RNA–Protein interactions for RNA: ENST00000338222.6

UBQLN2-201, Transcript of ubiquilin 2, humanhuman

APPRIS P1 BASIC

Gene UBQLN2, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2-201ENST00000338222 BIVM-ERCC5R4GMW8 1640 aa13.01□□□□□ -0.33
UBQLN2-201ENST00000338222 CC2D1BQ5T0F9 858 aaKnown RBP13□□□□□ -0.33
UBQLN2-201ENST00000338222 SMG6Q86US8 1419 aaKnown RBP13□□□□□ -0.33
UBQLN2-201ENST00000338222 CDCA7LQ96GN5 454 aa12.99□□□□□ -0.33
UBQLN2-201ENST00000338222 USP35Q9P2H5 1018 aa12.99□□□□□ -0.33
UBQLN2-201ENST00000338222 PEG3Q9GZU2 1588 aa12.98□□□□□ -0.33
UBQLN2-201ENST00000338222 NFKBIBQ15653 356 aa12.98□□□□□ -0.33
UBQLN2-201ENST00000338222 BACH2Q9BYV9 841 aa12.98□□□□□ -0.33
UBQLN2-201ENST00000338222 FGD5Q6ZNL6 1462 aa12.98□□□□□ -0.33
UBQLN2-201ENST00000338222 FBLN2P98095 1184 aa12.97□□□□□ -0.33
UBQLN2-201ENST00000338222 PNISRQ8TF01 805 aaKnown RBP12.97□□□□□ -0.33
UBQLN2-201ENST00000338222 FRAT1Q92837 279 aaPredicted RBP12.97□□□□□ -0.33
UBQLN2-201ENST00000338222 CFTRP13569 1480 aa12.96□□□□□ -0.33
UBQLN2-201ENST00000338222 MYOM3Q5VTT5 1437 aa12.96□□□□□ -0.33
UBQLN2-201ENST00000338222 NCOA2Q15596 1464 aa12.96□□□□□ -0.33
UBQLN2-201ENST00000338222 MAP3K1Q13233 1512 aa12.96□□□□□ -0.34
UBQLN2-201ENST00000338222 CRBNQ96SW2 442 aa12.96□□□□□ -0.34
UBQLN2-201ENST00000338222 CASKIN1Q8WXD9 1431 aa12.96□□□□□ -0.34
UBQLN2-201ENST00000338222 RGL3Q3MIN7 710 aa12.95□□□□□ -0.34
UBQLN2-201ENST00000338222 NCOA1Q15788 1441 aa12.95□□□□□ -0.34
UBQLN2-201ENST00000338222 USP47Q96K76 1375 aa12.94□□□□□ -0.34
UBQLN2-201ENST00000338222 ST20-MTHFSA0A0A6YYL1 179 aa12.94□□□□□ -0.34
UBQLN2-201ENST00000338222 PKD2Q13563 968 aa12.94□□□□□ -0.34
UBQLN2-201ENST00000338222 RAD54L2Q9Y4B4 1467 aa12.94□□□□□ -0.34
UBQLN2-201ENST00000338222 PTPN23Q9H3S7 1636 aa12.94□□□□□ -0.34
UBQLN2-201ENST00000338222 ZNF644Q9H582 1327 aaPredicted RBP12.93□□□□□ -0.34
UBQLN2-201ENST00000338222 FYCO1Q9BQS8 1478 aa12.93□□□□□ -0.34
UBQLN2-201ENST00000338222 TDRD9Q8NDG6 1382 aaKnown RBP12.93□□□□□ -0.34
UBQLN2-201ENST00000338222 DCAF11Q8TEB1 546 aa12.93□□□□□ -0.34
UBQLN2-201ENST00000338222 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.91□□□□□ -0.34
UBQLN2-201ENST00000338222 FRAT2O75474 233 aaPredicted RBP12.91□□□□□ -0.34
UBQLN2-201ENST00000338222 SLKQ9H2G2 1235 aaPredicted RBP12.9□□□□□ -0.34
UBQLN2-201ENST00000338222 CANXP27824 592 aaKnown RBP12.9□□□□□ -0.34
UBQLN2-201ENST00000338222 MS4A1P11836 297 aa12.89□□□□□ -0.35
UBQLN2-201ENST00000338222 MYBBP1AQ9BQG0 1328 aaKnown RBP12.88□□□□□ -0.35
UBQLN2-201ENST00000338222 SPRYD3Q8NCJ5 442 aa12.88□□□□□ -0.35
UBQLN2-201ENST00000338222 CFDP1Q9UEE9 299 aaPredicted RBP12.86□□□□□ -0.35
UBQLN2-201ENST00000338222 CADPSQ9ULU8 1353 aa12.86□□□□□ -0.35
UBQLN2-201ENST00000338222 WDR43Q15061 677 aaKnown RBP eCLIP12.86□□□□□ -0.35
UBQLN2-201ENST00000338222 RALBP1Q15311 655 aa12.86□□□□□ -0.35
UBQLN2-201ENST00000338222 C20orf194Q5TEA3 1177 aa12.86□□□□□ -0.35
UBQLN2-201ENST00000338222 NLRP13Q86W25 1043 aa12.85□□□□□ -0.35
UBQLN2-201ENST00000338222 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.85□□□□□ -0.35
UBQLN2-201ENST00000338222 KIF15Q9NS87 1388 aa12.85□□□□□ -0.35
UBQLN2-201ENST00000338222 NAP1L5Q96NT1 182 aaPredicted RBP12.84□□□□□ -0.35
UBQLN2-201ENST00000338222 GZF1Q9H116 711 aaPredicted RBP12.84□□□□□ -0.35
UBQLN2-201ENST00000338222 KTN1Q86UP2 1357 aaKnown RBP12.83□□□□□ -0.36
UBQLN2-201ENST00000338222 RNF123Q5XPI4 1314 aa12.83□□□□□ -0.36
UBQLN2-201ENST00000338222 ARID4BQ4LE39 1312 aaPredicted RBP12.82□□□□□ -0.36
UBQLN2-201ENST00000338222 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.82□□□□□ -0.36
UBQLN2-201ENST00000338222 CFAP43Q8NDM7 1665 aa12.82□□□□□ -0.36
UBQLN2-201ENST00000338222 ANKRD30BQ9BXX2 1392 aa12.82□□□□□ -0.36
UBQLN2-201ENST00000338222 FAM161AQ3B820 660 aa12.81□□□□□ -0.36
UBQLN2-201ENST00000338222 NCAPD3P42695 1498 aa12.81□□□□□ -0.36
UBQLN2-201ENST00000338222 PDE3BQ13370 1112 aa12.81□□□□□ -0.36
UBQLN2-201ENST00000338222 DHX29Q7Z478 1369 aaKnown RBP12.8□□□□□ -0.36
UBQLN2-201ENST00000338222 WASHC2CQ9Y4E1 1318 aa12.79□□□□□ -0.36
UBQLN2-201ENST00000338222 ROCK2O75116 1388 aaKnown RBP12.79□□□□□ -0.36
UBQLN2-201ENST00000338222 CCDC146Q8IYE0 955 aa12.78□□□□□ -0.36
UBQLN2-201ENST00000338222 NEUROD2Q15784 382 aa12.77□□□□□ -0.36
UBQLN2-201ENST00000338222 NUP155O75694 1391 aa12.77□□□□□ -0.36
UBQLN2-201ENST00000338222 BECN1Q14457 450 aa12.77□□□□□ -0.36
UBQLN2-201ENST00000338222 KDM5BQ9UGL1 1544 aa12.77□□□□□ -0.37
UBQLN2-201ENST00000338222 BRD4O60885 1362 aaPredicted RBP12.77□□□□□ -0.37
UBQLN2-201ENST00000338222 UPF2Q9HAU5 1272 aaKnown RBP12.77□□□□□ -0.37
UBQLN2-201ENST00000338222 CENPQQ7L2Z9 268 aaPredicted RBP12.77□□□□□ -0.37
UBQLN2-201ENST00000338222 UBE2Q2Q8WVN8 375 aa12.77□□□□□ -0.37
UBQLN2-201ENST00000338222 PANK3Q9H999 370 aa12.77□□□□□ -0.37
UBQLN2-201ENST00000338222 TSPY4P0CV99 314 aa12.76□□□□□ -0.37
UBQLN2-201ENST00000338222 TSPY10P0CW01 314 aa12.76□□□□□ -0.37
UBQLN2-201ENST00000338222 RSPH6AQ9H0K4 717 aa12.76□□□□□ -0.37
UBQLN2-201ENST00000338222 POGKQ9P215 609 aa12.76□□□□□ -0.37
UBQLN2-201ENST00000338222 GLIPR1L2Q4G1C9 344 aa12.76□□□□□ -0.37
UBQLN2-201ENST00000338222 RPRD2Q5VT52 1461 aaKnown RBP12.76□□□□□ -0.37
UBQLN2-201ENST00000338222 FANCD2Q9BXW9 1451 aa12.76□□□□□ -0.37
UBQLN2-201ENST00000338222 EFCAB5A4FU69 1503 aa12.76□□□□□ -0.37
UBQLN2-201ENST00000338222 SUPT6HQ7KZ85 1726 aaKnown RBP12.75□□□□□ -0.37
UBQLN2-201ENST00000338222 ADAMTS8Q9UP79 889 aa12.74□□□□□ -0.37
UBQLN2-201ENST00000338222 KDM6BO15054 1643 aa12.74□□□□□ -0.37
UBQLN2-201ENST00000338222 KNSTRNQ9Y448 316 aa12.74□□□□□ -0.37
UBQLN2-201ENST00000338222 NBPF1Q3BBV0 1214 aa12.72□□□□□ -0.37
UBQLN2-201ENST00000338222 GOLGA2Q08379 1002 aa12.72□□□□□ -0.37
UBQLN2-201ENST00000338222 VSIG10Q8N0Z9 540 aa12.72□□□□□ -0.37
UBQLN2-201ENST00000338222 CDK13Q14004 1512 aaKnown RBP12.71□□□□□ -0.37
UBQLN2-201ENST00000338222 EHBP1L1Q8N3D4 1523 aa12.71□□□□□ -0.37
UBQLN2-201ENST00000338222 SPATA31E1Q6ZUB1 1445 aa12.71□□□□□ -0.38
UBQLN2-201ENST00000338222 MIA2Q96PC5 1412 aa12.71□□□□□ -0.38
UBQLN2-201ENST00000338222 SNAPC4Q5SXM2 1469 aa12.71□□□□□ -0.38
UBQLN2-201ENST00000338222 PNNQ9H307 717 aaKnown RBP12.7□□□□□ -0.38
UBQLN2-201ENST00000338222 DENND4BO75064 1496 aaPredicted RBP12.7□□□□□ -0.38
UBQLN2-201ENST00000338222 PLPPR3Q6T4P5 718 aa12.7□□□□□ -0.38
UBQLN2-201ENST00000338222 FAM43AQ8N2R8 423 aa12.69□□□□□ -0.38
UBQLN2-201ENST00000338222 POLA1P09884 1462 aaPredicted RBP12.69□□□□□ -0.38
UBQLN2-201ENST00000338222 HMGXB3Q12766 1538 aa12.68□□□□□ -0.38
UBQLN2-201ENST00000338222 TNNT2P45379 298 aaPredicted RBP12.68□□□□□ -0.38
UBQLN2-201ENST00000338222 L1TD1Q5T7N2 865 aaKnown RBP12.68□□□□□ -0.38
UBQLN2-201ENST00000338222 COG6Q9Y2V7 657 aa12.68□□□□□ -0.38
UBQLN2-201ENST00000338222 DAPK1P53355 1430 aa12.68□□□□□ -0.38
UBQLN2-201ENST00000338222 BCAR3O75815 825 aa12.68□□□□□ -0.38
UBQLN2-201ENST00000338222 TMF1P82094 1093 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms