RNA–Protein interactions for RNA: ENST00000338222.6

UBQLN2-201, Transcript of ubiquilin 2, humanhuman

APPRIS P1 BASIC

Gene UBQLN2, Length 4,230 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2-201ENST00000338222 NISCHQ9Y2I1 1504 aa18.05■□□□□ 0.48
UBQLN2-201ENST00000338222 SUPT5HO00267 1087 aaKnown RBP16.75■□□□□ 0.27
UBQLN2-201ENST00000338222 SHROOM4Q9ULL8 1493 aa16.74■□□□□ 0.27
UBQLN2-201ENST00000338222 PCGF6Q9BYE7 350 aa16.44■□□□□ 0.22
UBQLN2-201ENST00000338222 HRCP23327 699 aa16.37■□□□□ 0.21
UBQLN2-201ENST00000338222 PPARGC1BQ86YN6 1023 aaKnown RBP16.3■□□□□ 0.2
UBQLN2-201ENST00000338222 DCAF8L2P0C7V8 631 aa16.22■□□□□ 0.19
UBQLN2-201ENST00000338222 CHIC1Q5VXU3 224 aa16■□□□□ 0.15
UBQLN2-201ENST00000338222 LOC105371045A0A1W2PR82 267 aa15.89■□□□□ 0.13
UBQLN2-201ENST00000338222 MYO15BQ96JP2 1530 aa15.85■□□□□ 0.13
UBQLN2-201ENST00000338222 EHMT2Q96KQ7 1210 aa15.81■□□□□ 0.12
UBQLN2-201ENST00000338222 PELP1Q8IZL8 1130 aaKnown RBP15.69■□□□□ 0.1
UBQLN2-201ENST00000338222 TRIM26Q12899 539 aaPredicted RBP15.66■□□□□ 0.1
UBQLN2-201ENST00000338222 FAM9AQ8IZU1 332 aaPredicted RBP15.62■□□□□ 0.09
UBQLN2-201ENST00000338222 ZEB1P37275 1124 aaPredicted RBP15.49■□□□□ 0.07
UBQLN2-201ENST00000338222 SCAF1Q9H7N4 1312 aaKnown RBP15.49■□□□□ 0.07
UBQLN2-201ENST00000338222 DCAF1Q9Y4B6 1507 aa15.37■□□□□ 0.05
UBQLN2-201ENST00000338222 TTBK1Q5TCY1 1321 aaPredicted RBP15.36■□□□□ 0.05
UBQLN2-201ENST00000338222 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
UBQLN2-201ENST00000338222 CCER1Q8TC90 406 aaPredicted RBP15.29■□□□□ 0.04
UBQLN2-201ENST00000338222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.25■□□□□ 0.03
UBQLN2-201ENST00000338222 ZCCHC6Q5VYS8 1495 aaKnown RBP15.24■□□□□ 0.03
UBQLN2-201ENST00000338222 GTF3C3Q9Y5Q9 886 aa15.21■□□□□ 0.03
UBQLN2-201ENST00000338222 CENPBP07199 599 aaPredicted RBP15.21■□□□□ 0.03
UBQLN2-201ENST00000338222 YTHDC1Q96MU7 727 aaKnown RBP15.2■□□□□ 0.02
UBQLN2-201ENST00000338222 NEUROD1Q13562 356 aa15.18■□□□□ 0.02
UBQLN2-201ENST00000338222 ACIN1Q9UKV3 1341 aaKnown RBP15.17■□□□□ 0.02
UBQLN2-201ENST00000338222 DIEXFQ68CQ4 756 aaKnown RBP15.1■□□□□ 0.01
UBQLN2-201ENST00000338222 CCDC180Q9P1Z9 1646 aa15.1■□□□□ 0.01
UBQLN2-201ENST00000338222 MYT1Q01538 1121 aa15.03■□□□□ -0
UBQLN2-201ENST00000338222 HNRNPUL2Q1KMD3 747 aaKnown RBP14.74□□□□□ -0.05
UBQLN2-201ENST00000338222 UBTFP17480 764 aaKnown RBP14.73□□□□□ -0.05
UBQLN2-201ENST00000338222 ZNF316A6NFI3 1004 aaPredicted RBP14.73□□□□□ -0.05
UBQLN2-201ENST00000338222 RANGAP1P46060 587 aaPredicted RBP14.72□□□□□ -0.05
UBQLN2-201ENST00000338222 MIER1Q8N108 512 aa14.68□□□□□ -0.06
UBQLN2-201ENST00000338222 RSF1Q96T23 1441 aaPredicted RBP14.63□□□□□ -0.07
UBQLN2-201ENST00000338222 APLP2Q06481 763 aa14.57□□□□□ -0.08
UBQLN2-201ENST00000338222 SCRIBQ14160 1630 aa14.55□□□□□ -0.08
UBQLN2-201ENST00000338222 RB1CC1Q8TDY2 1594 aa14.54□□□□□ -0.08
UBQLN2-201ENST00000338222 BCANQ96GW7 911 aa14.49□□□□□ -0.09
UBQLN2-201ENST00000338222 ABCC9O60706 1549 aa14.43□□□□□ -0.1
UBQLN2-201ENST00000338222 CEP162Q5TB80 1403 aa14.35□□□□□ -0.11
UBQLN2-201ENST00000338222 ITGAEP38570 1179 aa14.35□□□□□ -0.11
UBQLN2-201ENST00000338222 SUPT16HQ9Y5B9 1047 aaKnown RBP14.33□□□□□ -0.11
UBQLN2-201ENST00000338222 CSRNP3Q8WYN3 585 aa14.33□□□□□ -0.12
UBQLN2-201ENST00000338222 CECR2Q9BXF3 1484 aa14.32□□□□□ -0.12
UBQLN2-201ENST00000338222 ANP32EQ9BTT0 268 aa14.25□□□□□ -0.13
UBQLN2-201ENST00000338222 NEFLP07196 543 aa14.24□□□□□ -0.13
UBQLN2-201ENST00000338222 TSHZ2Q9NRE2 1034 aa14.22□□□□□ -0.13
UBQLN2-201ENST00000338222 SOGA1O94964 1423 aa14.22□□□□□ -0.13
UBQLN2-201ENST00000338222 FKBP8Q14318 412 aa14.22□□□□□ -0.13
UBQLN2-201ENST00000338222 BCL11AQ9H165 835 aa14.21□□□□□ -0.13
UBQLN2-201ENST00000338222 MROH2BQ7Z745 1585 aa14.2□□□□□ -0.14
UBQLN2-201ENST00000338222 ABCC8Q09428 1581 aa14.19□□□□□ -0.14
UBQLN2-201ENST00000338222 CCDC88BA6NC98 1476 aa14.19□□□□□ -0.14
UBQLN2-201ENST00000338222 ERICH6Q7L0X2 663 aa14.19□□□□□ -0.14
UBQLN2-201ENST00000338222 TNIKQ9UKE5 1360 aa14.16□□□□□ -0.14
UBQLN2-201ENST00000338222 KCNH8Q96L42 1107 aa14.14□□□□□ -0.15
UBQLN2-201ENST00000338222 WIZO95785 1651 aa14.13□□□□□ -0.15
UBQLN2-201ENST00000338222 WRNQ14191 1432 aaPredicted RBP eCLIP14.11□□□□□ -0.15
UBQLN2-201ENST00000338222 CLSPNQ9HAW4 1339 aa14.1□□□□□ -0.15
UBQLN2-201ENST00000338222 DDX10Q13206 875 aaKnown RBP14.1□□□□□ -0.15
UBQLN2-201ENST00000338222 TRIM52Q96A61 297 aa14.09□□□□□ -0.15
UBQLN2-201ENST00000338222 RUSC2Q8N2Y8 1516 aa14.09□□□□□ -0.15
UBQLN2-201ENST00000338222 HIRIP3Q9BW71 556 aaPredicted RBP14.07□□□□□ -0.16
UBQLN2-201ENST00000338222 ATP1B4Q9UN42 357 aaPredicted RBP14.06□□□□□ -0.16
UBQLN2-201ENST00000338222 CLIP1P30622 1438 aa14.05□□□□□ -0.16
UBQLN2-201ENST00000338222 GOLGA3Q08378 1498 aa14.02□□□□□ -0.17
UBQLN2-201ENST00000338222 IRX6P78412 446 aaPredicted RBP13.99□□□□□ -0.17
UBQLN2-201ENST00000338222 RBM19Q9Y4C8 960 aaKnown RBP13.98□□□□□ -0.17
UBQLN2-201ENST00000338222 PABPN1Q86U42 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
UBQLN2-201ENST00000338222 FAM50AQ14320 339 aaKnown RBP13.93□□□□□ -0.18
UBQLN2-201ENST00000338222 ANP32CO43423 234 aa13.92□□□□□ -0.18
UBQLN2-201ENST00000338222 EEA1Q15075 1411 aa13.91□□□□□ -0.18
UBQLN2-201ENST00000338222 KANK4Q5T7N3 995 aaPredicted RBP13.91□□□□□ -0.18
UBQLN2-201ENST00000338222 DHX57Q6P158 1386 aaKnown RBP13.9□□□□□ -0.18
UBQLN2-201ENST00000338222 CNGB1Q14028 1251 aaPredicted RBP13.89□□□□□ -0.19
UBQLN2-201ENST00000338222 CDK11AQ9UQ88 783 aaPredicted RBP13.89□□□□□ -0.19
UBQLN2-201ENST00000338222 SIN3AQ96ST3 1273 aa13.88□□□□□ -0.19
UBQLN2-201ENST00000338222 VPS8Q8N3P4 1428 aa13.88□□□□□ -0.19
UBQLN2-201ENST00000338222 CEP164Q9UPV0 1460 aa13.86□□□□□ -0.19
UBQLN2-201ENST00000338222 HNRNPUQ00839 825 aaKnown RBP eCLIP13.84□□□□□ -0.19
UBQLN2-201ENST00000338222 BAZ1AQ9NRL2 1556 aaPredicted RBP13.83□□□□□ -0.19
UBQLN2-201ENST00000338222 NBR1Q14596 966 aa13.79□□□□□ -0.2
UBQLN2-201ENST00000338222 RAPGEF2Q9Y4G8 1499 aa13.78□□□□□ -0.2
UBQLN2-201ENST00000338222 P3H3Q8IVL6 736 aa13.77□□□□□ -0.2
UBQLN2-201ENST00000338222 NACADO15069 1562 aa13.74□□□□□ -0.21
UBQLN2-201ENST00000338222 TOP2AP11388 1531 aaKnown RBP13.74□□□□□ -0.21
UBQLN2-201ENST00000338222 MSH5O43196 834 aa13.71□□□□□ -0.21
UBQLN2-201ENST00000338222 SMARCA2P51531 1590 aa13.71□□□□□ -0.22
UBQLN2-201ENST00000338222 CCNB3Q8WWL7 1395 aa13.71□□□□□ -0.22
UBQLN2-201ENST00000338222 RAB3GAP2Q9H2M9 1393 aa13.69□□□□□ -0.22
UBQLN2-201ENST00000338222 POLR3GLQ9BT43 218 aa13.69□□□□□ -0.22
UBQLN2-201ENST00000338222 SENP3-EIF4A1A0A087X0R7 540 aa13.69□□□□□ -0.22
UBQLN2-201ENST00000338222 FAM9BQ8IZU0 186 aa13.69□□□□□ -0.22
UBQLN2-201ENST00000338222 B4GALNT3Q6L9W6 998 aa13.66□□□□□ -0.22
UBQLN2-201ENST00000338222 DEKP35659 375 aaKnown RBP13.66□□□□□ -0.22
UBQLN2-201ENST00000338222 EIF4G1Q04637 1599 aaKnown RBP13.64□□□□□ -0.23
UBQLN2-201ENST00000338222 KIF21BO75037 1637 aa13.64□□□□□ -0.23
UBQLN2-201ENST00000338222 TONSLQ96HA7 1378 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms