RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 CEP170Q5SW79 1584 aa27.73■■■□□ 2.03
RARA-201ENST00000254066 USP35Q9P2H5 1018 aa27.73■■■□□ 2.03
RARA-201ENST00000254066 SMG6Q86US8 1419 aaKnown RBP27.71■■■□□ 2.03
RARA-201ENST00000254066 PTPN23Q9H3S7 1636 aa27.71■■■□□ 2.03
RARA-201ENST00000254066 FYCO1Q9BQS8 1478 aa27.71■■■□□ 2.03
RARA-201ENST00000254066 RNF123Q5XPI4 1314 aa27.7■■■□□ 2.03
RARA-201ENST00000254066 PRKRIP1Q9H875 184 aaPredicted RBP27.7■■■□□ 2.02
RARA-201ENST00000254066 IGF1RP08069 1367 aa27.69■■■□□ 2.02
RARA-201ENST00000254066 HSPA5P11021 654 aaKnown RBP27.68■■■□□ 2.02
RARA-201ENST00000254066 FGD6Q6ZV73 1430 aa27.67■■■□□ 2.02
RARA-201ENST00000254066 EIF4G2P78344 907 aaKnown RBP eCLIP27.65■■■□□ 2.021e-6■■■■■ 32.1
RARA-201ENST00000254066 SHROOM2Q13796 1616 aa27.65■■■□□ 2.02
RARA-201ENST00000254066 C11orf95C9JLR9 678 aaPredicted RBP27.65■■■□□ 2.02
RARA-201ENST00000254066 CCDC184Q52MB2 194 aa27.63■■■□□ 2.01
RARA-201ENST00000254066 CUL7Q14999 1698 aa27.62■■■□□ 2.01
RARA-201ENST00000254066 NCOA1Q15788 1441 aa27.62■■■□□ 2.01
RARA-201ENST00000254066 MRS2Q9HD23 443 aa27.62■■■□□ 2.01
RARA-201ENST00000254066 CASKIN1Q8WXD9 1431 aa27.61■■■□□ 2.01
RARA-201ENST00000254066 CCDC136Q96JN2 1154 aa27.6■■■□□ 2.01
RARA-201ENST00000254066 CARMIL1Q5VZK9 1371 aa27.59■■■□□ 2.01
RARA-201ENST00000254066 PLEKHG5O94827 1062 aa27.59■■■□□ 2.01
RARA-201ENST00000254066 FAM9BQ8IZU0 186 aa27.59■■■□□ 2.01
RARA-201ENST00000254066 IL27Q8NEV9 243 aa27.58■■■□□ 2.01
RARA-201ENST00000254066 NAIPQ13075 1403 aa27.58■■■□□ 2.01
RARA-201ENST00000254066 PKNOX2Q96KN3 472 aa27.58■■■□□ 2.01
RARA-201ENST00000254066 EFCAB5A4FU69 1503 aa27.57■■■□□ 2
RARA-201ENST00000254066 FMN1Q68DA7 1419 aa27.57■■■□□ 2
RARA-201ENST00000254066 CCDC7Q96M83 1385 aa27.57■■■□□ 2
RARA-201ENST00000254066 WASHC2CQ9Y4E1 1318 aa27.57■■■□□ 2
RARA-201ENST00000254066 NUDCQ9Y266 331 aa27.55■■■□□ 2
RARA-201ENST00000254066 POLR1AO95602 1720 aaPredicted RBP27.53■■■□□ 2
RARA-201ENST00000254066 ERCC6L2Q5T890 1561 aa27.5■■□□□ 1.99
RARA-201ENST00000254066 PTPRKQ15262 1439 aa27.5■■□□□ 1.99
RARA-201ENST00000254066 JPH4Q96JJ6 628 aa27.5■■□□□ 1.99
RARA-201ENST00000254066 HECW1Q76N89 1606 aa27.5■■□□□ 1.99
RARA-201ENST00000254066 PODXL2Q9NZ53 605 aa27.49■■□□□ 1.99
RARA-201ENST00000254066 PPM1GO15355 546 aaPredicted RBP27.48■■□□□ 1.99
RARA-201ENST00000254066 AKNAQ7Z591 1439 aa27.48■■□□□ 1.99
RARA-201ENST00000254066 PRG4Q92954 1404 aaPredicted RBP27.47■■□□□ 1.99
RARA-201ENST00000254066 KIAA0586Q9BVV6 1533 aa27.46■■□□□ 1.99
RARA-201ENST00000254066 TRHP20396 242 aaPredicted RBP27.46■■□□□ 1.99
RARA-201ENST00000254066 TCERG1O14776 1098 aaKnown RBP27.43■■□□□ 1.98
RARA-201ENST00000254066 NEFMP07197 916 aa27.4■■□□□ 1.98
RARA-201ENST00000254066 GCC2Q8IWJ2 1684 aa27.39■■□□□ 1.97
RARA-201ENST00000254066 MYOM3Q5VTT5 1437 aa27.37■■□□□ 1.97
RARA-201ENST00000254066 FHOD3Q2V2M9 1422 aa27.37■■□□□ 1.97
RARA-201ENST00000254066 MS4A1P11836 297 aa27.37■■□□□ 1.97
RARA-201ENST00000254066 DENND4BO75064 1496 aaPredicted RBP27.34■■□□□ 1.97
RARA-201ENST00000254066 RTN4Q9NQC3 1192 aaKnown RBP27.33■■□□□ 1.97
RARA-201ENST00000254066 ATP1B4Q9UN42 357 aaPredicted RBP27.33■■□□□ 1.97
RARA-201ENST00000254066 SPATA31E1Q6ZUB1 1445 aa27.33■■□□□ 1.97
RARA-201ENST00000254066 MTUS2Q5JR59 1369 aa27.32■■□□□ 1.96
RARA-201ENST00000254066 KIF7Q2M1P5 1343 aa27.29■■□□□ 1.96
RARA-201ENST00000254066 SUPT6HQ7KZ85 1726 aaKnown RBP27.28■■□□□ 1.96
RARA-201ENST00000254066 BACH2Q9BYV9 841 aa27.27■■□□□ 1.96
RARA-201ENST00000254066 PDE4AP27815 886 aa27.26■■□□□ 1.95
RARA-201ENST00000254066 DDRGK1Q96HY6 314 aa27.26■■□□□ 1.95
RARA-201ENST00000254066 L3MBTL2Q969R5 705 aa27.26■■□□□ 1.95
RARA-201ENST00000254066 P3H3Q8IVL6 736 aa27.25■■□□□ 1.95
RARA-201ENST00000254066 MIA2Q96PC5 1412 aa27.23■■□□□ 1.95
RARA-201ENST00000254066 TCOF1Q13428 1488 aaKnown RBP27.23■■□□□ 1.95
RARA-201ENST00000254066 GSE1Q14687 1217 aa27.23■■□□□ 1.95
RARA-201ENST00000254066 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.23■■□□□ 1.95
RARA-201ENST00000254066 DHX29Q7Z478 1369 aaKnown RBP27.23■■□□□ 1.95
RARA-201ENST00000254066 EHBP1L1Q8N3D4 1523 aa27.23■■□□□ 1.95
RARA-201ENST00000254066 IQGAP2Q13576 1575 aa27.22■■□□□ 1.95
RARA-201ENST00000254066 CTTNBP2Q8WZ74 1663 aa27.22■■□□□ 1.95
RARA-201ENST00000254066 LAS1LQ9Y4W2 734 aaKnown RBP27.21■■□□□ 1.95
RARA-201ENST00000254066 CARMIL2Q6F5E8 1435 aa27.21■■□□□ 1.95
RARA-201ENST00000254066 RPRD2Q5VT52 1461 aaKnown RBP27.2■■□□□ 1.94
RARA-201ENST00000254066 ARID4BQ4LE39 1312 aaPredicted RBP27.18■■□□□ 1.94
RARA-201ENST00000254066 NPM2Q86SE8 214 aaKnown RBP27.18■■□□□ 1.94
RARA-201ENST00000254066 UGGT2Q9NYU1 1516 aa27.17■■□□□ 1.94
RARA-201ENST00000254066 TEX14Q8IWB6 1497 aa27.17■■□□□ 1.94
RARA-201ENST00000254066 MPHOSPH9Q99550 1183 aa27.16■■□□□ 1.94
RARA-201ENST00000254066 NPM1P06748 294 aaKnown RBP eCLIP27.15■■□□□ 1.94
RARA-201ENST00000254066 RRP1P56182 461 aaKnown RBP27.15■■□□□ 1.94
RARA-201ENST00000254066 PNISRQ8TF01 805 aaKnown RBP27.13■■□□□ 1.93
RARA-201ENST00000254066 PTPRGP23470 1445 aa27.12■■□□□ 1.93
RARA-201ENST00000254066 LRRIQ1Q96JM4 1722 aa27.11■■□□□ 1.93
RARA-201ENST00000254066 NBPF8Q3BBV2 869 aa27.1■■□□□ 1.93
RARA-201ENST00000254066 ANKRD30BQ9BXX2 1392 aa27.1■■□□□ 1.93
RARA-201ENST00000254066 LRPPRCP42704 1394 aaKnown RBP27.1■■□□□ 1.93
RARA-201ENST00000254066 RSPH6AQ9H0K4 717 aa27.09■■□□□ 1.93
RARA-201ENST00000254066 BRPF3Q9ULD4 1205 aa27.09■■□□□ 1.93
RARA-201ENST00000254066 ADCY10Q96PN6 1610 aa27.09■■□□□ 1.93
RARA-201ENST00000254066 SAMD9Q5K651 1589 aa27.07■■□□□ 1.92
RARA-201ENST00000254066 ROCK2O75116 1388 aaKnown RBP27.06■■□□□ 1.92
RARA-201ENST00000254066 KTN1Q86UP2 1357 aaKnown RBP27.06■■□□□ 1.92
RARA-201ENST00000254066 RRP7BPQ9NSQ0 103 aa27.06■■□□□ 1.92
RARA-201ENST00000254066 KDM6BO15054 1643 aa27.05■■□□□ 1.92
RARA-201ENST00000254066 EXOC6Q8TAG9 804 aa27.05■■□□□ 1.92
RARA-201ENST00000254066 NFKBIBQ15653 356 aa27.04■■□□□ 1.92
RARA-201ENST00000254066 DISP1Q96F81 1524 aa27.03■■□□□ 1.92
RARA-201ENST00000254066 PDE3BQ13370 1112 aa27.02■■□□□ 1.92
RARA-201ENST00000254066 FAM43AQ8N2R8 423 aa27.01■■□□□ 1.92
RARA-201ENST00000254066 BRD4O60885 1362 aaPredicted RBP27■■□□□ 1.91
RARA-201ENST00000254066 TMC1Q8TDI8 760 aa27■■□□□ 1.91
RARA-201ENST00000254066 RCAN3Q9UKA8 241 aa27■■□□□ 1.91
RARA-201ENST00000254066 ABCC10Q5T3U5 1492 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms