RNA–Protein interactions for RNA: ENST00000349004.5

NDRG3-201, Transcript of NDRG family member 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NDRG3, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG3-201ENST00000349004 NISCHQ9Y2I1 1504 aa13.32□□□□□ -0.28
NDRG3-201ENST00000349004 ABCC9O60706 1549 aa11.95□□□□□ -0.5
NDRG3-201ENST00000349004 DCAF8L2P0C7V8 631 aa11.71□□□□□ -0.54
NDRG3-201ENST00000349004 CCDC180Q9P1Z9 1646 aa11.66□□□□□ -0.54
NDRG3-201ENST00000349004 PABPN1Q86U42 306 aaKnown RBP eCLIP11.3□□□□□ -0.6
NDRG3-201ENST00000349004 RB1CC1Q8TDY2 1594 aa11.14□□□□□ -0.63
NDRG3-201ENST00000349004 DNAJC5BQ9UF47 199 aa11.13□□□□□ -0.63
NDRG3-201ENST00000349004 NACADO15069 1562 aa11.05□□□□□ -0.64
NDRG3-201ENST00000349004 ZCCHC6Q5VYS8 1495 aaKnown RBP11.05□□□□□ -0.64
NDRG3-201ENST00000349004 SCRIBQ14160 1630 aa11.01□□□□□ -0.65
NDRG3-201ENST00000349004 SHROOM4Q9ULL8 1493 aa10.99□□□□□ -0.65
NDRG3-201ENST00000349004 UNC13AQ9UPW8 1703 aa10.97□□□□□ -0.65
NDRG3-201ENST00000349004 BICRAQ9NZM4 1560 aa10.88□□□□□ -0.67
NDRG3-201ENST00000349004 MYO15BQ96JP2 1530 aa10.79□□□□□ -0.68
NDRG3-201ENST00000349004 DCAF1Q9Y4B6 1507 aa10.77□□□□□ -0.68
NDRG3-201ENST00000349004 CC2D2AQ9P2K1 1620 aa10.64□□□□□ -0.71
NDRG3-201ENST00000349004 EIF4G1Q04637 1599 aaKnown RBP10.62□□□□□ -0.71
NDRG3-201ENST00000349004 CECR2Q9BXF3 1484 aa10.62□□□□□ -0.71
NDRG3-201ENST00000349004 MROH2BQ7Z745 1585 aa10.39□□□□□ -0.75
NDRG3-201ENST00000349004 ATAD2BQ9ULI0 1458 aa10.35□□□□□ -0.75
NDRG3-201ENST00000349004 SMARCA4P51532 1647 aa10.35□□□□□ -0.75
NDRG3-201ENST00000349004 NESP48681 1621 aa10.32□□□□□ -0.76
NDRG3-201ENST00000349004 WIZO95785 1651 aa10.3□□□□□ -0.76
NDRG3-201ENST00000349004 BAZ1BQ9UIG0 1483 aaKnown RBP10.29□□□□□ -0.76
NDRG3-201ENST00000349004 SUPT5HO00267 1087 aaKnown RBP10.29□□□□□ -0.76
NDRG3-201ENST00000349004 BAZ1AQ9NRL2 1556 aaPredicted RBP10.29□□□□□ -0.76
NDRG3-201ENST00000349004 NCAPD3P42695 1498 aa10.26□□□□□ -0.77
NDRG3-201ENST00000349004 ERCC6Q03468 1493 aa10.24□□□□□ -0.77
NDRG3-201ENST00000349004 SMARCA2P51531 1590 aa10.22□□□□□ -0.77
NDRG3-201ENST00000349004 RSF1Q96T23 1441 aaPredicted RBP10.22□□□□□ -0.77
NDRG3-201ENST00000349004 HMGXB3Q12766 1538 aa10.14□□□□□ -0.79
NDRG3-201ENST00000349004 PEG3Q9GZU2 1588 aa10.08□□□□□ -0.8
NDRG3-201ENST00000349004 CADPSQ9ULU8 1353 aa10.05□□□□□ -0.8
NDRG3-201ENST00000349004 KIF21AQ7Z4S6 1674 aa10.05□□□□□ -0.8
NDRG3-201ENST00000349004 CCDC88BA6NC98 1476 aa10.03□□□□□ -0.8
NDRG3-201ENST00000349004 TOP2AP11388 1531 aaKnown RBP10.01□□□□□ -0.81
NDRG3-201ENST00000349004 PDS5BQ9NTI5 1447 aa10□□□□□ -0.81
NDRG3-201ENST00000349004 FANCD2Q9BXW9 1451 aa9.98□□□□□ -0.81
NDRG3-201ENST00000349004 LAMC3Q9Y6N6 1575 aa9.97□□□□□ -0.81
NDRG3-201ENST00000349004 CEP164Q9UPV0 1460 aa9.94□□□□□ -0.82
NDRG3-201ENST00000349004 THOC2Q8NI27 1593 aaKnown RBP9.93□□□□□ -0.82
NDRG3-201ENST00000349004 CFTRP13569 1480 aa9.92□□□□□ -0.82
NDRG3-201ENST00000349004 CUX2O14529 1486 aa9.89□□□□□ -0.83
NDRG3-201ENST00000349004 MRC2Q9UBG0 1479 aa9.89□□□□□ -0.83
NDRG3-201ENST00000349004 URB2Q14146 1524 aaKnown RBP9.89□□□□□ -0.83
NDRG3-201ENST00000349004 DNAJC5Q9H3Z4 198 aa9.89□□□□□ -0.83
NDRG3-201ENST00000349004 FBLN2P98095 1184 aa9.88□□□□□ -0.83
NDRG3-201ENST00000349004 TRIM41Q8WV44 630 aa9.85□□□□□ -0.83
NDRG3-201ENST00000349004 ZNF608Q9ULD9 1512 aaPredicted RBP9.84□□□□□ -0.83
NDRG3-201ENST00000349004 RAD54L2Q9Y4B4 1467 aa9.81□□□□□ -0.84
NDRG3-201ENST00000349004 WDR62O43379 1518 aa9.81□□□□□ -0.84
NDRG3-201ENST00000349004 TDRD9Q8NDG6 1382 aaKnown RBP9.8□□□□□ -0.84
NDRG3-201ENST00000349004 AQRO60306 1485 aaKnown RBP eCLIP9.8□□□□□ -0.84
NDRG3-201ENST00000349004 TOPBP1Q92547 1522 aa9.79□□□□□ -0.84
NDRG3-201ENST00000349004 ABCC8Q09428 1581 aa9.77□□□□□ -0.84
NDRG3-201ENST00000349004 SLC24A1O60721 1099 aa9.75□□□□□ -0.85
NDRG3-201ENST00000349004 POLA1P09884 1462 aaPredicted RBP9.73□□□□□ -0.85
NDRG3-201ENST00000349004 CUX1P39880 1505 aa9.72□□□□□ -0.85
NDRG3-201ENST00000349004 SOGA1O94964 1423 aa9.72□□□□□ -0.85
NDRG3-201ENST00000349004 FGD5Q6ZNL6 1462 aa9.71□□□□□ -0.85
NDRG3-201ENST00000349004 OSCARQ8IYS5 282 aa9.71□□□□□ -0.85
NDRG3-201ENST00000349004 EHMT2Q96KQ7 1210 aa9.71□□□□□ -0.86
NDRG3-201ENST00000349004 PRDM2Q13029 1718 aa9.7□□□□□ -0.86
NDRG3-201ENST00000349004 DNMBPQ6XZF7 1577 aa9.68□□□□□ -0.86
NDRG3-201ENST00000349004 TTBK1Q5TCY1 1321 aaPredicted RBP9.67□□□□□ -0.86
NDRG3-201ENST00000349004 CHMP7Q8WUX9 453 aaPredicted RBP9.66□□□□□ -0.86
NDRG3-201ENST00000349004 IFT140Q96RY7 1462 aa9.66□□□□□ -0.86
NDRG3-201ENST00000349004 CYB5RLQ6IPT4 315 aa9.66□□□□□ -0.86
NDRG3-201ENST00000349004 EIF4G3O43432 1585 aaKnown RBP9.66□□□□□ -0.86
NDRG3-201ENST00000349004 WRNQ14191 1432 aaPredicted RBP eCLIP9.64□□□□□ -0.877e-7■■■■■ 52.5
NDRG3-201ENST00000349004 SYNJ1O43426 1573 aa9.63□□□□□ -0.87
NDRG3-201ENST00000349004 TARBP1Q13395 1621 aaKnown RBP9.62□□□□□ -0.87
NDRG3-201ENST00000349004 SNAPC4Q5SXM2 1469 aa9.61□□□□□ -0.87
NDRG3-201ENST00000349004 FAM9AQ8IZU1 332 aaPredicted RBP9.61□□□□□ -0.87
NDRG3-201ENST00000349004 RANGAP1P46060 587 aaPredicted RBP9.57□□□□□ -0.88
NDRG3-201ENST00000349004 CHD1O14646 1710 aa9.57□□□□□ -0.88
NDRG3-201ENST00000349004 GAPVD1Q14C86 1478 aa9.57□□□□□ -0.88
NDRG3-201ENST00000349004 CHIC1Q5VXU3 224 aa9.55□□□□□ -0.88
NDRG3-201ENST00000349004 TRHP20396 242 aaPredicted RBP9.53□□□□□ -0.88
NDRG3-201ENST00000349004 GRIN2BQ13224 1484 aa9.52□□□□□ -0.89
NDRG3-201ENST00000349004 RUSC2Q8N2Y8 1516 aa9.51□□□□□ -0.89
NDRG3-201ENST00000349004 TOP2BQ02880 1626 aa9.51□□□□□ -0.89
NDRG3-201ENST00000349004 AEBP2Q6ZN18 517 aaPredicted RBP9.5□□□□□ -0.89
NDRG3-201ENST00000349004 ARHGEF11O15085 1522 aa9.5□□□□□ -0.89
NDRG3-201ENST00000349004 RIMBP3CA6NJZ7 1639 aa9.5□□□□□ -0.89
NDRG3-201ENST00000349004 RIMBP3BA6NNM3 1639 aa9.5□□□□□ -0.89
NDRG3-201ENST00000349004 RIMBP3Q9UFD9 1639 aa9.5□□□□□ -0.89
NDRG3-201ENST00000349004 ABCA10Q8WWZ4 1543 aa9.49□□□□□ -0.89
NDRG3-201ENST00000349004 PBRM1Q86U86 1689 aa9.48□□□□□ -0.89
NDRG3-201ENST00000349004 ERCC6L2Q5T890 1561 aa9.46□□□□□ -0.89
NDRG3-201ENST00000349004 WDR97A6NE52 1622 aa9.46□□□□□ -0.9
NDRG3-201ENST00000349004 BIVM-ERCC5R4GMW8 1640 aa9.46□□□□□ -0.9
NDRG3-201ENST00000349004 SYNJ2O15056 1496 aa9.46□□□□□ -0.9
NDRG3-201ENST00000349004 ABCA5Q8WWZ7 1642 aa9.45□□□□□ -0.9
NDRG3-201ENST00000349004 ARID3CA6NKF2 412 aa9.45□□□□□ -0.9
NDRG3-201ENST00000349004 MAGI1Q96QZ7 1491 aaPredicted RBP9.44□□□□□ -0.9
NDRG3-201ENST00000349004 ARAP1Q96P48 1450 aa9.43□□□□□ -0.9
NDRG3-201ENST00000349004 IGF1RP08069 1367 aa9.43□□□□□ -0.9
NDRG3-201ENST00000349004 GRIN2AQ12879 1464 aa9.42□□□□□ -0.9
NDRG3-201ENST00000349004 P3H3Q8IVL6 736 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 837.7 ms