RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.11■■□□□ 1.29
NDFIP1-201ENST00000253814 ST20-MTHFSA0A0A6YYL1 179 aa23.1■■□□□ 1.29
NDFIP1-201ENST00000253814 PAK3O75914 559 aaPredicted RBP23.1■■□□□ 1.29
NDFIP1-201ENST00000253814 EXOC6Q8TAG9 804 aa23.1■■□□□ 1.29
NDFIP1-201ENST00000253814 CASKIN1Q8WXD9 1431 aa23.1■■□□□ 1.29
NDFIP1-201ENST00000253814 CNTLNQ9NXG0 1405 aa23.1■■□□□ 1.29
NDFIP1-201ENST00000253814 PLIN1O60240 522 aa23.09■■□□□ 1.29
NDFIP1-201ENST00000253814 NCOA2Q15596 1464 aa23.08■■□□□ 1.29
NDFIP1-201ENST00000253814 NUP155O75694 1391 aa23.07■■□□□ 1.28
NDFIP1-201ENST00000253814 SENP3Q9H4L4 574 aaPredicted RBP23.07■■□□□ 1.28
NDFIP1-201ENST00000253814 PPM1GO15355 546 aaPredicted RBP23.06■■□□□ 1.28
NDFIP1-201ENST00000253814 DDRGK1Q96HY6 314 aa23.06■■□□□ 1.28
NDFIP1-201ENST00000253814 KNSTRNQ9Y448 316 aa23.05■■□□□ 1.28
NDFIP1-201ENST00000253814 NEUROD2Q15784 382 aa23.05■■□□□ 1.28
NDFIP1-201ENST00000253814 AKNAQ7Z591 1439 aa23.04■■□□□ 1.28
NDFIP1-201ENST00000253814 USP47Q96K76 1375 aa23.03■■□□□ 1.28
NDFIP1-201ENST00000253814 HFM1A2PYH4 1435 aa23.01■■□□□ 1.27
NDFIP1-201ENST00000253814 FYCO1Q9BQS8 1478 aa23■■□□□ 1.27
NDFIP1-201ENST00000253814 NAIPQ13075 1403 aa22.99■■□□□ 1.27
NDFIP1-201ENST00000253814 PCF11O94913 1555 aaKnown RBP22.99■■□□□ 1.27
NDFIP1-201ENST00000253814 SLC4A3P48751 1232 aa22.99■■□□□ 1.27
NDFIP1-201ENST00000253814 TCERG1O14776 1098 aaKnown RBP22.99■■□□□ 1.27
NDFIP1-201ENST00000253814 PEG3Q9GZU2 1588 aa22.98■■□□□ 1.27
NDFIP1-201ENST00000253814 ROCK2O75116 1388 aaKnown RBP22.98■■□□□ 1.27
NDFIP1-201ENST00000253814 UPF2Q9HAU5 1272 aaKnown RBP22.97■■□□□ 1.27
NDFIP1-201ENST00000253814 PDE4AP27815 886 aa22.96■■□□□ 1.27
NDFIP1-201ENST00000253814 KTN1Q86UP2 1357 aaKnown RBP22.96■■□□□ 1.27
NDFIP1-201ENST00000253814 TNNT2P45379 298 aaPredicted RBP22.95■■□□□ 1.26
NDFIP1-201ENST00000253814 RALBP1Q15311 655 aa22.95■■□□□ 1.26
NDFIP1-201ENST00000253814 RRP1P56182 461 aaKnown RBP22.95■■□□□ 1.26
NDFIP1-201ENST00000253814 HNRNPMP52272 730 aaKnown RBP eCLIP22.94■■□□□ 1.26
NDFIP1-201ENST00000253814 NLRP13Q86W25 1043 aa22.93■■□□□ 1.26
NDFIP1-201ENST00000253814 FRAT1Q92837 279 aaPredicted RBP22.93■■□□□ 1.26
NDFIP1-201ENST00000253814 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.93■■□□□ 1.26
NDFIP1-201ENST00000253814 BIVM-ERCC5R4GMW8 1640 aa22.9■■□□□ 1.26
NDFIP1-201ENST00000253814 TMF1P82094 1093 aa22.9■■□□□ 1.26
NDFIP1-201ENST00000253814 MYBBP1AQ9BQG0 1328 aaKnown RBP22.89■■□□□ 1.26
NDFIP1-201ENST00000253814 ANKRD30AQ9BXX3 1397 aa22.89■■□□□ 1.25
NDFIP1-201ENST00000253814 GAPVD1Q14C86 1478 aa22.88■■□□□ 1.25
NDFIP1-201ENST00000253814 PTPRKQ15262 1439 aa22.88■■□□□ 1.25
NDFIP1-201ENST00000253814 NESP48681 1621 aa22.87■■□□□ 1.25
NDFIP1-201ENST00000253814 CDCA7LQ96GN5 454 aa22.87■■□□□ 1.25
NDFIP1-201ENST00000253814 KIF15Q9NS87 1388 aa22.87■■□□□ 1.25
NDFIP1-201ENST00000253814 CRBNQ96SW2 442 aa22.86■■□□□ 1.25
NDFIP1-201ENST00000253814 PDS5BQ9NTI5 1447 aa22.83■■□□□ 1.25
NDFIP1-201ENST00000253814 CCDC146Q8IYE0 955 aa22.83■■□□□ 1.24
NDFIP1-201ENST00000253814 PANK3Q9H999 370 aa22.82■■□□□ 1.24
NDFIP1-201ENST00000253814 HSP90AA1P07900 732 aaKnown RBP22.82■■□□□ 1.24
NDFIP1-201ENST00000253814 POLA1P09884 1462 aaPredicted RBP22.82■■□□□ 1.24
NDFIP1-201ENST00000253814 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.81■■□□□ 1.24
NDFIP1-201ENST00000253814 AQRO60306 1485 aaKnown RBP eCLIP22.81■■□□□ 1.242e-9■■■■■ 39.4
NDFIP1-201ENST00000253814 HMGXB3Q12766 1538 aa22.81■■□□□ 1.24
NDFIP1-201ENST00000253814 MAP3K1Q13233 1512 aa22.81■■□□□ 1.24
NDFIP1-201ENST00000253814 PNISRQ8TF01 805 aaKnown RBP22.81■■□□□ 1.24
NDFIP1-201ENST00000253814 SPRYD3Q8NCJ5 442 aa22.79■■□□□ 1.24
NDFIP1-201ENST00000253814 SKAP1Q86WV1 359 aa22.79■■□□□ 1.24
NDFIP1-201ENST00000253814 BECN1Q14457 450 aa22.78■■□□□ 1.24
NDFIP1-201ENST00000253814 SLKQ9H2G2 1235 aaPredicted RBP22.77■■□□□ 1.24
NDFIP1-201ENST00000253814 PDE3BQ13370 1112 aa22.76■■□□□ 1.23
NDFIP1-201ENST00000253814 EFCAB5A4FU69 1503 aa22.76■■□□□ 1.23
NDFIP1-201ENST00000253814 CDCA8Q53HL2 280 aa22.74■■□□□ 1.23
NDFIP1-201ENST00000253814 TOPBP1Q92547 1522 aa22.73■■□□□ 1.23
NDFIP1-201ENST00000253814 IL27Q8NEV9 243 aa22.72■■□□□ 1.23
NDFIP1-201ENST00000253814 GOLGA2Q08379 1002 aa22.71■■□□□ 1.23
NDFIP1-201ENST00000253814 PTPN23Q9H3S7 1636 aa22.7■■□□□ 1.22
NDFIP1-201ENST00000253814 CDK13Q14004 1512 aaKnown RBP22.68■■□□□ 1.22
NDFIP1-201ENST00000253814 SMG6Q86US8 1419 aaKnown RBP22.68■■□□□ 1.22
NDFIP1-201ENST00000253814 NBPF1Q3BBV0 1214 aa22.67■■□□□ 1.22
NDFIP1-201ENST00000253814 JPH4Q96JJ6 628 aa22.67■■□□□ 1.22
NDFIP1-201ENST00000253814 NCOA1Q15788 1441 aa22.66■■□□□ 1.22
NDFIP1-201ENST00000253814 EHBP1L1Q8N3D4 1523 aa22.65■■□□□ 1.22
NDFIP1-201ENST00000253814 ANKRD30BQ9BXX2 1392 aa22.65■■□□□ 1.22
NDFIP1-201ENST00000253814 FTSJ3Q8IY81 847 aaKnown RBP22.64■■□□□ 1.22
NDFIP1-201ENST00000253814 CLUAP1Q96AJ1 413 aa22.64■■□□□ 1.22
NDFIP1-201ENST00000253814 SUPT6HQ7KZ85 1726 aaKnown RBP22.63■■□□□ 1.21
NDFIP1-201ENST00000253814 ANKRD50Q9ULJ7 1429 aa22.62■■□□□ 1.21
NDFIP1-201ENST00000253814 CCDC144AA2RUR9 1427 aa22.62■■□□□ 1.21
NDFIP1-201ENST00000253814 PRDM2Q13029 1718 aa22.62■■□□□ 1.21
NDFIP1-201ENST00000253814 MS4A1P11836 297 aa22.61■■□□□ 1.21
NDFIP1-201ENST00000253814 ADAMTS8Q9UP79 889 aa22.61■■□□□ 1.21
NDFIP1-201ENST00000253814 GZF1Q9H116 711 aaPredicted RBP22.6■■□□□ 1.21
NDFIP1-201ENST00000253814 GSE1Q14687 1217 aa22.6■■□□□ 1.21
NDFIP1-201ENST00000253814 ANO8Q9HCE9 1232 aaPredicted RBP22.6■■□□□ 1.21
NDFIP1-201ENST00000253814 USP35Q9P2H5 1018 aa22.6■■□□□ 1.21
NDFIP1-201ENST00000253814 APAF1O14727 1248 aa22.59■■□□□ 1.21
NDFIP1-201ENST00000253814 RRP7AQ9Y3A4 280 aaKnown RBP22.59■■□□□ 1.21
NDFIP1-201ENST00000253814 BCL2L13Q9BXK5 485 aa22.59■■□□□ 1.21
NDFIP1-201ENST00000253814 BACH2Q9BYV9 841 aa22.59■■□□□ 1.21
NDFIP1-201ENST00000253814 DNAJC5BQ9UF47 199 aa22.59■■□□□ 1.21
NDFIP1-201ENST00000253814 BRD4O60885 1362 aaPredicted RBP22.59■■□□□ 1.21
NDFIP1-201ENST00000253814 CARMIL2Q6F5E8 1435 aa22.59■■□□□ 1.21
NDFIP1-201ENST00000253814 DAPK1P53355 1430 aa22.58■■□□□ 1.21
NDFIP1-201ENST00000253814 ABCA10Q8WWZ4 1543 aa22.58■■□□□ 1.21
NDFIP1-201ENST00000253814 FAM161AQ3B820 660 aa22.58■■□□□ 1.21
NDFIP1-201ENST00000253814 SLC24A1O60721 1099 aa22.57■■□□□ 1.2
NDFIP1-201ENST00000253814 PRG4Q92954 1404 aaPredicted RBP22.57■■□□□ 1.2
NDFIP1-201ENST00000253814 CENPQQ7L2Z9 268 aaPredicted RBP22.57■■□□□ 1.2
NDFIP1-201ENST00000253814 U2SURPO15042 1029 aaKnown RBP22.57■■□□□ 1.2
NDFIP1-201ENST00000253814 SAFB2Q14151 953 aaKnown RBP eCLIP22.56■■□□□ 1.2
NDFIP1-201ENST00000253814 NFKBIBQ15653 356 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms