RNA–Protein interactions for RNA: ENST00000338222.6

UBQLN2-201, Transcript of ubiquilin 2, humanhuman

APPRIS P1 BASIC

Gene UBQLN2, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2-201ENST00000338222 NISCHQ9Y2I1 1504 aa18.05■□□□□ 0.48
UBQLN2-201ENST00000338222 SUPT5HO00267 1087 aaKnown RBP16.75■□□□□ 0.27
UBQLN2-201ENST00000338222 SHROOM4Q9ULL8 1493 aa16.74■□□□□ 0.27
UBQLN2-201ENST00000338222 PCGF6Q9BYE7 350 aa16.44■□□□□ 0.22
UBQLN2-201ENST00000338222 HRCP23327 699 aa16.37■□□□□ 0.21
UBQLN2-201ENST00000338222 PPARGC1BQ86YN6 1023 aaKnown RBP16.3■□□□□ 0.2
UBQLN2-201ENST00000338222 DCAF8L2P0C7V8 631 aa16.22■□□□□ 0.19
UBQLN2-201ENST00000338222 CHIC1Q5VXU3 224 aa16■□□□□ 0.15
UBQLN2-201ENST00000338222 LOC105371045A0A1W2PR82 267 aa15.89■□□□□ 0.13
UBQLN2-201ENST00000338222 MYO15BQ96JP2 1530 aa15.85■□□□□ 0.13
UBQLN2-201ENST00000338222 EHMT2Q96KQ7 1210 aa15.81■□□□□ 0.12
UBQLN2-201ENST00000338222 PELP1Q8IZL8 1130 aaKnown RBP15.69■□□□□ 0.1
UBQLN2-201ENST00000338222 TRIM26Q12899 539 aaPredicted RBP15.66■□□□□ 0.1
UBQLN2-201ENST00000338222 FAM9AQ8IZU1 332 aaPredicted RBP15.62■□□□□ 0.09
UBQLN2-201ENST00000338222 ZEB1P37275 1124 aaPredicted RBP15.49■□□□□ 0.07
UBQLN2-201ENST00000338222 SCAF1Q9H7N4 1312 aaKnown RBP15.49■□□□□ 0.07
UBQLN2-201ENST00000338222 DCAF1Q9Y4B6 1507 aa15.37■□□□□ 0.05
UBQLN2-201ENST00000338222 TTBK1Q5TCY1 1321 aaPredicted RBP15.36■□□□□ 0.05
UBQLN2-201ENST00000338222 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
UBQLN2-201ENST00000338222 CCER1Q8TC90 406 aaPredicted RBP15.29■□□□□ 0.04
UBQLN2-201ENST00000338222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.25■□□□□ 0.03
UBQLN2-201ENST00000338222 ZCCHC6Q5VYS8 1495 aaKnown RBP15.24■□□□□ 0.03
UBQLN2-201ENST00000338222 GTF3C3Q9Y5Q9 886 aa15.21■□□□□ 0.03
UBQLN2-201ENST00000338222 CENPBP07199 599 aaPredicted RBP15.21■□□□□ 0.03
UBQLN2-201ENST00000338222 YTHDC1Q96MU7 727 aaKnown RBP15.2■□□□□ 0.02
UBQLN2-201ENST00000338222 NEUROD1Q13562 356 aa15.18■□□□□ 0.02
UBQLN2-201ENST00000338222 ACIN1Q9UKV3 1341 aaKnown RBP15.17■□□□□ 0.02
UBQLN2-201ENST00000338222 DIEXFQ68CQ4 756 aaKnown RBP15.1■□□□□ 0.01
UBQLN2-201ENST00000338222 CCDC180Q9P1Z9 1646 aa15.1■□□□□ 0.01
UBQLN2-201ENST00000338222 MYT1Q01538 1121 aa15.03■□□□□ -0
UBQLN2-201ENST00000338222 HNRNPUL2Q1KMD3 747 aaKnown RBP14.74□□□□□ -0.05
UBQLN2-201ENST00000338222 UBTFP17480 764 aaKnown RBP14.73□□□□□ -0.05
UBQLN2-201ENST00000338222 ZNF316A6NFI3 1004 aaPredicted RBP14.73□□□□□ -0.05
UBQLN2-201ENST00000338222 RANGAP1P46060 587 aaPredicted RBP14.72□□□□□ -0.05
UBQLN2-201ENST00000338222 MIER1Q8N108 512 aa14.68□□□□□ -0.06
UBQLN2-201ENST00000338222 RSF1Q96T23 1441 aaPredicted RBP14.63□□□□□ -0.07
UBQLN2-201ENST00000338222 APLP2Q06481 763 aa14.57□□□□□ -0.08
UBQLN2-201ENST00000338222 SCRIBQ14160 1630 aa14.55□□□□□ -0.08
UBQLN2-201ENST00000338222 RB1CC1Q8TDY2 1594 aa14.54□□□□□ -0.08
UBQLN2-201ENST00000338222 BCANQ96GW7 911 aa14.49□□□□□ -0.09
UBQLN2-201ENST00000338222 ABCC9O60706 1549 aa14.43□□□□□ -0.1
UBQLN2-201ENST00000338222 CEP162Q5TB80 1403 aa14.35□□□□□ -0.11
UBQLN2-201ENST00000338222 ITGAEP38570 1179 aa14.35□□□□□ -0.11
UBQLN2-201ENST00000338222 SUPT16HQ9Y5B9 1047 aaKnown RBP14.33□□□□□ -0.11
UBQLN2-201ENST00000338222 CSRNP3Q8WYN3 585 aa14.33□□□□□ -0.12
UBQLN2-201ENST00000338222 CECR2Q9BXF3 1484 aa14.32□□□□□ -0.12
UBQLN2-201ENST00000338222 ANP32EQ9BTT0 268 aa14.25□□□□□ -0.13
UBQLN2-201ENST00000338222 NEFLP07196 543 aa14.24□□□□□ -0.13
UBQLN2-201ENST00000338222 TSHZ2Q9NRE2 1034 aa14.22□□□□□ -0.13
UBQLN2-201ENST00000338222 SOGA1O94964 1423 aa14.22□□□□□ -0.13
UBQLN2-201ENST00000338222 FKBP8Q14318 412 aa14.22□□□□□ -0.13
UBQLN2-201ENST00000338222 BCL11AQ9H165 835 aa14.21□□□□□ -0.13
UBQLN2-201ENST00000338222 MROH2BQ7Z745 1585 aa14.2□□□□□ -0.14
UBQLN2-201ENST00000338222 ABCC8Q09428 1581 aa14.19□□□□□ -0.14
UBQLN2-201ENST00000338222 CCDC88BA6NC98 1476 aa14.19□□□□□ -0.14
UBQLN2-201ENST00000338222 ERICH6Q7L0X2 663 aa14.19□□□□□ -0.14
UBQLN2-201ENST00000338222 TNIKQ9UKE5 1360 aa14.16□□□□□ -0.14
UBQLN2-201ENST00000338222 KCNH8Q96L42 1107 aa14.14□□□□□ -0.15
UBQLN2-201ENST00000338222 WIZO95785 1651 aa14.13□□□□□ -0.15
UBQLN2-201ENST00000338222 WRNQ14191 1432 aaPredicted RBP eCLIP14.11□□□□□ -0.15
UBQLN2-201ENST00000338222 CLSPNQ9HAW4 1339 aa14.1□□□□□ -0.15
UBQLN2-201ENST00000338222 DDX10Q13206 875 aaKnown RBP14.1□□□□□ -0.15
UBQLN2-201ENST00000338222 TRIM52Q96A61 297 aa14.09□□□□□ -0.15
UBQLN2-201ENST00000338222 RUSC2Q8N2Y8 1516 aa14.09□□□□□ -0.15
UBQLN2-201ENST00000338222 HIRIP3Q9BW71 556 aaPredicted RBP14.07□□□□□ -0.16
UBQLN2-201ENST00000338222 ATP1B4Q9UN42 357 aaPredicted RBP14.06□□□□□ -0.16
UBQLN2-201ENST00000338222 CLIP1P30622 1438 aa14.05□□□□□ -0.16
UBQLN2-201ENST00000338222 GOLGA3Q08378 1498 aa14.02□□□□□ -0.17
UBQLN2-201ENST00000338222 IRX6P78412 446 aaPredicted RBP13.99□□□□□ -0.17
UBQLN2-201ENST00000338222 RBM19Q9Y4C8 960 aaKnown RBP13.98□□□□□ -0.17
UBQLN2-201ENST00000338222 PABPN1Q86U42 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
UBQLN2-201ENST00000338222 FAM50AQ14320 339 aaKnown RBP13.93□□□□□ -0.18
UBQLN2-201ENST00000338222 ANP32CO43423 234 aa13.92□□□□□ -0.18
UBQLN2-201ENST00000338222 EEA1Q15075 1411 aa13.91□□□□□ -0.18
UBQLN2-201ENST00000338222 KANK4Q5T7N3 995 aaPredicted RBP13.91□□□□□ -0.18
UBQLN2-201ENST00000338222 DHX57Q6P158 1386 aaKnown RBP13.9□□□□□ -0.18
UBQLN2-201ENST00000338222 CNGB1Q14028 1251 aaPredicted RBP13.89□□□□□ -0.19
UBQLN2-201ENST00000338222 CDK11AQ9UQ88 783 aaPredicted RBP13.89□□□□□ -0.19
UBQLN2-201ENST00000338222 SIN3AQ96ST3 1273 aa13.88□□□□□ -0.19
UBQLN2-201ENST00000338222 VPS8Q8N3P4 1428 aa13.88□□□□□ -0.19
UBQLN2-201ENST00000338222 CEP164Q9UPV0 1460 aa13.86□□□□□ -0.19
UBQLN2-201ENST00000338222 HNRNPUQ00839 825 aaKnown RBP eCLIP13.84□□□□□ -0.19
UBQLN2-201ENST00000338222 BAZ1AQ9NRL2 1556 aaPredicted RBP13.83□□□□□ -0.19
UBQLN2-201ENST00000338222 NBR1Q14596 966 aa13.79□□□□□ -0.2
UBQLN2-201ENST00000338222 RAPGEF2Q9Y4G8 1499 aa13.78□□□□□ -0.2
UBQLN2-201ENST00000338222 P3H3Q8IVL6 736 aa13.77□□□□□ -0.2
UBQLN2-201ENST00000338222 NACADO15069 1562 aa13.74□□□□□ -0.21
UBQLN2-201ENST00000338222 TOP2AP11388 1531 aaKnown RBP13.74□□□□□ -0.21
UBQLN2-201ENST00000338222 MSH5O43196 834 aa13.71□□□□□ -0.21
UBQLN2-201ENST00000338222 SMARCA2P51531 1590 aa13.71□□□□□ -0.22
UBQLN2-201ENST00000338222 CCNB3Q8WWL7 1395 aa13.71□□□□□ -0.22
UBQLN2-201ENST00000338222 RAB3GAP2Q9H2M9 1393 aa13.69□□□□□ -0.22
UBQLN2-201ENST00000338222 POLR3GLQ9BT43 218 aa13.69□□□□□ -0.22
UBQLN2-201ENST00000338222 SENP3-EIF4A1A0A087X0R7 540 aa13.69□□□□□ -0.22
UBQLN2-201ENST00000338222 FAM9BQ8IZU0 186 aa13.69□□□□□ -0.22
UBQLN2-201ENST00000338222 B4GALNT3Q6L9W6 998 aa13.66□□□□□ -0.22
UBQLN2-201ENST00000338222 DEKP35659 375 aaKnown RBP13.66□□□□□ -0.22
UBQLN2-201ENST00000338222 EIF4G1Q04637 1599 aaKnown RBP13.64□□□□□ -0.23
UBQLN2-201ENST00000338222 KIF21BO75037 1637 aa13.64□□□□□ -0.23
UBQLN2-201ENST00000338222 TONSLQ96HA7 1378 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms