RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.63■□□□□ 0.57
VPS26B-201ENST00000281187 CDCA7LQ96GN5 454 aa18.63■□□□□ 0.57
VPS26B-201ENST00000281187 FBLN2P98095 1184 aa18.62■□□□□ 0.57
VPS26B-201ENST00000281187 CRBNQ96SW2 442 aa18.62■□□□□ 0.57
VPS26B-201ENST00000281187 NFKBIBQ15653 356 aa18.62■□□□□ 0.57
VPS26B-201ENST00000281187 SLKQ9H2G2 1235 aaPredicted RBP18.62■□□□□ 0.57
VPS26B-201ENST00000281187 ST20-MTHFSA0A0A6YYL1 179 aa18.61■□□□□ 0.57
VPS26B-201ENST00000281187 HFM1A2PYH4 1435 aa18.6■□□□□ 0.57
VPS26B-201ENST00000281187 FRAT1Q92837 279 aaPredicted RBP18.6■□□□□ 0.57
VPS26B-201ENST00000281187 NAIPQ13075 1403 aa18.59■□□□□ 0.57
VPS26B-201ENST00000281187 CFDP1Q9UEE9 299 aaPredicted RBP18.59■□□□□ 0.57
VPS26B-201ENST00000281187 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.59■□□□□ 0.57
VPS26B-201ENST00000281187 USP47Q96K76 1375 aa18.59■□□□□ 0.57
VPS26B-201ENST00000281187 SPRYD3Q8NCJ5 442 aa18.59■□□□□ 0.57
VPS26B-201ENST00000281187 BACH2Q9BYV9 841 aa18.59■□□□□ 0.57
VPS26B-201ENST00000281187 TDRD9Q8NDG6 1382 aaKnown RBP18.59■□□□□ 0.57
VPS26B-201ENST00000281187 SMG6Q86US8 1419 aaKnown RBP18.58■□□□□ 0.56
VPS26B-201ENST00000281187 PNISRQ8TF01 805 aaKnown RBP18.57■□□□□ 0.56
VPS26B-201ENST00000281187 AQRO60306 1485 aaKnown RBP eCLIP18.56■□□□□ 0.562e-9■■■■■ 39.4
VPS26B-201ENST00000281187 PTPRKQ15262 1439 aa18.56■□□□□ 0.56
VPS26B-201ENST00000281187 NAP1L5Q96NT1 182 aaPredicted RBP18.56■□□□□ 0.56
VPS26B-201ENST00000281187 MYOM3Q5VTT5 1437 aa18.55■□□□□ 0.56
VPS26B-201ENST00000281187 ZNF644Q9H582 1327 aaPredicted RBP18.55■□□□□ 0.56
VPS26B-201ENST00000281187 UPF2Q9HAU5 1272 aaKnown RBP18.55■□□□□ 0.56
VPS26B-201ENST00000281187 FGD5Q6ZNL6 1462 aa18.55■□□□□ 0.56
VPS26B-201ENST00000281187 CFTRP13569 1480 aa18.54■□□□□ 0.56
VPS26B-201ENST00000281187 PCF11O94913 1555 aaKnown RBP18.53■□□□□ 0.56
VPS26B-201ENST00000281187 NCOA2Q15596 1464 aa18.53■□□□□ 0.56
VPS26B-201ENST00000281187 GZF1Q9H116 711 aaPredicted RBP18.53■□□□□ 0.56
VPS26B-201ENST00000281187 ARID4BQ4LE39 1312 aaPredicted RBP18.53■□□□□ 0.56
VPS26B-201ENST00000281187 FRAT2O75474 233 aaPredicted RBP18.52■□□□□ 0.56
VPS26B-201ENST00000281187 CASKIN1Q8WXD9 1431 aa18.52■□□□□ 0.55
VPS26B-201ENST00000281187 MYBBP1AQ9BQG0 1328 aaKnown RBP18.52■□□□□ 0.55
VPS26B-201ENST00000281187 MS4A1P11836 297 aa18.51■□□□□ 0.55
VPS26B-201ENST00000281187 NLRP13Q86W25 1043 aa18.51■□□□□ 0.55
VPS26B-201ENST00000281187 RALBP1Q15311 655 aa18.51■□□□□ 0.55
VPS26B-201ENST00000281187 GLIPR1L2Q4G1C9 344 aa18.51■□□□□ 0.55
VPS26B-201ENST00000281187 TSPY4P0CV99 314 aa18.5■□□□□ 0.55
VPS26B-201ENST00000281187 TSPY10P0CW01 314 aa18.5■□□□□ 0.55
VPS26B-201ENST00000281187 RAD54L2Q9Y4B4 1467 aa18.5■□□□□ 0.55
VPS26B-201ENST00000281187 NEUROD2Q15784 382 aa18.5■□□□□ 0.55
VPS26B-201ENST00000281187 BECN1Q14457 450 aa18.49■□□□□ 0.55
VPS26B-201ENST00000281187 KTN1Q86UP2 1357 aaKnown RBP18.49■□□□□ 0.55
VPS26B-201ENST00000281187 KIF15Q9NS87 1388 aa18.47■□□□□ 0.55
VPS26B-201ENST00000281187 NCOA1Q15788 1441 aa18.47■□□□□ 0.55
VPS26B-201ENST00000281187 FYCO1Q9BQS8 1478 aa18.46■□□□□ 0.55
VPS26B-201ENST00000281187 CADPSQ9ULU8 1353 aa18.45■□□□□ 0.54
VPS26B-201ENST00000281187 PDE3BQ13370 1112 aa18.44■□□□□ 0.54
VPS26B-201ENST00000281187 FAM161AQ3B820 660 aa18.44■□□□□ 0.54
VPS26B-201ENST00000281187 KNSTRNQ9Y448 316 aa18.44■□□□□ 0.54
VPS26B-201ENST00000281187 MAP3K1Q13233 1512 aa18.42■□□□□ 0.54
VPS26B-201ENST00000281187 ROCK2O75116 1388 aaKnown RBP18.42■□□□□ 0.54
VPS26B-201ENST00000281187 CCDC146Q8IYE0 955 aa18.42■□□□□ 0.54
VPS26B-201ENST00000281187 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.41■□□□□ 0.54
VPS26B-201ENST00000281187 BICRAQ9NZM4 1560 aa18.41■□□□□ 0.54
VPS26B-201ENST00000281187 HSP90AA1P07900 732 aaKnown RBP18.41■□□□□ 0.54
VPS26B-201ENST00000281187 C20orf194Q5TEA3 1177 aa18.41■□□□□ 0.54
VPS26B-201ENST00000281187 NUP155O75694 1391 aa18.4■□□□□ 0.54
VPS26B-201ENST00000281187 PTPN23Q9H3S7 1636 aa18.39■□□□□ 0.54
VPS26B-201ENST00000281187 BIVM-ERCC5R4GMW8 1640 aa18.39■□□□□ 0.54
VPS26B-201ENST00000281187 UNC13AQ9UPW8 1703 aa18.39■□□□□ 0.53
VPS26B-201ENST00000281187 CENPQQ7L2Z9 268 aaPredicted RBP18.37■□□□□ 0.53
VPS26B-201ENST00000281187 PANK3Q9H999 370 aa18.37■□□□□ 0.53
VPS26B-201ENST00000281187 PEG3Q9GZU2 1588 aa18.36■□□□□ 0.53
VPS26B-201ENST00000281187 TNNT2P45379 298 aaPredicted RBP18.35■□□□□ 0.53
VPS26B-201ENST00000281187 RSPH6AQ9H0K4 717 aa18.35■□□□□ 0.53
VPS26B-201ENST00000281187 PNNQ9H307 717 aaKnown RBP18.35■□□□□ 0.53
VPS26B-201ENST00000281187 GOLGA2Q08379 1002 aa18.33■□□□□ 0.53
VPS26B-201ENST00000281187 TRIM44Q96DX7 344 aaPredicted RBP18.33■□□□□ 0.53
VPS26B-201ENST00000281187 BRD4O60885 1362 aaPredicted RBP18.32■□□□□ 0.52
VPS26B-201ENST00000281187 ANKRD30BQ9BXX2 1392 aa18.31■□□□□ 0.52
VPS26B-201ENST00000281187 TMF1P82094 1093 aa18.31■□□□□ 0.52
VPS26B-201ENST00000281187 L1TD1Q5T7N2 865 aaKnown RBP18.31■□□□□ 0.52
VPS26B-201ENST00000281187 VSIG10Q8N0Z9 540 aa18.31■□□□□ 0.52
VPS26B-201ENST00000281187 ADAMTS8Q9UP79 889 aa18.3■□□□□ 0.52
VPS26B-201ENST00000281187 POGKQ9P215 609 aa18.3■□□□□ 0.52
VPS26B-201ENST00000281187 CLUAP1Q96AJ1 413 aa18.29■□□□□ 0.52
VPS26B-201ENST00000281187 NCAPD3P42695 1498 aa18.28■□□□□ 0.52
VPS26B-201ENST00000281187 FANCD2Q9BXW9 1451 aa18.27■□□□□ 0.52
VPS26B-201ENST00000281187 PLEKHD1A6NEE1 506 aa18.27■□□□□ 0.52
VPS26B-201ENST00000281187 COG6Q9Y2V7 657 aa18.27■□□□□ 0.52
VPS26B-201ENST00000281187 GOLGA6L3A6NEY3 463 aa18.26■□□□□ 0.51
VPS26B-201ENST00000281187 BCL2L13Q9BXK5 485 aa18.26■□□□□ 0.51
VPS26B-201ENST00000281187 NBPF1Q3BBV0 1214 aa18.25■□□□□ 0.51
VPS26B-201ENST00000281187 RNF123Q5XPI4 1314 aa18.25■□□□□ 0.51
VPS26B-201ENST00000281187 ANP32BQ92688 251 aaKnown RBP18.25■□□□□ 0.51
VPS26B-201ENST00000281187 SENP3Q9H4L4 574 aaPredicted RBP18.25■□□□□ 0.51
VPS26B-201ENST00000281187 APAF1O14727 1248 aa18.24■□□□□ 0.51
VPS26B-201ENST00000281187 WASHC2CQ9Y4E1 1318 aa18.23■□□□□ 0.51
VPS26B-201ENST00000281187 DHX29Q7Z478 1369 aaKnown RBP18.23■□□□□ 0.51
VPS26B-201ENST00000281187 HNRNPMP52272 730 aaKnown RBP eCLIP18.22■□□□□ 0.511e-6■■■■□ 22.8
VPS26B-201ENST00000281187 UBE2Q2Q8WVN8 375 aa18.22■□□□□ 0.51
VPS26B-201ENST00000281187 ANKRD30AQ9BXX3 1397 aa18.22■□□□□ 0.51
VPS26B-201ENST00000281187 MFAP1P55081 439 aaKnown RBP18.21■□□□□ 0.51
VPS26B-201ENST00000281187 RPRD2Q5VT52 1461 aaKnown RBP18.21■□□□□ 0.51
VPS26B-201ENST00000281187 FAM43AQ8N2R8 423 aa18.21■□□□□ 0.51
VPS26B-201ENST00000281187 EFCAB5A4FU69 1503 aa18.2■□□□□ 0.5
VPS26B-201ENST00000281187 BCAR3O75815 825 aa18.2■□□□□ 0.5
VPS26B-201ENST00000281187 CHGAP10645 457 aaKnown RBP18.2■□□□□ 0.5
VPS26B-201ENST00000281187 HSP90AA2PQ14568 343 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms