RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 IPO9Q96P70 1041 aaKnown RBP24.62■■□□□ 1.53
SPSB4-201ENST00000310546 FAM9BQ8IZU0 186 aa24.61■■□□□ 1.53
SPSB4-201ENST00000310546 KIAA0586Q9BVV6 1533 aa24.6■■□□□ 1.53
SPSB4-201ENST00000310546 CCDC184Q52MB2 194 aa24.6■■□□□ 1.53
SPSB4-201ENST00000310546 UGGT2Q9NYU1 1516 aa24.58■■□□□ 1.53
SPSB4-201ENST00000310546 CLASP1Q7Z460 1538 aa24.55■■□□□ 1.52
SPSB4-201ENST00000310546 OSCARQ8IYS5 282 aa24.54■■□□□ 1.52
SPSB4-201ENST00000310546 DISP1Q96F81 1524 aa24.52■■□□□ 1.52
SPSB4-201ENST00000310546 CHIC2Q9UKJ5 165 aa24.51■■□□□ 1.51
SPSB4-201ENST00000310546 HECW1Q76N89 1606 aa24.5■■□□□ 1.51
SPSB4-201ENST00000310546 MAGI3Q5TCQ9 1506 aa24.5■■□□□ 1.51
SPSB4-201ENST00000310546 KIAA0556O60303 1618 aa24.49■■□□□ 1.51
SPSB4-201ENST00000310546 FGD6Q6ZV73 1430 aa24.49■■□□□ 1.51
SPSB4-201ENST00000310546 NCOA2Q15596 1464 aa24.48■■□□□ 1.51
SPSB4-201ENST00000310546 CCDC18Q5T9S5 1454 aa24.47■■□□□ 1.51
SPSB4-201ENST00000310546 WASHC2AQ641Q2 1341 aa24.47■■□□□ 1.51
SPSB4-201ENST00000310546 EPRSP07814 1512 aaKnown RBP24.47■■□□□ 1.51
SPSB4-201ENST00000310546 CDK13Q14004 1512 aaKnown RBP24.46■■□□□ 1.51
SPSB4-201ENST00000310546 MRS2Q9HD23 443 aa24.46■■□□□ 1.51
SPSB4-201ENST00000310546 EHBP1L1Q8N3D4 1523 aa24.46■■□□□ 1.51
SPSB4-201ENST00000310546 SUPT6HQ7KZ85 1726 aaKnown RBP24.46■■□□□ 1.51
SPSB4-201ENST00000310546 SHROOM2Q13796 1616 aa24.44■■□□□ 1.5
SPSB4-201ENST00000310546 ZBED9Q6R2W3 1325 aa24.43■■□□□ 1.5
SPSB4-201ENST00000310546 NPM2Q86SE8 214 aaKnown RBP24.43■■□□□ 1.5
SPSB4-201ENST00000310546 LAS1LQ9Y4W2 734 aaKnown RBP24.41■■□□□ 1.5
SPSB4-201ENST00000310546 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.41■■□□□ 1.5
SPSB4-201ENST00000310546 MYOM3Q5VTT5 1437 aa24.4■■□□□ 1.5
SPSB4-201ENST00000310546 NEFMP07197 916 aa24.4■■□□□ 1.5
SPSB4-201ENST00000310546 HSPA5P11021 654 aaKnown RBP24.4■■□□□ 1.5
SPSB4-201ENST00000310546 PLB1Q6P1J6 1458 aa24.39■■□□□ 1.49
SPSB4-201ENST00000310546 UBE2Q2Q8WVN8 375 aa24.39■■□□□ 1.49
SPSB4-201ENST00000310546 ZNF777Q9ULD5 760 aaPredicted RBP24.38■■□□□ 1.49
SPSB4-201ENST00000310546 PRG4Q92954 1404 aaPredicted RBP24.38■■□□□ 1.49
SPSB4-201ENST00000310546 ERCC6L2Q5T890 1561 aa24.36■■□□□ 1.49
SPSB4-201ENST00000310546 RRP7BPQ9NSQ0 103 aa24.36■■□□□ 1.49
SPSB4-201ENST00000310546 ZNF644Q9H582 1327 aaPredicted RBP24.36■■□□□ 1.49
SPSB4-201ENST00000310546 PRKRIP1Q9H875 184 aaPredicted RBP24.35■■□□□ 1.49
SPSB4-201ENST00000310546 ARHGEF11O15085 1522 aa24.35■■□□□ 1.49
SPSB4-201ENST00000310546 AKNAQ7Z591 1439 aa24.35■■□□□ 1.49
SPSB4-201ENST00000310546 SENP3-EIF4A1A0A087X0R7 540 aa24.34■■□□□ 1.49
SPSB4-201ENST00000310546 NUP153P49790 1475 aaKnown RBP24.33■■□□□ 1.49
SPSB4-201ENST00000310546 EIF5BO60841 1220 aaKnown RBP24.33■■□□□ 1.49
SPSB4-201ENST00000310546 RAPGEF6Q8TEU7 1601 aa24.33■■□□□ 1.49
SPSB4-201ENST00000310546 PTPRKQ15262 1439 aa24.33■■□□□ 1.48
SPSB4-201ENST00000310546 PTPN23Q9H3S7 1636 aa24.3■■□□□ 1.48
SPSB4-201ENST00000310546 CARMIL2Q6F5E8 1435 aa24.29■■□□□ 1.48
SPSB4-201ENST00000310546 CNGB1Q14028 1251 aaPredicted RBP24.28■■□□□ 1.48
SPSB4-201ENST00000310546 EIF4G2P78344 907 aaKnown RBP eCLIP24.28■■□□□ 1.48
SPSB4-201ENST00000310546 CNTLNQ9NXG0 1405 aa24.26■■□□□ 1.47
SPSB4-201ENST00000310546 BRPF3Q9ULD4 1205 aa24.25■■□□□ 1.47
SPSB4-201ENST00000310546 USP35Q9P2H5 1018 aa24.24■■□□□ 1.47
SPSB4-201ENST00000310546 C11orf95C9JLR9 678 aaPredicted RBP24.23■■□□□ 1.47
SPSB4-201ENST00000310546 HFM1A2PYH4 1435 aa24.19■■□□□ 1.46
SPSB4-201ENST00000310546 NUDCQ9Y266 331 aa24.19■■□□□ 1.46
SPSB4-201ENST00000310546 PTPRGP23470 1445 aa24.18■■□□□ 1.46
SPSB4-201ENST00000310546 UACAQ9BZF9 1416 aa24.18■■□□□ 1.46
SPSB4-201ENST00000310546 WASHC2CQ9Y4E1 1318 aa24.18■■□□□ 1.46
SPSB4-201ENST00000310546 TCOF1Q13428 1488 aaKnown RBP24.18■■□□□ 1.46
SPSB4-201ENST00000310546 PLEKHD1A6NEE1 506 aa24.17■■□□□ 1.46
SPSB4-201ENST00000310546 SMG6Q86US8 1419 aaKnown RBP24.17■■□□□ 1.46
SPSB4-201ENST00000310546 NAIPQ13075 1403 aa24.15■■□□□ 1.46
SPSB4-201ENST00000310546 MIA2Q96PC5 1412 aa24.15■■□□□ 1.46
SPSB4-201ENST00000310546 CFDP1Q9UEE9 299 aaPredicted RBP24.14■■□□□ 1.46
SPSB4-201ENST00000310546 KDM5BQ9UGL1 1544 aa24.13■■□□□ 1.45
SPSB4-201ENST00000310546 PPM1GO15355 546 aaPredicted RBP24.13■■□□□ 1.45
SPSB4-201ENST00000310546 RIMBP3CA6NJZ7 1639 aa24.13■■□□□ 1.45
SPSB4-201ENST00000310546 RIMBP3BA6NNM3 1639 aa24.13■■□□□ 1.45
SPSB4-201ENST00000310546 RIMBP3Q9UFD9 1639 aa24.13■■□□□ 1.45
SPSB4-201ENST00000310546 CCDC7Q96M83 1385 aa24.12■■□□□ 1.45
SPSB4-201ENST00000310546 RNF123Q5XPI4 1314 aa24.11■■□□□ 1.45
SPSB4-201ENST00000310546 PDE4AP27815 886 aa24.11■■□□□ 1.45
SPSB4-201ENST00000310546 TROQ12816 1431 aaPredicted RBP24.09■■□□□ 1.45
SPSB4-201ENST00000310546 GSE1Q14687 1217 aa24.09■■□□□ 1.45
SPSB4-201ENST00000310546 FOXD1Q16676 465 aa24.09■■□□□ 1.45
SPSB4-201ENST00000310546 ABCA8O94911 1581 aa24.07■■□□□ 1.44
SPSB4-201ENST00000310546 KIF14Q15058 1648 aa24.06■■□□□ 1.44
SPSB4-201ENST00000310546 TCERG1O14776 1098 aaKnown RBP24.04■■□□□ 1.44
SPSB4-201ENST00000310546 NCOA1Q15788 1441 aa24.03■■□□□ 1.44
SPSB4-201ENST00000310546 ATP10BO94823 1461 aa24.02■■□□□ 1.44
SPSB4-201ENST00000310546 BACH2Q9BYV9 841 aa24.02■■□□□ 1.44
SPSB4-201ENST00000310546 L3MBTL2Q969R5 705 aa24.01■■□□□ 1.43
SPSB4-201ENST00000310546 POLR3GLQ9BT43 218 aa24■■□□□ 1.43
SPSB4-201ENST00000310546 GCC2Q8IWJ2 1684 aa24■■□□□ 1.43
SPSB4-201ENST00000310546 HNRNPMP52272 730 aaKnown RBP eCLIP24■■□□□ 1.43
SPSB4-201ENST00000310546 KDM6BO15054 1643 aa24■■□□□ 1.43
SPSB4-201ENST00000310546 KIF7Q2M1P5 1343 aa24■■□□□ 1.43
SPSB4-201ENST00000310546 EXOC6Q8TAG9 804 aa24■■□□□ 1.43
SPSB4-201ENST00000310546 DAPK1P53355 1430 aa23.99■■□□□ 1.43
SPSB4-201ENST00000310546 FRAT1Q92837 279 aaPredicted RBP23.98■■□□□ 1.43
SPSB4-201ENST00000310546 ADCY10Q96PN6 1610 aa23.98■■□□□ 1.43
SPSB4-201ENST00000310546 GPATCH8Q9UKJ3 1502 aaKnown RBP23.97■■□□□ 1.43
SPSB4-201ENST00000310546 ABCC5O15440 1437 aa23.97■■□□□ 1.43
SPSB4-201ENST00000310546 DNMT1P26358 1616 aaKnown RBP23.96■■□□□ 1.43
SPSB4-201ENST00000310546 NFKBIBQ15653 356 aa23.96■■□□□ 1.43
SPSB4-201ENST00000310546 ABCC2Q92887 1545 aa23.95■■□□□ 1.42
SPSB4-201ENST00000310546 ITSN2Q9NZM3 1697 aa23.95■■□□□ 1.42
SPSB4-201ENST00000310546 CYB5RLQ6IPT4 315 aa23.94■■□□□ 1.42
SPSB4-201ENST00000310546 SLC4A3P48751 1232 aa23.94■■□□□ 1.42
SPSB4-201ENST00000310546 CAMSAP2Q08AD1 1489 aa23.93■■□□□ 1.42
SPSB4-201ENST00000310546 DNAJC5Q9H3Z4 198 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms