RNA–Protein interactions for RNA: ENST00000261024.6

SLC40A1-201, Transcript of solute carrier family 40 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC40A1, Length 3,442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-201ENST00000261024 PCF11O94913 1555 aaKnown RBP19.74■□□□□ 0.75
SLC40A1-201ENST00000261024 ATAD2BQ9ULI0 1458 aa19.74■□□□□ 0.75
SLC40A1-201ENST00000261024 RCAN3Q9UKA8 241 aa19.73■□□□□ 0.75
SLC40A1-201ENST00000261024 UNC13AQ9UPW8 1703 aa19.72■□□□□ 0.75
SLC40A1-201ENST00000261024 NAIPQ13075 1403 aa19.72■□□□□ 0.75
SLC40A1-201ENST00000261024 FMN1Q68DA7 1419 aa19.72■□□□□ 0.75
SLC40A1-201ENST00000261024 PTPN23Q9H3S7 1636 aa19.72■□□□□ 0.75
SLC40A1-201ENST00000261024 CUX1P39880 1505 aa19.71■□□□□ 0.75
SLC40A1-201ENST00000261024 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.71■□□□□ 0.75
SLC40A1-201ENST00000261024 FHOD3Q2V2M9 1422 aa19.7■□□□□ 0.74
SLC40A1-201ENST00000261024 NBPF8Q3BBV2 869 aa19.7■□□□□ 0.74
SLC40A1-201ENST00000261024 PLIN1O60240 522 aa19.69■□□□□ 0.74
SLC40A1-201ENST00000261024 ARXQ96QS3 562 aa19.69■□□□□ 0.74
SLC40A1-201ENST00000261024 MTUS2Q5JR59 1369 aa19.68■□□□□ 0.74
SLC40A1-201ENST00000261024 PNISRQ8TF01 805 aaKnown RBP19.68■□□□□ 0.74
SLC40A1-201ENST00000261024 ZMYND15Q9H091 742 aa19.67■□□□□ 0.74
SLC40A1-201ENST00000261024 CFAP43Q8NDM7 1665 aa19.67■□□□□ 0.74
SLC40A1-201ENST00000261024 IGF1RP08069 1367 aa19.67■□□□□ 0.74
SLC40A1-201ENST00000261024 CARMIL1Q5VZK9 1371 aa19.67■□□□□ 0.74
SLC40A1-201ENST00000261024 ZNF326Q5BKZ1 582 aaKnown RBP19.66■□□□□ 0.74
SLC40A1-201ENST00000261024 MPHOSPH9Q99550 1183 aa19.63■□□□□ 0.73
SLC40A1-201ENST00000261024 NAP1L5Q96NT1 182 aaPredicted RBP19.62■□□□□ 0.73
SLC40A1-201ENST00000261024 RRAGDQ9NQL2 400 aaPredicted RBP19.61■□□□□ 0.73
SLC40A1-201ENST00000261024 DHX29Q7Z478 1369 aaKnown RBP19.59■□□□□ 0.73
SLC40A1-201ENST00000261024 CRBNQ96SW2 442 aa19.58■□□□□ 0.73
SLC40A1-201ENST00000261024 POGKQ9P215 609 aa19.57■□□□□ 0.72
SLC40A1-201ENST00000261024 CDCA7LQ96GN5 454 aa19.56■□□□□ 0.72
SLC40A1-201ENST00000261024 HSP90AA2PQ14568 343 aaPredicted RBP19.55■□□□□ 0.72
SLC40A1-201ENST00000261024 FYCO1Q9BQS8 1478 aa19.54■□□□□ 0.72
SLC40A1-201ENST00000261024 DENND4BO75064 1496 aaPredicted RBP19.53■□□□□ 0.72
SLC40A1-201ENST00000261024 RGS3P49796 1198 aa19.53■□□□□ 0.72
SLC40A1-201ENST00000261024 CASKIN1Q8WXD9 1431 aa19.52■□□□□ 0.71
SLC40A1-201ENST00000261024 SPATA31E1Q6ZUB1 1445 aa19.51■□□□□ 0.71
SLC40A1-201ENST00000261024 FAM161AQ3B820 660 aa19.5■□□□□ 0.71
SLC40A1-201ENST00000261024 PNNQ9H307 717 aaKnown RBP19.5■□□□□ 0.71
SLC40A1-201ENST00000261024 HSP90AA1P07900 732 aaKnown RBP19.49■□□□□ 0.71
SLC40A1-201ENST00000261024 MYOM3Q5VTT5 1437 aa19.49■□□□□ 0.71
SLC40A1-201ENST00000261024 SLKQ9H2G2 1235 aaPredicted RBP19.48■□□□□ 0.71
SLC40A1-201ENST00000261024 C20orf194Q5TEA3 1177 aa19.47■□□□□ 0.71
SLC40A1-201ENST00000261024 C8orf34Q49A92 452 aa19.46■□□□□ 0.71
SLC40A1-201ENST00000261024 FGD5Q6ZNL6 1462 aa19.46■□□□□ 0.71
SLC40A1-201ENST00000261024 USP47Q96K76 1375 aa19.45■□□□□ 0.7
SLC40A1-201ENST00000261024 ARID4BQ4LE39 1312 aaPredicted RBP19.45■□□□□ 0.7
SLC40A1-201ENST00000261024 SLC4A1APQ9BWU0 796 aaKnown RBP19.45■□□□□ 0.7
SLC40A1-201ENST00000261024 BICRAQ9NZM4 1560 aa19.45■□□□□ 0.7
SLC40A1-201ENST00000261024 L1TD1Q5T7N2 865 aaKnown RBP19.44■□□□□ 0.7
SLC40A1-201ENST00000261024 ABCA5Q8WWZ7 1642 aa19.44■□□□□ 0.7
SLC40A1-201ENST00000261024 MYBBP1AQ9BQG0 1328 aaKnown RBP19.43■□□□□ 0.7
SLC40A1-201ENST00000261024 LRPPRCP42704 1394 aaKnown RBP19.42■□□□□ 0.7
SLC40A1-201ENST00000261024 KTN1Q86UP2 1357 aaKnown RBP19.42■□□□□ 0.7
SLC40A1-201ENST00000261024 CFTRP13569 1480 aa19.42■□□□□ 0.7
SLC40A1-201ENST00000261024 KDM6BO15054 1643 aa19.41■□□□□ 0.7
SLC40A1-201ENST00000261024 PDE3BQ13370 1112 aa19.41■□□□□ 0.7
SLC40A1-201ENST00000261024 HECW1Q76N89 1606 aa19.41■□□□□ 0.7
SLC40A1-201ENST00000261024 KIF15Q9NS87 1388 aa19.4■□□□□ 0.7
SLC40A1-201ENST00000261024 RRP9O43818 475 aaKnown RBP19.39■□□□□ 0.7
SLC40A1-201ENST00000261024 CENPQQ7L2Z9 268 aaPredicted RBP19.39■□□□□ 0.69
SLC40A1-201ENST00000261024 RPRD2Q5VT52 1461 aaKnown RBP19.39■□□□□ 0.69
SLC40A1-201ENST00000261024 GZF1Q9H116 711 aaPredicted RBP19.39■□□□□ 0.69
SLC40A1-201ENST00000261024 BRD4O60885 1362 aaPredicted RBP19.39■□□□□ 0.69
SLC40A1-201ENST00000261024 ANKRD30BQ9BXX2 1392 aa19.39■□□□□ 0.69
SLC40A1-201ENST00000261024 TEX14Q8IWB6 1497 aa19.38■□□□□ 0.69
SLC40A1-201ENST00000261024 MIA2Q96PC5 1412 aa19.38■□□□□ 0.69
SLC40A1-201ENST00000261024 PODXL2Q9NZ53 605 aa19.37■□□□□ 0.69
SLC40A1-201ENST00000261024 POLR1AO95602 1720 aaPredicted RBP19.37■□□□□ 0.69
SLC40A1-201ENST00000261024 PANK2Q9BZ23 570 aa19.35■□□□□ 0.69
SLC40A1-201ENST00000261024 KDM2BQ8NHM5 1336 aa19.35■□□□□ 0.69
SLC40A1-201ENST00000261024 RALBP1Q15311 655 aa19.35■□□□□ 0.69
SLC40A1-201ENST00000261024 ARID3CA6NKF2 412 aa19.34■□□□□ 0.69
SLC40A1-201ENST00000261024 BCORL1Q5H9F3 1711 aa19.34■□□□□ 0.69
SLC40A1-201ENST00000261024 PLEKHG5O94827 1062 aa19.34■□□□□ 0.69
SLC40A1-201ENST00000261024 GOLGA6L3A6NEY3 463 aa19.33■□□□□ 0.69
SLC40A1-201ENST00000261024 XRCC6P12956 609 aaKnown RBP eCLIP19.33■□□□□ 0.68
SLC40A1-201ENST00000261024 CARD11Q9BXL7 1154 aa19.32■□□□□ 0.68
SLC40A1-201ENST00000261024 NLRP13Q86W25 1043 aa19.32■□□□□ 0.68
SLC40A1-201ENST00000261024 CLCN1P35523 988 aa19.31■□□□□ 0.68
SLC40A1-201ENST00000261024 ROCK2O75116 1388 aaKnown RBP19.3■□□□□ 0.68
SLC40A1-201ENST00000261024 BECN1Q14457 450 aa19.3■□□□□ 0.68
SLC40A1-201ENST00000261024 SPRYD3Q8NCJ5 442 aa19.29■□□□□ 0.68
SLC40A1-201ENST00000261024 EFCAB5A4FU69 1503 aa19.29■□□□□ 0.68
SLC40A1-201ENST00000261024 SNAPC4Q5SXM2 1469 aa19.28■□□□□ 0.68
SLC40A1-201ENST00000261024 ST20-MTHFSA0A0A6YYL1 179 aa19.28■□□□□ 0.68
SLC40A1-201ENST00000261024 SUPT6HQ7KZ85 1726 aaKnown RBP19.28■□□□□ 0.68
SLC40A1-201ENST00000261024 GCC2Q8IWJ2 1684 aa19.27■□□□□ 0.68
SLC40A1-201ENST00000261024 CC2D1BQ5T0F9 858 aaKnown RBP19.27■□□□□ 0.68
SLC40A1-201ENST00000261024 KDM2AQ9Y2K7 1162 aa19.27■□□□□ 0.68
SLC40A1-201ENST00000261024 SEC24BO95487 1268 aa19.24■□□□□ 0.67
SLC40A1-201ENST00000261024 EHBP1L1Q8N3D4 1523 aa19.2■□□□□ 0.66
SLC40A1-201ENST00000261024 USP19O94966 1318 aa19.19■□□□□ 0.66
SLC40A1-201ENST00000261024 UGGT2Q9NYU1 1516 aa19.19■□□□□ 0.66
SLC40A1-201ENST00000261024 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.19■□□□□ 0.66
SLC40A1-201ENST00000261024 MYH16Q9H6N6 1097 aa19.18■□□□□ 0.66
SLC40A1-201ENST00000261024 ESPNB1AK53 854 aa19.17■□□□□ 0.66
SLC40A1-201ENST00000261024 TRIM44Q96DX7 344 aaPredicted RBP19.17■□□□□ 0.66
SLC40A1-201ENST00000261024 LRRIQ1Q96JM4 1722 aa19.16■□□□□ 0.66
SLC40A1-201ENST00000261024 KDM5CP41229 1560 aa19.15■□□□□ 0.66
SLC40A1-201ENST00000261024 A0A0U1RQG5 324 aaPredicted RBP19.15■□□□□ 0.66
SLC40A1-201ENST00000261024 FSD2A1L4K1 749 aa19.14■□□□□ 0.65
SLC40A1-201ENST00000261024 PKD2Q13563 968 aa19.14■□□□□ 0.65
SLC40A1-201ENST00000261024 MAGI3Q5TCQ9 1506 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms