RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 RALBP1Q15311 655 aa22.28■■□□□ 1.16
GABRB3-202ENST00000311550 DEKP35659 375 aaKnown RBP22.27■■□□□ 1.16
GABRB3-202ENST00000311550 IGF1RP08069 1367 aa22.26■■□□□ 1.15
GABRB3-202ENST00000311550 MORC1Q86VD1 984 aa22.26■■□□□ 1.15
GABRB3-202ENST00000311550 KANK1Q14678 1352 aa22.25■■□□□ 1.15
GABRB3-202ENST00000311550 CCDC18Q5T9S5 1454 aa22.24■■□□□ 1.15
GABRB3-202ENST00000311550 NCLP19338 710 aaKnown RBP22.22■■□□□ 1.15
GABRB3-202ENST00000311550 FANCD2Q9BXW9 1451 aa22.22■■□□□ 1.15
GABRB3-202ENST00000311550 PRKRIP1Q9H875 184 aaPredicted RBP22.21■■□□□ 1.15
GABRB3-202ENST00000311550 TRIM44Q96DX7 344 aaPredicted RBP22.2■■□□□ 1.14
GABRB3-202ENST00000311550 GGT6Q6P531 493 aa22.2■■□□□ 1.14
GABRB3-202ENST00000311550 PHLDB1Q86UU1 1377 aa22.2■■□□□ 1.14
GABRB3-202ENST00000311550 GOLGA6L22H0YM25 854 aa22.2■■□□□ 1.14
GABRB3-202ENST00000311550 SRPK2P78362 688 aaKnown RBP22.19■■□□□ 1.14
GABRB3-202ENST00000311550 ST20-MTHFSA0A0A6YYL1 179 aa22.18■■□□□ 1.14
GABRB3-202ENST00000311550 ARID4BQ4LE39 1312 aaPredicted RBP22.18■■□□□ 1.14
GABRB3-202ENST00000311550 FGD5Q6ZNL6 1462 aa22.17■■□□□ 1.14
GABRB3-202ENST00000311550 NLRP13Q86W25 1043 aa22.15■■□□□ 1.14
GABRB3-202ENST00000311550 STK26Q9P289 416 aa22.15■■□□□ 1.14
GABRB3-202ENST00000311550 SPRYD3Q8NCJ5 442 aa22.14■■□□□ 1.14
GABRB3-202ENST00000311550 TPRNQ4KMQ1 711 aa22.14■■□□□ 1.13
GABRB3-202ENST00000311550 TCERG1O14776 1098 aaKnown RBP22.13■■□□□ 1.13
GABRB3-202ENST00000311550 RAD54L2Q9Y4B4 1467 aa22.13■■□□□ 1.13
GABRB3-202ENST00000311550 EFCAB2Q5VUJ9 269 aa22.12■■□□□ 1.13
GABRB3-202ENST00000311550 MS4A1P11836 297 aa22.12■■□□□ 1.13
GABRB3-202ENST00000311550 GLIPR1L2Q4G1C9 344 aa22.12■■□□□ 1.13
GABRB3-202ENST00000311550 CCDC146Q8IYE0 955 aa22.11■■□□□ 1.13
GABRB3-202ENST00000311550 JPH4Q96JJ6 628 aa22.11■■□□□ 1.13
GABRB3-202ENST00000311550 SYNJ1O43426 1573 aa22.11■■□□□ 1.13
GABRB3-202ENST00000311550 ARAP1Q96P48 1450 aa22.1■■□□□ 1.13
GABRB3-202ENST00000311550 CASC1Q6TDU7 716 aa22.1■■□□□ 1.13
GABRB3-202ENST00000311550 FGD6Q6ZV73 1430 aa22.08■■□□□ 1.13
GABRB3-202ENST00000311550 HSP90AB1P08238 724 aaKnown RBP22.08■■□□□ 1.13
GABRB3-202ENST00000311550 SOX12O15370 315 aa22.08■■□□□ 1.13
GABRB3-202ENST00000311550 LRRC9Q6ZRR7 1453 aa22.08■■□□□ 1.12
GABRB3-202ENST00000311550 U2AF1L5P0DN76 240 aaPredicted RBP22.08■■□□□ 1.12
GABRB3-202ENST00000311550 U2AF1Q01081 240 aaKnown RBP eCLIP22.08■■□□□ 1.12
GABRB3-202ENST00000311550 KIF3BO15066 747 aa22.07■■□□□ 1.12
GABRB3-202ENST00000311550 MLECQ14165 292 aa22.07■■□□□ 1.12
GABRB3-202ENST00000311550 KIF15Q9NS87 1388 aa22.06■■□□□ 1.12
GABRB3-202ENST00000311550 IPO9Q96P70 1041 aaKnown RBP22.06■■□□□ 1.12
GABRB3-202ENST00000311550 USP47Q96K76 1375 aa22.06■■□□□ 1.12
GABRB3-202ENST00000311550 MYBBP1AQ9BQG0 1328 aaKnown RBP22.05■■□□□ 1.12
GABRB3-202ENST00000311550 GOLGA2Q08379 1002 aa22.05■■□□□ 1.12
GABRB3-202ENST00000311550 ZBED9Q6R2W3 1325 aa22.05■■□□□ 1.12
GABRB3-202ENST00000311550 ZNF644Q9H582 1327 aaPredicted RBP22.04■■□□□ 1.12
GABRB3-202ENST00000311550 PNNQ9H307 717 aaKnown RBP22.04■■□□□ 1.12
GABRB3-202ENST00000311550 PANK3Q9H999 370 aa22.04■■□□□ 1.12
GABRB3-202ENST00000311550 PLIN1O60240 522 aa22.02■■□□□ 1.12
GABRB3-202ENST00000311550 PDE3BQ13370 1112 aa22.01■■□□□ 1.11
GABRB3-202ENST00000311550 CHMP4BQ9H444 224 aaKnown RBP22.01■■□□□ 1.11
GABRB3-202ENST00000311550 A0A0G2JS52 829 aa22.01■■□□□ 1.11
GABRB3-202ENST00000311550 HSCBQ8IWL3 235 aa22.01■■□□□ 1.11
GABRB3-202ENST00000311550 SLKQ9H2G2 1235 aaPredicted RBP22■■□□□ 1.11
GABRB3-202ENST00000311550 MYOM3Q5VTT5 1437 aa22■■□□□ 1.11
GABRB3-202ENST00000311550 NUTM2DQ5VT03 806 aaPredicted RBP21.99■■□□□ 1.11
GABRB3-202ENST00000311550 EXOC6Q8TAG9 804 aa21.99■■□□□ 1.11
GABRB3-202ENST00000311550 CLUAP1Q96AJ1 413 aa21.99■■□□□ 1.11
GABRB3-202ENST00000311550 UACAQ9BZF9 1416 aa21.99■■□□□ 1.11
GABRB3-202ENST00000311550 CCDC144AA2RUR9 1427 aa21.98■■□□□ 1.11
GABRB3-202ENST00000311550 RRBP1Q9P2E9 1410 aaKnown RBP21.98■■□□□ 1.11
GABRB3-202ENST00000311550 GAPVD1Q14C86 1478 aa21.98■■□□□ 1.11
GABRB3-202ENST00000311550 SPAG9O60271 1321 aaKnown RBP21.97■■□□□ 1.11
GABRB3-202ENST00000311550 RSPH4AQ5TD94 716 aa21.97■■□□□ 1.11
GABRB3-202ENST00000311550 PTMAP06454 111 aaKnown RBP21.97■■□□□ 1.11
GABRB3-202ENST00000311550 LMOD2Q6P5Q4 547 aa21.97■■□□□ 1.11
GABRB3-202ENST00000311550 ITPRIPQ8IWB1 547 aa21.97■■□□□ 1.11
GABRB3-202ENST00000311550 KIF7Q2M1P5 1343 aa21.95■■□□□ 1.11
GABRB3-202ENST00000311550 EIF3AQ14152 1382 aaKnown RBP21.95■■□□□ 1.1
GABRB3-202ENST00000311550 NAP1L5Q96NT1 182 aaPredicted RBP21.95■■□□□ 1.1
GABRB3-202ENST00000311550 CCDC7Q96M83 1385 aa21.94■■□□□ 1.1
GABRB3-202ENST00000311550 APBB1O00213 710 aa21.94■■□□□ 1.1
GABRB3-202ENST00000311550 WASHC2AQ641Q2 1341 aa21.94■■□□□ 1.1
GABRB3-202ENST00000311550 RRP1P56182 461 aaKnown RBP21.93■■□□□ 1.1
GABRB3-202ENST00000311550 HDGFL2Q7Z4V5 671 aaPredicted RBP21.93■■□□□ 1.1
GABRB3-202ENST00000311550 ERICH3Q5RHP9 1530 aa21.93■■□□□ 1.1
GABRB3-202ENST00000311550 RWDD1Q9H446 243 aaPredicted RBP21.93■■□□□ 1.1
GABRB3-202ENST00000311550 NCAPD3P42695 1498 aa21.93■■□□□ 1.1
GABRB3-202ENST00000311550 RRP7AQ9Y3A4 280 aaKnown RBP21.92■■□□□ 1.1
GABRB3-202ENST00000311550 TRAK1Q9UPV9 953 aa21.91■■□□□ 1.1
GABRB3-202ENST00000311550 NCOA2Q15596 1464 aa21.9■■□□□ 1.1
GABRB3-202ENST00000311550 CENPJQ9HC77 1338 aaPredicted RBP21.9■■□□□ 1.1
GABRB3-202ENST00000311550 IPO8O15397 1037 aaKnown RBP21.9■■□□□ 1.1
GABRB3-202ENST00000311550 CASKIN1Q8WXD9 1431 aa21.9■■□□□ 1.1
GABRB3-202ENST00000311550 SMC4Q9NTJ3 1288 aa21.89■■□□□ 1.09
GABRB3-202ENST00000311550 OS9Q13438 667 aaPredicted RBP21.88■■□□□ 1.09
GABRB3-202ENST00000311550 PDE4AP27815 886 aa21.88■■□□□ 1.09
GABRB3-202ENST00000311550 PRXQ9BXM0 1461 aa21.88■■□□□ 1.09
GABRB3-202ENST00000311550 CRBNQ96SW2 442 aa21.88■■□□□ 1.09
GABRB3-202ENST00000311550 GZF1Q9H116 711 aaPredicted RBP21.87■■□□□ 1.09
GABRB3-202ENST00000311550 CUX1P39880 1505 aa21.87■■□□□ 1.09
GABRB3-202ENST00000311550 CNTLNQ9NXG0 1405 aa21.86■■□□□ 1.09
GABRB3-202ENST00000311550 MFAP1P55081 439 aaKnown RBP21.85■■□□□ 1.09
GABRB3-202ENST00000311550 PLCB2Q00722 1185 aa21.85■■□□□ 1.09
GABRB3-202ENST00000311550 DNTTIP2Q5QJE6 756 aaKnown RBP21.85■■□□□ 1.09
GABRB3-202ENST00000311550 PMFBP1Q8TBY8 1022 aa21.85■■□□□ 1.09
GABRB3-202ENST00000311550 SLC4A3P48751 1232 aa21.85■■□□□ 1.09
GABRB3-202ENST00000311550 BCL2L13Q9BXK5 485 aa21.84■■□□□ 1.09
GABRB3-202ENST00000311550 PTPRGP23470 1445 aa21.82■■□□□ 1.08
GABRB3-202ENST00000311550 L1TD1Q5T7N2 865 aaKnown RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms