RNA–Protein interactions for RNA: ENST00000325438.12

PACS2-201, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACS2, Length 3,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-201ENST00000325438 PKD2Q13563 968 aa31.45■■■□□ 2.63
PACS2-201ENST00000325438 CANXP27824 592 aaKnown RBP31.45■■■□□ 2.62
PACS2-201ENST00000325438 DCAF11Q8TEB1 546 aa31.43■■■□□ 2.62
PACS2-201ENST00000325438 CRBNQ96SW2 442 aa31.43■■■□□ 2.62
PACS2-201ENST00000325438 TDRD9Q8NDG6 1382 aaKnown RBP31.42■■■□□ 2.62
PACS2-201ENST00000325438 USP35Q9P2H5 1018 aa31.41■■■□□ 2.62
PACS2-201ENST00000325438 ST20-MTHFSA0A0A6YYL1 179 aa31.41■■■□□ 2.62
PACS2-201ENST00000325438 NFKBIBQ15653 356 aa31.41■■■□□ 2.62
PACS2-201ENST00000325438 PCF11O94913 1555 aaKnown RBP31.4■■■□□ 2.62
PACS2-201ENST00000325438 FGD5Q6ZNL6 1462 aa31.4■■■□□ 2.62
PACS2-201ENST00000325438 PNISRQ8TF01 805 aaKnown RBP31.4■■■□□ 2.62
PACS2-201ENST00000325438 SMG6Q86US8 1419 aaKnown RBP31.39■■■□□ 2.62
PACS2-201ENST00000325438 ZNF644Q9H582 1327 aaPredicted RBP31.39■■■□□ 2.62
PACS2-201ENST00000325438 BACH2Q9BYV9 841 aa31.38■■■□□ 2.61
PACS2-201ENST00000325438 FRAT1Q92837 279 aaPredicted RBP31.38■■■□□ 2.61
PACS2-201ENST00000325438 USP47Q96K76 1375 aa31.37■■■□□ 2.61
PACS2-201ENST00000325438 CFTRP13569 1480 aa31.36■■■□□ 2.61
PACS2-201ENST00000325438 MYOM3Q5VTT5 1437 aa31.36■■■□□ 2.61
PACS2-201ENST00000325438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.36■■■□□ 2.611e-6■■□□□ 14.1
PACS2-201ENST00000325438 NCOA2Q15596 1464 aa31.35■■■□□ 2.61
PACS2-201ENST00000325438 RAD54L2Q9Y4B4 1467 aa31.34■■■□□ 2.61
PACS2-201ENST00000325438 CASKIN1Q8WXD9 1431 aa31.34■■■□□ 2.61
PACS2-201ENST00000325438 BICRAQ9NZM4 1560 aa31.33■■■□□ 2.61
PACS2-201ENST00000325438 SLKQ9H2G2 1235 aaPredicted RBP31.33■■■□□ 2.61
PACS2-201ENST00000325438 UNC13AQ9UPW8 1703 aa31.32■■■□□ 2.6
PACS2-201ENST00000325438 CFDP1Q9UEE9 299 aaPredicted RBP31.32■■■□□ 2.6
PACS2-201ENST00000325438 FBLN2P98095 1184 aa31.32■■■□□ 2.6
PACS2-201ENST00000325438 WDR43Q15061 677 aaKnown RBP eCLIP31.31■■■□□ 2.6
PACS2-201ENST00000325438 SPRYD3Q8NCJ5 442 aa31.28■■■□□ 2.6
PACS2-201ENST00000325438 NCOA1Q15788 1441 aa31.26■■■□□ 2.6
PACS2-201ENST00000325438 FRAT2O75474 233 aaPredicted RBP31.24■■■□□ 2.59
PACS2-201ENST00000325438 BIVM-ERCC5R4GMW8 1640 aa31.23■■■□□ 2.59
PACS2-201ENST00000325438 FYCO1Q9BQS8 1478 aa31.22■■■□□ 2.59
PACS2-201ENST00000325438 MYBBP1AQ9BQG0 1328 aaKnown RBP31.22■■■□□ 2.59
PACS2-201ENST00000325438 MAP3K1Q13233 1512 aa31.22■■■□□ 2.59
PACS2-201ENST00000325438 CADPSQ9ULU8 1353 aa31.22■■■□□ 2.59
PACS2-201ENST00000325438 PEG3Q9GZU2 1588 aa31.2■■■□□ 2.59
PACS2-201ENST00000325438 MS4A1P11836 297 aa31.2■■■□□ 2.59
PACS2-201ENST00000325438 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.2■■■□□ 2.59
PACS2-201ENST00000325438 NLRP13Q86W25 1043 aa31.2■■■□□ 2.58
PACS2-201ENST00000325438 RALBP1Q15311 655 aa31.19■■■□□ 2.58
PACS2-201ENST00000325438 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.17■■■□□ 2.585e-7■■■■■ 124.4
PACS2-201ENST00000325438 GZF1Q9H116 711 aaPredicted RBP31.16■■■□□ 2.58
PACS2-201ENST00000325438 NAP1L5Q96NT1 182 aaPredicted RBP31.16■■■□□ 2.58
PACS2-201ENST00000325438 PTPN23Q9H3S7 1636 aa31.16■■■□□ 2.58
PACS2-201ENST00000325438 KIF15Q9NS87 1388 aa31.15■■■□□ 2.58
PACS2-201ENST00000325438 KTN1Q86UP2 1357 aaKnown RBP31.14■■■□□ 2.58
PACS2-201ENST00000325438 ARID4BQ4LE39 1312 aaPredicted RBP31.13■■■□□ 2.57
PACS2-201ENST00000325438 C20orf194Q5TEA3 1177 aa31.12■■■□□ 2.57
PACS2-201ENST00000325438 TSPY4P0CV99 314 aa31.12■■■□□ 2.57
PACS2-201ENST00000325438 TSPY10P0CW01 314 aa31.12■■■□□ 2.57
PACS2-201ENST00000325438 NEUROD2Q15784 382 aa31.11■■■□□ 2.57
PACS2-201ENST00000325438 UPF2Q9HAU5 1272 aaKnown RBP31.08■■■□□ 2.57
PACS2-201ENST00000325438 PDE3BQ13370 1112 aa31.06■■■□□ 2.56
PACS2-201ENST00000325438 FAM161AQ3B820 660 aa31.06■■■□□ 2.56
PACS2-201ENST00000325438 CCDC146Q8IYE0 955 aa31.05■■■□□ 2.56
PACS2-201ENST00000325438 ROCK2O75116 1388 aaKnown RBP31.04■■■□□ 2.56
PACS2-201ENST00000325438 NUP155O75694 1391 aa31.04■■■□□ 2.56
PACS2-201ENST00000325438 BECN1Q14457 450 aa31.04■■■□□ 2.56
PACS2-201ENST00000325438 KNSTRNQ9Y448 316 aa31.01■■■□□ 2.55
PACS2-201ENST00000325438 ANKRD30BQ9BXX2 1392 aa31.01■■■□□ 2.55
PACS2-201ENST00000325438 NCAPD3P42695 1498 aa31■■■□□ 2.55
PACS2-201ENST00000325438 PANK3Q9H999 370 aa31■■■□□ 2.55
PACS2-201ENST00000325438 GLIPR1L2Q4G1C9 344 aa30.96■■■□□ 2.55
PACS2-201ENST00000325438 CENPQQ7L2Z9 268 aaPredicted RBP30.95■■■□□ 2.54
PACS2-201ENST00000325438 RNF123Q5XPI4 1314 aa30.92■■■□□ 2.54
PACS2-201ENST00000325438 FANCD2Q9BXW9 1451 aa30.92■■■□□ 2.54
PACS2-201ENST00000325438 BRD4O60885 1362 aaPredicted RBP30.91■■■□□ 2.54
PACS2-201ENST00000325438 ADAMTS8Q9UP79 889 aa30.91■■■□□ 2.54
PACS2-201ENST00000325438 DHX29Q7Z478 1369 aaKnown RBP30.89■■■□□ 2.54
PACS2-201ENST00000325438 TNNT2P45379 298 aaPredicted RBP30.89■■■□□ 2.54
PACS2-201ENST00000325438 UBE2Q2Q8WVN8 375 aa30.89■■■□□ 2.54
PACS2-201ENST00000325438 POGKQ9P215 609 aa30.88■■■□□ 2.53
PACS2-201ENST00000325438 GOLGA2Q08379 1002 aa30.88■■■□□ 2.53
PACS2-201ENST00000325438 NBPF1Q3BBV0 1214 aa30.86■■■□□ 2.53
PACS2-201ENST00000325438 RSPH6AQ9H0K4 717 aa30.86■■■□□ 2.53
PACS2-201ENST00000325438 WASHC2CQ9Y4E1 1318 aa30.84■■■□□ 2.53
PACS2-201ENST00000325438 HSP90AA1P07900 732 aaKnown RBP30.82■■■□□ 2.52
PACS2-201ENST00000325438 TMF1P82094 1093 aa30.82■■■□□ 2.52
PACS2-201ENST00000325438 PNNQ9H307 717 aaKnown RBP30.81■■■□□ 2.52
PACS2-201ENST00000325438 RPRD2Q5VT52 1461 aaKnown RBP30.81■■■□□ 2.52
PACS2-201ENST00000325438 CLUAP1Q96AJ1 413 aa30.81■■■□□ 2.52
PACS2-201ENST00000325438 COG6Q9Y2V7 657 aa30.8■■■□□ 2.52
PACS2-201ENST00000325438 EFCAB5A4FU69 1503 aa30.79■■■□□ 2.52
PACS2-201ENST00000325438 VSIG10Q8N0Z9 540 aa30.78■■■□□ 2.52
PACS2-201ENST00000325438 BCL2L13Q9BXK5 485 aa30.77■■■□□ 2.52
PACS2-201ENST00000325438 CFAP43Q8NDM7 1665 aa30.77■■■□□ 2.52
PACS2-201ENST00000325438 PLEKHD1A6NEE1 506 aa30.76■■■□□ 2.51
PACS2-201ENST00000325438 HNRNPMP52272 730 aaKnown RBP eCLIP30.76■■■□□ 2.512e-7■■■■□ 26.4
PACS2-201ENST00000325438 L1TD1Q5T7N2 865 aaKnown RBP30.76■■■□□ 2.51
PACS2-201ENST00000325438 APAF1O14727 1248 aa30.75■■■□□ 2.51
PACS2-201ENST00000325438 CDK13Q14004 1512 aaKnown RBP30.74■■■□□ 2.51
PACS2-201ENST00000325438 BCAR3O75815 825 aa30.74■■■□□ 2.51
PACS2-201ENST00000325438 TRIM44Q96DX7 344 aaPredicted RBP30.72■■■□□ 2.51
PACS2-201ENST00000325438 SUPT6HQ7KZ85 1726 aaKnown RBP30.72■■■□□ 2.51
PACS2-201ENST00000325438 SENP3Q9H4L4 574 aaPredicted RBP30.71■■■□□ 2.51
PACS2-201ENST00000325438 ANKRD30AQ9BXX3 1397 aa30.71■■■□□ 2.51
PACS2-201ENST00000325438 MIA2Q96PC5 1412 aa30.7■■■□□ 2.51
PACS2-201ENST00000325438 GOLGA6L3A6NEY3 463 aa30.7■■■□□ 2.51
PACS2-201ENST00000325438 EHBP1L1Q8N3D4 1523 aa30.7■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms