RNA–Protein interactions for RNA: ENST00000264263.9

GFM1-201, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5 BASIC

Gene GFM1, Length 3,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-201ENST00000264263 CARD11Q9BXL7 1154 aa15.4■□□□□ 0.06
GFM1-201ENST00000264263 BRPF3Q9ULD4 1205 aa15.39■□□□□ 0.05
GFM1-201ENST00000264263 CASKIN1Q8WXD9 1431 aa15.39■□□□□ 0.05
GFM1-201ENST00000264263 NCAPD3P42695 1498 aa15.38■□□□□ 0.05
GFM1-201ENST00000264263 FBLN2P98095 1184 aa15.38■□□□□ 0.05
GFM1-201ENST00000264263 CC2D1BQ5T0F9 858 aaKnown RBP15.38■□□□□ 0.05
GFM1-201ENST00000264263 MYOM3Q5VTT5 1437 aa15.37■□□□□ 0.05
GFM1-201ENST00000264263 PKD2Q13563 968 aa15.37■□□□□ 0.05
GFM1-201ENST00000264263 CDCA7LQ96GN5 454 aa15.37■□□□□ 0.05
GFM1-201ENST00000264263 PDE4AP27815 886 aa15.34■□□□□ 0.05
GFM1-201ENST00000264263 ST20-MTHFSA0A0A6YYL1 179 aa15.34■□□□□ 0.05
GFM1-201ENST00000264263 RCAN3Q9UKA8 241 aa15.34■□□□□ 0.05
GFM1-201ENST00000264263 DCAF11Q8TEB1 546 aa15.33■□□□□ 0.05
GFM1-201ENST00000264263 FYCO1Q9BQS8 1478 aa15.33■□□□□ 0.04
GFM1-201ENST00000264263 PTPN23Q9H3S7 1636 aa15.32■□□□□ 0.04
GFM1-201ENST00000264263 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.31■□□□□ 0.045e-6■□□□□ 8.1
GFM1-201ENST00000264263 RGS3P49796 1198 aa15.31■□□□□ 0.04
GFM1-201ENST00000264263 FANCD2Q9BXW9 1451 aa15.31■□□□□ 0.04
GFM1-201ENST00000264263 MAP3K1Q13233 1512 aa15.31■□□□□ 0.04
GFM1-201ENST00000264263 NESP48681 1621 aa15.3■□□□□ 0.04
GFM1-201ENST00000264263 CFDP1Q9UEE9 299 aaPredicted RBP15.3■□□□□ 0.04
GFM1-201ENST00000264263 USP47Q96K76 1375 aa15.3■□□□□ 0.04
GFM1-201ENST00000264263 PNISRQ8TF01 805 aaKnown RBP15.3■□□□□ 0.04
GFM1-201ENST00000264263 RRP1P56182 461 aaKnown RBP15.29■□□□□ 0.04
GFM1-201ENST00000264263 NCOA1Q15788 1441 aa15.28■□□□□ 0.04
GFM1-201ENST00000264263 DNAJC5BQ9UF47 199 aa15.26■□□□□ 0.03
GFM1-201ENST00000264263 CRBNQ96SW2 442 aa15.25■□□□□ 0.03
GFM1-201ENST00000264263 SMG6Q86US8 1419 aaKnown RBP15.23■□□□□ 0.03
GFM1-201ENST00000264263 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.23■□□□□ 0.03
GFM1-201ENST00000264263 POLA1P09884 1462 aaPredicted RBP15.23■□□□□ 0.03
GFM1-201ENST00000264263 KDM6BO15054 1643 aa15.21■□□□□ 0.03
GFM1-201ENST00000264263 CDK13Q14004 1512 aaKnown RBP15.21■□□□□ 0.02
GFM1-201ENST00000264263 TCERG1O14776 1098 aaKnown RBP15.2■□□□□ 0.02
GFM1-201ENST00000264263 C20orf194Q5TEA3 1177 aa15.2■□□□□ 0.02
GFM1-201ENST00000264263 ANKRD30BQ9BXX2 1392 aa15.2■□□□□ 0.02
GFM1-201ENST00000264263 CFAP43Q8NDM7 1665 aa15.18■□□□□ 0.02
GFM1-201ENST00000264263 PPM1GO15355 546 aaPredicted RBP15.18■□□□□ 0.02
GFM1-201ENST00000264263 HMGXB3Q12766 1538 aa15.18■□□□□ 0.02
GFM1-201ENST00000264263 KDM5BQ9UGL1 1544 aa15.18■□□□□ 0.02
GFM1-201ENST00000264263 BACH2Q9BYV9 841 aa15.18■□□□□ 0.02
GFM1-201ENST00000264263 DENND4BO75064 1496 aaPredicted RBP15.17■□□□□ 0.02
GFM1-201ENST00000264263 NUP155O75694 1391 aa15.17■□□□□ 0.02
GFM1-201ENST00000264263 FRAT1Q92837 279 aaPredicted RBP15.16■□□□□ 0.02
GFM1-201ENST00000264263 SNAPC4Q5SXM2 1469 aa15.16■□□□□ 0.02
GFM1-201ENST00000264263 GSE1Q14687 1217 aa15.15■□□□□ 0.02
GFM1-201ENST00000264263 PDS5BQ9NTI5 1447 aa15.15■□□□□ 0.02
GFM1-201ENST00000264263 MYBBP1AQ9BQG0 1328 aaKnown RBP15.15■□□□□ 0.02
GFM1-201ENST00000264263 NBPF1Q3BBV0 1214 aa15.15■□□□□ 0.02
GFM1-201ENST00000264263 DHX29Q7Z478 1369 aaKnown RBP15.15■□□□□ 0.02
GFM1-201ENST00000264263 ARID4BQ4LE39 1312 aaPredicted RBP15.15■□□□□ 0.02
GFM1-201ENST00000264263 TOPBP1Q92547 1522 aa15.14■□□□□ 0.01
GFM1-201ENST00000264263 NFKBIBQ15653 356 aa15.13■□□□□ 0.01
GFM1-201ENST00000264263 CCDC146Q8IYE0 955 aa15.13■□□□□ 0.01
GFM1-201ENST00000264263 SPRYD3Q8NCJ5 442 aa15.13■□□□□ 0.01
GFM1-201ENST00000264263 TSPY4P0CV99 314 aa15.12■□□□□ 0.01
GFM1-201ENST00000264263 TSPY10P0CW01 314 aa15.12■□□□□ 0.01
GFM1-201ENST00000264263 HNRNPMP52272 730 aaKnown RBP eCLIP15.12■□□□□ 0.01
GFM1-201ENST00000264263 MAGI3Q5TCQ9 1506 aa15.12■□□□□ 0.01
GFM1-201ENST00000264263 EFCAB5A4FU69 1503 aa15.12■□□□□ 0.01
GFM1-201ENST00000264263 NEUROD2Q15784 382 aa15.12■□□□□ 0.01
GFM1-201ENST00000264263 SENP3Q9H4L4 574 aaPredicted RBP15.12■□□□□ 0.01
GFM1-201ENST00000264263 ROCK2O75116 1388 aaKnown RBP15.12■□□□□ 0.01
GFM1-201ENST00000264263 GAPVD1Q14C86 1478 aa15.12■□□□□ 0.01
GFM1-201ENST00000264263 PANK3Q9H999 370 aa15.11■□□□□ 0.01
GFM1-201ENST00000264263 NLRP13Q86W25 1043 aa15.11■□□□□ 0.01
GFM1-201ENST00000264263 KIF15Q9NS87 1388 aa15.11■□□□□ 0.01
GFM1-201ENST00000264263 SLKQ9H2G2 1235 aaPredicted RBP15.11■□□□□ 0.01
GFM1-201ENST00000264263 CANXP27824 592 aaKnown RBP15.1■□□□□ 0.01
GFM1-201ENST00000264263 WDR43Q15061 677 aaKnown RBP eCLIP15.1■□□□□ 0.01
GFM1-201ENST00000264263 RPRD2Q5VT52 1461 aaKnown RBP15.1■□□□□ 0.01
GFM1-201ENST00000264263 FRAT2O75474 233 aaPredicted RBP15.09■□□□□ 0.01
GFM1-201ENST00000264263 RALBP1Q15311 655 aa15.09■□□□□ 0.01
GFM1-201ENST00000264263 SUPT6HQ7KZ85 1726 aaKnown RBP15.09■□□□□ 0.01
GFM1-201ENST00000264263 KTN1Q86UP2 1357 aaKnown RBP15.09■□□□□ 0.01
GFM1-201ENST00000264263 DDRGK1Q96HY6 314 aa15.08■□□□□ 0
GFM1-201ENST00000264263 ADAMTS8Q9UP79 889 aa15.07■□□□□ 0
GFM1-201ENST00000264263 DAPK1P53355 1430 aa15.07■□□□□ 0
GFM1-201ENST00000264263 GRIN2BQ13224 1484 aa15.07■□□□□ 0
GFM1-201ENST00000264263 ABCA10Q8WWZ4 1543 aa15.07■□□□□ 0
GFM1-201ENST00000264263 ABCC5O15440 1437 aa15.07■□□□□ 0
GFM1-201ENST00000264263 EHBP1L1Q8N3D4 1523 aa15.06■□□□□ 0
GFM1-201ENST00000264263 TNNT2P45379 298 aaPredicted RBP15.06■□□□□ 0
GFM1-201ENST00000264263 RNF123Q5XPI4 1314 aa15.05■□□□□ 0
GFM1-201ENST00000264263 UBE2Q2Q8WVN8 375 aa15.05■□□□□ 0
GFM1-201ENST00000264263 SPATA31E1Q6ZUB1 1445 aa15.05■□□□□ -0
GFM1-201ENST00000264263 EPRSP07814 1512 aaKnown RBP15.05■□□□□ -0
GFM1-201ENST00000264263 PRG4Q92954 1404 aaPredicted RBP15.04■□□□□ -0
GFM1-201ENST00000264263 NAP1L5Q96NT1 182 aaPredicted RBP15.04■□□□□ -0
GFM1-201ENST00000264263 UGGT2Q9NYU1 1516 aa15.04■□□□□ -0
GFM1-201ENST00000264263 USP35Q9P2H5 1018 aa15.04■□□□□ -0
GFM1-201ENST00000264263 CHMP7Q8WUX9 453 aaPredicted RBP15.02■□□□□ -0
GFM1-201ENST00000264263 THOC2Q8NI27 1593 aaKnown RBP15.02■□□□□ -0
GFM1-201ENST00000264263 PLEKHD1A6NEE1 506 aa15.02□□□□□ -0.01
GFM1-201ENST00000264263 TEX14Q8IWB6 1497 aa15.02□□□□□ -0.01
GFM1-201ENST00000264263 VSIG10Q8N0Z9 540 aa15.01□□□□□ -0.01
GFM1-201ENST00000264263 GZF1Q9H116 711 aaPredicted RBP15.01□□□□□ -0.01
GFM1-201ENST00000264263 KNSTRNQ9Y448 316 aa15.01□□□□□ -0.01
GFM1-201ENST00000264263 MS4A1P11836 297 aa15□□□□□ -0.01
GFM1-201ENST00000264263 BRD4O60885 1362 aaPredicted RBP15□□□□□ -0.01
GFM1-201ENST00000264263 BCAR3O75815 825 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms