RNA–Protein interactions for RNA: ENST00000260926.9

SATB2-201, Transcript of SATB homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB2, Length 5,318 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-201ENST00000260926 L1TD1Q5T7N2 865 aaKnown RBP17.45■□□□□ 0.38
SATB2-201ENST00000260926 GGT6Q6P531 493 aa17.44■□□□□ 0.38
SATB2-201ENST00000260926 APPP05067 770 aa17.43■□□□□ 0.38
SATB2-201ENST00000260926 CARMIL2Q6F5E8 1435 aa17.43■□□□□ 0.38
SATB2-201ENST00000260926 SAFB2Q14151 953 aaKnown RBP eCLIP17.42■□□□□ 0.38
SATB2-201ENST00000260926 POGKQ9P215 609 aa17.41■□□□□ 0.38
SATB2-201ENST00000260926 HNRNPMP52272 730 aaKnown RBP eCLIP17.41■□□□□ 0.38
SATB2-201ENST00000260926 NUP155O75694 1391 aa17.4■□□□□ 0.38
SATB2-201ENST00000260926 CFAP53Q96M91 514 aa17.4■□□□□ 0.38
SATB2-201ENST00000260926 FANCD2Q9BXW9 1451 aa17.39■□□□□ 0.38
SATB2-201ENST00000260926 JPH4Q96JJ6 628 aa17.39■□□□□ 0.37
SATB2-201ENST00000260926 RSPH6AQ9H0K4 717 aa17.39■□□□□ 0.37
SATB2-201ENST00000260926 L3MBTL2Q969R5 705 aa17.38■□□□□ 0.37
SATB2-201ENST00000260926 TMF1P82094 1093 aa17.37■□□□□ 0.37
SATB2-201ENST00000260926 B4GALNT3Q6L9W6 998 aa17.36■□□□□ 0.37
SATB2-201ENST00000260926 A0A0G2JS52 829 aa17.34■□□□□ 0.37
SATB2-201ENST00000260926 IGF1RP08069 1367 aa17.33■□□□□ 0.36
SATB2-201ENST00000260926 EFCAB2Q5VUJ9 269 aa17.33■□□□□ 0.36
SATB2-201ENST00000260926 U2SURPO15042 1029 aaKnown RBP17.32■□□□□ 0.36
SATB2-201ENST00000260926 PLCB2Q00722 1185 aa17.32■□□□□ 0.36
SATB2-201ENST00000260926 FRAT1Q92837 279 aaPredicted RBP17.31■□□□□ 0.36
SATB2-201ENST00000260926 DHX57Q6P158 1386 aaKnown RBP17.31■□□□□ 0.36
SATB2-201ENST00000260926 ZRSR1Q15695 479 aaKnown RBP17.31■□□□□ 0.36
SATB2-201ENST00000260926 KANK1Q14678 1352 aa17.3■□□□□ 0.36
SATB2-201ENST00000260926 STK26Q9P289 416 aa17.3■□□□□ 0.36
SATB2-201ENST00000260926 RAD54L2Q9Y4B4 1467 aa17.3■□□□□ 0.36
SATB2-201ENST00000260926 ANKRD30AQ9BXX3 1397 aa17.3■□□□□ 0.36
SATB2-201ENST00000260926 CCER2I3L3R5 266 aa17.3■□□□□ 0.36
SATB2-201ENST00000260926 KIF3BO15066 747 aa17.28■□□□□ 0.36
SATB2-201ENST00000260926 SOX12O15370 315 aa17.28■□□□□ 0.36
SATB2-201ENST00000260926 MYH16Q9H6N6 1097 aa17.28■□□□□ 0.36
SATB2-201ENST00000260926 LMOD2Q6P5Q4 547 aa17.28■□□□□ 0.36
SATB2-201ENST00000260926 PPP4R2Q9NY27 417 aa17.28■□□□□ 0.36
SATB2-201ENST00000260926 FGD5Q6ZNL6 1462 aa17.28■□□□□ 0.36
SATB2-201ENST00000260926 SRPK2P78362 688 aaKnown RBP17.28■□□□□ 0.36
SATB2-201ENST00000260926 MAPK8IP3Q9UPT6 1336 aa17.27■□□□□ 0.36
SATB2-201ENST00000260926 RGS3P49796 1198 aa17.27■□□□□ 0.36
SATB2-201ENST00000260926 GOLGA6L6A8MZA4 724 aa17.27■□□□□ 0.35
SATB2-201ENST00000260926 NRDCO43847 1150 aa17.26■□□□□ 0.35
SATB2-201ENST00000260926 FTSJ3Q8IY81 847 aaKnown RBP17.25■□□□□ 0.35
SATB2-201ENST00000260926 NUDCQ9Y266 331 aa17.25■□□□□ 0.35
SATB2-201ENST00000260926 ROCK2O75116 1388 aaKnown RBP17.24■□□□□ 0.35
SATB2-201ENST00000260926 TRHP20396 242 aaPredicted RBP17.24■□□□□ 0.35
SATB2-201ENST00000260926 NUTM2DQ5VT03 806 aaPredicted RBP17.22■□□□□ 0.35
SATB2-201ENST00000260926 MORC1Q86VD1 984 aa17.21■□□□□ 0.35
SATB2-201ENST00000260926 CCDC18Q5T9S5 1454 aa17.21■□□□□ 0.35
SATB2-201ENST00000260926 SETQ01105 290 aaPredicted RBP17.2■□□□□ 0.34
SATB2-201ENST00000260926 SPAG9O60271 1321 aaKnown RBP17.18■□□□□ 0.34
SATB2-201ENST00000260926 RBM19Q9Y4C8 960 aaKnown RBP17.17■□□□□ 0.34
SATB2-201ENST00000260926 ZNF644Q9H582 1327 aaPredicted RBP17.17■□□□□ 0.34
SATB2-201ENST00000260926 NCAPD3P42695 1498 aa17.17■□□□□ 0.34
SATB2-201ENST00000260926 GAPVD1Q14C86 1478 aa17.16■□□□□ 0.34
SATB2-201ENST00000260926 KTN1Q86UP2 1357 aaKnown RBP17.16■□□□□ 0.34
SATB2-201ENST00000260926 HAP1P54257 671 aaPredicted RBP17.15■□□□□ 0.34
SATB2-201ENST00000260926 TPRNQ4KMQ1 711 aa17.15■□□□□ 0.34
SATB2-201ENST00000260926 ST20-MTHFSA0A0A6YYL1 179 aa17.14■□□□□ 0.33
SATB2-201ENST00000260926 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.335e-7■■■■□ 26.7
SATB2-201ENST00000260926 GOLGA6L1Q8N7Z2 621 aa17.13■□□□□ 0.33
SATB2-201ENST00000260926 PHLDB1Q86UU1 1377 aa17.13■□□□□ 0.33
SATB2-201ENST00000260926 PTPRGP23470 1445 aa17.13■□□□□ 0.33
SATB2-201ENST00000260926 KIAA2012Q0VF49 1180 aa17.12■□□□□ 0.33
SATB2-201ENST00000260926 KIF21BO75037 1637 aa17.11■□□□□ 0.33
SATB2-201ENST00000260926 RSPH4AQ5TD94 716 aa17.09■□□□□ 0.33
SATB2-201ENST00000260926 WASHC2CQ9Y4E1 1318 aa17.09■□□□□ 0.33
SATB2-201ENST00000260926 U2AF1L5P0DN76 240 aaPredicted RBP17.08■□□□□ 0.33
SATB2-201ENST00000260926 U2AF1Q01081 240 aaKnown RBP eCLIP17.08■□□□□ 0.33
SATB2-201ENST00000260926 ZNF771Q7L3S4 317 aaPredicted RBP17.08■□□□□ 0.33
SATB2-201ENST00000260926 SYNJ1O43426 1573 aa17.07■□□□□ 0.32
SATB2-201ENST00000260926 TRAK1Q9UPV9 953 aa17.06■□□□□ 0.32
SATB2-201ENST00000260926 RALBP1Q15311 655 aa17.06■□□□□ 0.32
SATB2-201ENST00000260926 NESP48681 1621 aa17.06■□□□□ 0.32
SATB2-201ENST00000260926 ARAP1Q96P48 1450 aa17.05■□□□□ 0.32
SATB2-201ENST00000260926 RCAN3Q9UKA8 241 aa17.05■□□□□ 0.32
SATB2-201ENST00000260926 DRC7Q8IY82 874 aa17.04■□□□□ 0.32
SATB2-201ENST00000260926 CCDC146Q8IYE0 955 aa17.04■□□□□ 0.32
SATB2-201ENST00000260926 HDGFP51858 240 aaKnown RBP17.03■□□□□ 0.32
SATB2-201ENST00000260926 FGD6Q6ZV73 1430 aa17.03■□□□□ 0.32
SATB2-201ENST00000260926 NOC3LQ8WTT2 800 aaKnown RBP17.02■□□□□ 0.32
SATB2-201ENST00000260926 GOLGA6L3A6NEY3 463 aa17.02■□□□□ 0.32
SATB2-201ENST00000260926 CYB5RLQ6IPT4 315 aa17.02■□□□□ 0.32
SATB2-201ENST00000260926 HDGFL2Q7Z4V5 671 aaPredicted RBP17.02■□□□□ 0.32
SATB2-201ENST00000260926 NUTM2FA1L443 756 aa17.02■□□□□ 0.31
SATB2-201ENST00000260926 CCDC144AA2RUR9 1427 aa17.01■□□□□ 0.31
SATB2-201ENST00000260926 NLRP13Q86W25 1043 aa17.01■□□□□ 0.31
SATB2-201ENST00000260926 ANO8Q9HCE9 1232 aaPredicted RBP17.01■□□□□ 0.31
SATB2-201ENST00000260926 CFTRP13569 1480 aa17■□□□□ 0.31
SATB2-201ENST00000260926 PANK3Q9H999 370 aa17■□□□□ 0.31
SATB2-201ENST00000260926 PRKRIP1Q9H875 184 aaPredicted RBP17■□□□□ 0.31
SATB2-201ENST00000260926 HSP90AB1P08238 724 aaKnown RBP16.99■□□□□ 0.31
SATB2-201ENST00000260926 LRRC9Q6ZRR7 1453 aa16.99■□□□□ 0.31
SATB2-201ENST00000260926 PAK3O75914 559 aaPredicted RBP16.97■□□□□ 0.31
SATB2-201ENST00000260926 MYOM3Q5VTT5 1437 aa16.97■□□□□ 0.31
SATB2-201ENST00000260926 USP47Q96K76 1375 aa16.96■□□□□ 0.31
SATB2-201ENST00000260926 APBB1O00213 710 aa16.94■□□□□ 0.3
SATB2-201ENST00000260926 CLUAP1Q96AJ1 413 aa16.94■□□□□ 0.3
SATB2-201ENST00000260926 DNAJC5BQ9UF47 199 aa16.94■□□□□ 0.3
SATB2-201ENST00000260926 PDE4CQ08493 712 aa16.94■□□□□ 0.3
SATB2-201ENST00000260926 MS4A1P11836 297 aa16.93■□□□□ 0.3
SATB2-201ENST00000260926 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.93■□□□□ 0.3
SATB2-201ENST00000260926 RRP7AQ9Y3A4 280 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms