RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 ZCCHC11Q5TAX3 1644 aaKnown RBP21.17■□□□□ 0.98
ATXN3-201ENST00000340660 ARAP3Q8WWN8 1544 aa21.15■□□□□ 0.98
ATXN3-201ENST00000340660 WDR7Q9Y4E6 1490 aa21.14■□□□□ 0.98
ATXN3-201ENST00000340660 ARID4BQ4LE39 1312 aaPredicted RBP21.12■□□□□ 0.97
ATXN3-201ENST00000340660 MED1Q15648 1581 aaPredicted RBP21.12■□□□□ 0.97
ATXN3-201ENST00000340660 YEATS2Q9ULM3 1422 aa21.12■□□□□ 0.97
ATXN3-201ENST00000340660 CFAP43Q8NDM7 1665 aa21.11■□□□□ 0.97
ATXN3-201ENST00000340660 STRCQ7RTU9 1775 aa21.09■□□□□ 0.97
ATXN3-201ENST00000340660 IQSEC2Q5JU85 1478 aa21.08■□□□□ 0.97
ATXN3-201ENST00000340660 LTBP4Q8N2S1 1624 aa21.08■□□□□ 0.97
ATXN3-201ENST00000340660 CARMIL2Q6F5E8 1435 aa21.06■□□□□ 0.96
ATXN3-201ENST00000340660 PITPNM1O00562 1244 aa21.04■□□□□ 0.96
ATXN3-201ENST00000340660 SSUH2Q9Y2M2 353 aa21.02■□□□□ 0.96
ATXN3-201ENST00000340660 ZNF692Q9BU19 519 aaPredicted RBP21.01■□□□□ 0.95
ATXN3-201ENST00000340660 BIVM-ERCC5R4GMW8 1640 aa21■□□□□ 0.95
ATXN3-201ENST00000340660 RAPGEF3O95398 923 aa20.99■□□□□ 0.95
ATXN3-201ENST00000340660 KCNH8Q96L42 1107 aa20.97■□□□□ 0.95
ATXN3-201ENST00000340660 PTPRTO14522 1441 aa20.95■□□□□ 0.94
ATXN3-201ENST00000340660 FRMPD1Q5SYB0 1578 aa20.93■□□□□ 0.94
ATXN3-201ENST00000340660 DISP1Q96F81 1524 aa20.92■□□□□ 0.94
ATXN3-201ENST00000340660 PREX1Q8TCU6 1659 aa20.92■□□□□ 0.94
ATXN3-201ENST00000340660 UBAP1LF5GYI3 381 aa20.91■□□□□ 0.94
ATXN3-201ENST00000340660 ARHGEF40Q8TER5 1519 aa20.88■□□□□ 0.93
ATXN3-201ENST00000340660 PIP4P2Q8N4L2 257 aa20.87■□□□□ 0.93
ATXN3-201ENST00000340660 TTC37Q6PGP7 1564 aa20.87■□□□□ 0.93
ATXN3-201ENST00000340660 HSPA1LP34931 641 aa20.85■□□□□ 0.93
ATXN3-201ENST00000340660 PHLDB1Q86UU1 1377 aa20.85■□□□□ 0.93
ATXN3-201ENST00000340660 SIGLEC1Q9BZZ2 1709 aa20.83■□□□□ 0.92
ATXN3-201ENST00000340660 IQGAP2Q13576 1575 aa20.81■□□□□ 0.92
ATXN3-201ENST00000340660 IGF1RP08069 1367 aa20.81■□□□□ 0.92
ATXN3-201ENST00000340660 POGZQ7Z3K3 1410 aa20.8■□□□□ 0.92
ATXN3-201ENST00000340660 FXR2P51116 673 aaKnown RBP eCLIP20.8■□□□□ 0.92
ATXN3-201ENST00000340660 FER1L4A9Z1Z3 1794 aa20.78■□□□□ 0.92
ATXN3-201ENST00000340660 FANCAO15360 1455 aa20.78■□□□□ 0.92
ATXN3-201ENST00000340660 SPDYE1Q8NFV5 336 aaPredicted RBP20.76■□□□□ 0.91
ATXN3-201ENST00000340660 CEBPAP49715 358 aaPredicted RBP20.75■□□□□ 0.91
ATXN3-201ENST00000340660 MLECQ14165 292 aa20.75■□□□□ 0.91
ATXN3-201ENST00000340660 UHRF1BP1Q6BDS2 1440 aa20.75■□□□□ 0.91
ATXN3-201ENST00000340660 NEO1Q92859 1461 aa20.73■□□□□ 0.91
ATXN3-201ENST00000340660 CLEC11AQ9Y240 323 aa20.71■□□□□ 0.91
ATXN3-201ENST00000340660 AKNAQ7Z591 1439 aa20.68■□□□□ 0.9
ATXN3-201ENST00000340660 KIAA0556O60303 1618 aa20.67■□□□□ 0.9
ATXN3-201ENST00000340660 ZNF335Q9H4Z2 1342 aaPredicted RBP20.67■□□□□ 0.9
ATXN3-201ENST00000340660 ABCA9Q8IUA7 1624 aa20.67■□□□□ 0.9
ATXN3-201ENST00000340660 UGGT2Q9NYU1 1516 aa20.65■□□□□ 0.9
ATXN3-201ENST00000340660 ARHGEF12Q9NZN5 1544 aa20.65■□□□□ 0.9
ATXN3-201ENST00000340660 RGS17Q9UGC6 210 aaPredicted RBP20.65■□□□□ 0.9
ATXN3-201ENST00000340660 NCOA1Q15788 1441 aa20.64■□□□□ 0.89
ATXN3-201ENST00000340660 SRCAPQ6ZRS2 3230 aa20.63■□□□□ 0.89
ATXN3-201ENST00000340660 ABCA8O94911 1581 aa20.62■□□□□ 0.89
ATXN3-201ENST00000340660 RICTORQ6R327 1708 aa20.61■□□□□ 0.89
ATXN3-201ENST00000340660 PIP4K2BP78356 416 aa20.61■□□□□ 0.89
ATXN3-201ENST00000340660 CARMIL1Q5VZK9 1371 aa20.59■□□□□ 0.89
ATXN3-201ENST00000340660 DENND4BO75064 1496 aaPredicted RBP20.58■□□□□ 0.89
ATXN3-201ENST00000340660 FHOD3Q2V2M9 1422 aa20.58■□□□□ 0.88
ATXN3-201ENST00000340660 ZFYVE16Q7Z3T8 1539 aa20.58■□□□□ 0.88
ATXN3-201ENST00000340660 ZMYM4Q5VZL5 1548 aa20.55■□□□□ 0.88
ATXN3-201ENST00000340660 SETD1BQ9UPS6 1966 aaKnown RBP20.54■□□□□ 0.88
ATXN3-201ENST00000340660 EFCAB5A4FU69 1503 aa20.53■□□□□ 0.88
ATXN3-201ENST00000340660 KIF27Q86VH2 1401 aa20.52■□□□□ 0.87
ATXN3-201ENST00000340660 SPDYE4A6NLX3 237 aa20.51■□□□□ 0.87
ATXN3-201ENST00000340660 ARID3CA6NKF2 412 aa20.47■□□□□ 0.87
ATXN3-201ENST00000340660 PRKAR2AP13861 404 aaKnown RBP20.47■□□□□ 0.87
ATXN3-201ENST00000340660 TOM1O60784 492 aa20.45■□□□□ 0.86
ATXN3-201ENST00000340660 CAMSAP1Q5T5Y3 1602 aa20.45■□□□□ 0.86
ATXN3-201ENST00000340660 ATP10BO94823 1461 aa20.44■□□□□ 0.86
ATXN3-201ENST00000340660 MAGI2Q86UL8 1455 aa20.44■□□□□ 0.86
ATXN3-201ENST00000340660 NCKAP5LQ9HCH0 1330 aa20.44■□□□□ 0.86
ATXN3-201ENST00000340660 POTEAQ6S8J7 498 aa20.43■□□□□ 0.86
ATXN3-201ENST00000340660 PRR29P0C7W0 189 aa20.42■□□□□ 0.86
ATXN3-201ENST00000340660 HECW1Q76N89 1606 aa20.41■□□□□ 0.86
ATXN3-201ENST00000340660 SETD1AO15047 1707 aaKnown RBP20.41■□□□□ 0.86
ATXN3-201ENST00000340660 C3P01024 1663 aa20.39■□□□□ 0.86
ATXN3-201ENST00000340660 ALKQ9UM73 1620 aa20.38■□□□□ 0.85
ATXN3-201ENST00000340660 TRAPPC8Q9Y2L5 1435 aa20.37■□□□□ 0.85
ATXN3-201ENST00000340660 ATP10AO60312 1499 aa20.37■□□□□ 0.85
ATXN3-201ENST00000340660 C9orf84Q5VXU9 1444 aa20.36■□□□□ 0.85
ATXN3-201ENST00000340660 HAX1O00165 279 aa20.34■□□□□ 0.85
ATXN3-201ENST00000340660 CHADLQ6NUI6 762 aa20.32■□□□□ 0.84
ATXN3-201ENST00000340660 SP7Q8TDD2 431 aaPredicted RBP20.29■□□□□ 0.84
ATXN3-201ENST00000340660 UPF1Q92900 1129 aaKnown RBP eCLIP20.28■□□□□ 0.84
ATXN3-201ENST00000340660 CFAP74Q9C0B2 1584 aa20.28■□□□□ 0.84
ATXN3-201ENST00000340660 TCOF1Q13428 1488 aaKnown RBP20.26■□□□□ 0.83
ATXN3-201ENST00000340660 GOLGA3Q08378 1498 aa20.25■□□□□ 0.83
ATXN3-201ENST00000340660 PKD2Q13563 968 aa20.25■□□□□ 0.83
ATXN3-201ENST00000340660 CPS1P31327 1500 aa20.24■□□□□ 0.83
ATXN3-201ENST00000340660 PTPRKQ15262 1439 aa20.24■□□□□ 0.83
ATXN3-201ENST00000340660 PLA2R1Q13018 1463 aa20.24■□□□□ 0.83
ATXN3-201ENST00000340660 RAPGEF2Q9Y4G8 1499 aa20.21■□□□□ 0.83
ATXN3-201ENST00000340660 EVX2Q03828 476 aa20.2■□□□□ 0.82
ATXN3-201ENST00000340660 STAG3Q9UJ98 1225 aa20.19■□□□□ 0.82
ATXN3-201ENST00000340660 SCAPERQ9BY12 1400 aa20.18■□□□□ 0.82
ATXN3-201ENST00000340660 SHANK2Q9UPX8 1470 aa20.16■□□□□ 0.82
ATXN3-201ENST00000340660 NPATQ14207 1427 aa20.14■□□□□ 0.81
ATXN3-201ENST00000340660 PROM2Q8N271 834 aa20.14■□□□□ 0.81
ATXN3-201ENST00000340660 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.12■□□□□ 0.81
ATXN3-201ENST00000340660 C19orf67A6NJJ6 358 aa20.12■□□□□ 0.81
ATXN3-201ENST00000340660 ZNF142P52746 1687 aaPredicted RBP20.1■□□□□ 0.81
ATXN3-201ENST00000340660 ESF1Q9H501 851 aaKnown RBP20.09■□□□□ 0.81
ATXN3-201ENST00000340660 AGLP35573 1532 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms