□ -1
NDRG3-201ENST00000349004 PELP1Q8IZL8 1130 aaKnown RBP8.81□□□□□ -1
NDRG3-201ENST00000349004 CFDP1Q9UEE9 299 aaPredicted RBP8.8□□□□□ -1
NDRG3-201ENST00000349004 CASKIN1Q8WXD9 1431 aa8.8□□□□□ -1
NDRG3-201ENST00000349004 CFAP43Q8NDM7 1665 aa8.8□□□□□ -1
NDRG3-201ENST00000349004 TROQ12816 1431 aaPredicted RBP8.8□□□□□ -1
NDRG3-201ENST00000349004 ABCA9Q8IUA7 1624 aa8.79□□□□□ -1
NDRG3-201ENST00000349004 RTN4Q9NQC3 1192 aaKnown RBP8.79□□□□□ -1
NDRG3-201ENST00000349004 HSPA2P54652 639 aa8.79□□□□□ -1
NDRG3-201ENST00000349004 ITGAEP38570 1179 aa8.78□□□□□ -1
NDRG3-201ENST00000349004 APLP2Q06481 763 aa8.77□□□□□ -1.01
NDRG3-201ENST00000349004 TRAPPC8Q9Y2L5 1435 aa8.77□□□□□ -1.01
NDRG3-201ENST00000349004 DENND4BO75064 1496 aaPredicted RBP8.77□□□□□ -1.01
NDRG3-201ENST00000349004 SENP3Q9H4L4 574 aaPredicted RBP8.77□□□□□ -1.01
NDRG3-201ENST00000349004 PLCH2O75038 1416 aa8.76□□□□□ -1.01
NDRG3-201ENST00000349004 CHIC2Q9UKJ5 165 aa8.76□□□□□ -1.01
NDRG3-201ENST00000349004 CCNB3Q8WWL7 1395 aa8.76□□□□□ -1.01
NDRG3-201ENST00000349004 GGT6Q6P531 493 aa8.76□□□□□ -1.01
NDRG3-201ENST00000349004 FYCO1Q9BQS8 1478 aa8.75□□□□□ -1.01
NDRG3-201ENST00000349004 ARHGEF12Q9NZN5 1544 aa8.75□□□□□ -1.01
NDRG3-201ENST00000349004 FRMPD1Q5SYB0 1578 aa8.74□□□□□ -1.01
NDRG3-201ENST00000349004 SIGLEC1Q9BZZ2 1709 aa8.73□□□□□ -1.01
NDRG3-201ENST00000349004 ZEB1P37275 1124 aaPredicted RBP8.73□□□□□ -1.01
NDRG3-201ENST00000349004 CDC42BPBQ9Y5S2 1711 aa8.73□□□□□ -1.01
NDRG3-201ENST00000349004 MYO5CQ9NQX4 1742 aa8.72□□□□□ -1.01
NDRG3-201ENST00000349004 VPS8Q8N3P4 1428 aa8.72□□□□□ -1.01
NDRG3-201ENST00000349004 FAM50AQ14320 339 aaKnown RBP8.72□□□□□ -1.01
NDRG3-201ENST00000349004 CCDC18Q5T9S5 1454 aa8.72□□□□□ -1.01
NDRG3-201ENST00000349004 ARAP3Q8WWN8 1544 aa8.72□□□□□ -1.01
NDRG3-201ENST00000349004 SYCP2Q9BX26 1530 aa8.72□□□□□ -1.01
NDRG3-201ENST00000349004 GPATCH8Q9UKJ3 1502 aaKnown RBP8.72□□□□□ -1.01
NDRG3-201ENST00000349004 NEO1Q92859 1461 aa8.72□□□□□ -1.01
NDRG3-201ENST00000349004 SPAG9O60271 1321 aaKnown RBP8.71□□□□□ -1.01
NDRG3-201ENST00000349004 CCER1Q8TC90 406 aaPredicted RBP8.71□□□□□ -1.02
NDRG3-201ENST00000349004 POGZQ7Z3K3 1410 aa8.71□□□□□ -1.02
NDRG3-201ENST00000349004 CDC42BPAQ5VT25 1732 aa8.7□□□□□ -1.02
NDRG3-201ENST00000349004 RICTORQ6R327 1708 aa8.7□□□□□ -1.02
NDRG3-201ENST00000349004 NCOA2Q15596 1464 aa8.69□□□□□ -1.02
NDRG3-201ENST00000349004 SCAF1Q9H7N4 1312 aaKnown RBP8.69□□□□□ -1.02
NDRG3-201ENST00000349004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.69□□□□□ -1.02
NDRG3-201ENST00000349004 ESF1Q9H501 851 aaKnown RBP8.69□□□□□ -1.02
NDRG3-201ENST00000349004 RRP7BPQ9NSQ0 103 aa8.68□□□□□ -1.02
NDRG3-201ENST00000349004 MADDQ8WXG6 1647 aa8.68□□□□□ -1.02
NDRG3-201ENST00000349004 ZFYVE16Q7Z3T8 1539 aa8.68□□□□□ -1.02
NDRG3-201ENST00000349004 SAMD9LQ8IVG5 1584 aa8.68□□□□□ -1.02
NDRG3-201ENST00000349004 KIF3BO15066 747 aa8.67□□□□□ -1.02
NDRG3-201ENST00000349004 PHLDB1Q86UU1 1377 aa8.67□□□□□ -1.02
NDRG3-201ENST00000349004 LRRC9Q6ZRR7 1453 aa8.67□□□□□ -1.02
NDRG3-201ENST00000349004 TIAM1Q13009 1591 aa8.66□□□□□ -1.02
NDRG3-201ENST00000349004 PREX2Q70Z35 1606 aa8.66□□□□□ -1.02
NDRG3-201ENST00000349004 RIMS1Q86UR5 1692 aaKnown RBP8.66□□□□□ -1.02
NDRG3-201ENST00000349004 PTPRMP28827 1452 aa8.66□□□□□ -1.02
NDRG3-201ENST00000349004 ZNF518AQ6AHZ1 1483 aa8.66□□□□□ -1.02
NDRG3-201ENST00000349004 MYT1Q01538 1121 aa8.66□□□□□ -1.02
NDRG3-201ENST00000349004 NCBP3Q53F19 620 aaKnown RBP8.64□□□□□ -1.03
NDRG3-201ENST00000349004 FBXO31Q5XUX0 539 aaPredicted RBP8.64□□□□□ -1.03
NDRG3-201ENST00000349004 ABCC1P33527 1531 aa8.64□□□□□ -1.03
NDRG3-201ENST00000349004 TSPY4P0CV99 314 aa8.64□□□□□ -1.03
NDRG3-201ENST00000349004 TSPY10P0CW01 314 aa8.64□□□□□ -1.03
NDRG3-201ENST00000349004 ARHGEF40Q8TER5 1519 aa8.64□□□□□ -1.03
NDRG3-201ENST00000349004 SUPT6HQ7KZ85 1726 aaKnown RBP8.64□□□□□ -1.03
NDRG3-201ENST00000349004 ABCA6Q8N139 1617 aa8.63□□□□□ -1.03
NDRG3-201ENST00000349004 HECW2Q9P2P5 1572 aa8.63□□□□□ -1.03
NDRG3-201ENST00000349004 ATP10AO60312 1499 aa8.63□□□□□ -1.03
NDRG3-201ENST00000349004 EHBP1L1Q8N3D4 1523 aa8.63□□□□□ -1.03
NDRG3-201ENST00000349004 CAMSAP2Q08AD1 1489 aa8.63□□□□□ -1.03
NDRG3-201ENST00000349004 CFAP74Q9C0B2 1584 aa8.61□□□□□ -1.03
NDRG3-201ENST00000349004 DIP2CQ9Y2E4 1556 aa8.61□□□□□ -1.03
NDRG3-201ENST00000349004 KIDINS220Q9ULH0 1771 aa8.61□□□□□ -1.03
NDRG3-201ENST00000349004 BCORL1Q5H9F3 1711 aa8.61□□□□□ -1.03
NDRG3-201ENST00000349004 CFAP65Q6ZU64 1925 aaKnown RBP8.61□□□□□ -1.03
NDRG3-201ENST00000349004 C9orf84Q5VXU9 1444 aa8.61□□□□□ -1.03
NDRG3-201ENST00000349004 ITSN2Q9NZM3 1697 aa8.6□□□□□ -1.03
NDRG3-201ENST00000349004 MBD5Q9P267 1494 aa8.6□□□□□ -1.03
NDRG3-201ENST00000349004 WASHC2CQ9Y4E1 1318 aa8.59□□□□□ -1.03
NDRG3-201ENST00000349004 ATP7AQ04656 1500 aa8.59□□□□□ -1.04
NDRG3-201ENST00000349004 ADAMTSL3P82987 1691 aa8.58□□□□□ -1.04
NDRG3-201ENST00000349004 MYOM3Q5VTT5 1437 aa8.58□□□□□ -1.04
NDRG3-201ENST00000349004 FER1L4A9Z1Z3 1794 aa8.58□□□□□ -1.04
NDRG3-201ENST00000349004 KDM5CP41229 1560 aa8.58□□□□□ -1.04
NDRG3-201ENST00000349004 ZMYM4Q5VZL5 1548 aa8.57□□□□□ -1.04
NDRG3-201ENST00000349004 NEUROD1Q13562 356 aa8.57□□□□□ -1.04
NDRG3-201ENST00000349004 A2MP01023 1474 aa8.57□□□□□ -1.04
NDRG3-201ENST00000349004 MLH3Q9UHC1 1453 aa8.57□□□□□ -1.04
NDRG3-201ENST00000349004 ILDR1Q86SU0 546 aaPredicted RBP8.56□□□□□ -1.04
NDRG3-201ENST00000349004 ZMYM3Q14202 1370 aa8.56□□□□□ -1.04
NDRG3-201ENST00000349004 NCKAP5LQ9HCH0 1330 aa8.56□□□□□ -1.04
NDRG3-201ENST00000349004 DIEXFQ68CQ4 756 aaKnown RBP8.55□□□□□ -1.04
NDRG3-201ENST00000349004 CCDC141Q6ZP82 1450 aa8.55□□□□□ -1.04
NDRG3-201ENST00000349004 MAGI2Q86UL8 1455 aa8.55□□□□□ -1.04
NDRG3-201ENST00000349004 PLEKHH2Q8IVE3 1493 aa8.55□□□□□ -1.04
NDRG3-201ENST00000349004 NUTM2DQ5VT03 806 aaPredicted RBP8.55□□□□□ -1.04
NDRG3-201ENST00000349004 FGD6Q6ZV73 1430 aa8.55□□□□□ -1.04
NDRG3-201ENST00000349004 LMTK3Q96Q04 1460 aa8.55□□□□□ -1.04
NDRG3-201ENST00000349004 KIF15Q9NS87 1388 aa8.54□□□□□ -1.04
NDRG3-201ENST00000349004 KIAA1107Q9UPP5 1409 aa8.54□□□□□ -1.04
NDRG3-201ENST00000349004 RBM33Q96EV2 1170 aaKnown RBP8.53□□□□□ -1.04
NDRG3-201ENST00000349004 ABCC5O15440 1437 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms