RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Spag9Q58A65 1321 aaKnown RBP20.98■□□□□ 0.95
Upf1-202ENSMUST00000215817 Aebp2Q9Z248 504 aaKnown RBP20.97■□□□□ 0.95
Upf1-202ENSMUST00000215817 NgefQ8CHT1 710 aa20.97■□□□□ 0.95
Upf1-202ENSMUST00000215817 Ifit1bl1D3Z6F0 470 aa20.96■□□□□ 0.95
Upf1-202ENSMUST00000215817 Txndc2Q6P902 515 aa20.96■□□□□ 0.95
Upf1-202ENSMUST00000215817 Ccdc141E9Q8Q6 1531 aa20.95■□□□□ 0.94
Upf1-202ENSMUST00000215817 Cux1P53564 1515 aa20.95■□□□□ 0.94
Upf1-202ENSMUST00000215817 Stk26Q99JT2 416 aa20.94■□□□□ 0.94
Upf1-202ENSMUST00000215817 TnnQ80Z71 1560 aa20.94■□□□□ 0.94
Upf1-202ENSMUST00000215817 Map3k5O35099 1380 aa20.94■□□□□ 0.94
Upf1-202ENSMUST00000215817 Gm156Q58A37 223 aa20.94■□□□□ 0.94
Upf1-202ENSMUST00000215817 Samd9lQ69Z37 1561 aa20.93■□□□□ 0.94
Upf1-202ENSMUST00000215817 Stag3O70576 1240 aa20.93■□□□□ 0.94
Upf1-202ENSMUST00000215817 Fam163aQ8CAA5 168 aa20.91■□□□□ 0.94
Upf1-202ENSMUST00000215817 Arhgef5E9Q7D5 1581 aa20.9■□□□□ 0.94
Upf1-202ENSMUST00000215817 AqrQ8CFQ3 1481 aaKnown RBP20.89■□□□□ 0.93
Upf1-202ENSMUST00000215817 Zfp644E9QA22 1323 aa20.89■□□□□ 0.93
Upf1-202ENSMUST00000215817 Exosc9Q9JHI7 438 aaKnown RBP20.88■□□□□ 0.93
Upf1-202ENSMUST00000215817 Arhgap5P97393 1501 aa20.88■□□□□ 0.93
Upf1-202ENSMUST00000215817 Ythdc2B2RR83 1445 aaKnown RBP20.87■□□□□ 0.93
Upf1-202ENSMUST00000215817 Psme1P97371 249 aa20.87■□□□□ 0.93
Upf1-202ENSMUST00000215817 Csrnp3P59055 597 aa20.87■□□□□ 0.93
Upf1-202ENSMUST00000215817 UacaQ8CGB3 1411 aa20.86■□□□□ 0.93
Upf1-202ENSMUST00000215817 Gm38655A0A286YDK6 273 aa20.86■□□□□ 0.93
Upf1-202ENSMUST00000215817 Cnga1P29974 684 aa20.86■□□□□ 0.93
Upf1-202ENSMUST00000215817 4933416C03RikQ3V063 378 aa20.86■□□□□ 0.93
Upf1-202ENSMUST00000215817 PxdnQ3UQ28 1475 aa20.84■□□□□ 0.93
Upf1-202ENSMUST00000215817 Pla2r1Q62028 1487 aa20.84■□□□□ 0.93
Upf1-202ENSMUST00000215817 Igf1rQ60751 1373 aa20.82■□□□□ 0.92
Upf1-202ENSMUST00000215817 Tnnt3Q9QZ47 272 aa20.81■□□□□ 0.92
Upf1-202ENSMUST00000215817 Rundc1Q0VDN7 615 aa20.8■□□□□ 0.92
Upf1-202ENSMUST00000215817 Mug1P28665 1476 aa20.77■□□□□ 0.92
Upf1-202ENSMUST00000215817 Mrs2Q5NCE8 434 aa20.77■□□□□ 0.92
Upf1-202ENSMUST00000215817 Sin3aQ60520 1274 aaKnown RBP20.77■□□□□ 0.92
Upf1-202ENSMUST00000215817 Magi1Q6RHR9 1471 aa20.76■□□□□ 0.91
Upf1-202ENSMUST00000215817 Pde4cQ3UEI1 686 aa20.76■□□□□ 0.91
Upf1-202ENSMUST00000215817 Rsph4aQ8BYM7 716 aa20.75■□□□□ 0.91
Upf1-202ENSMUST00000215817 Polr3glQ8R0C0 218 aa20.75■□□□□ 0.91
Upf1-202ENSMUST00000215817 Afap1Q80YS6 731 aa20.74■□□□□ 0.91
Upf1-202ENSMUST00000215817 WizO88286 1684 aaKnown RBP20.73■□□□□ 0.91
Upf1-202ENSMUST00000215817 Gpatch8A2A6A1 1505 aa20.73■□□□□ 0.91
Upf1-202ENSMUST00000215817 Fan1Q69ZT1 1020 aa20.73■□□□□ 0.91
Upf1-202ENSMUST00000215817 Lrriq1Q0P5X1 1673 aa20.73■□□□□ 0.91
Upf1-202ENSMUST00000215817 Pcf11G3X9Z4 1553 aa20.73■□□□□ 0.91
Upf1-202ENSMUST00000215817 Prdm16A2A935 1275 aa20.72■□□□□ 0.91
Upf1-202ENSMUST00000215817 Nup160Q9Z0W3 1402 aaKnown RBP20.71■□□□□ 0.91
Upf1-202ENSMUST00000215817 Rangap1P46061 589 aaKnown RBP20.71■□□□□ 0.91
Upf1-202ENSMUST00000215817 Tiam1Q60610 1591 aa20.7■□□□□ 0.9
Upf1-202ENSMUST00000215817 Atp10dQ8K2X1 1416 aa20.7■□□□□ 0.9
Upf1-202ENSMUST00000215817 A2mQ6GQT1 1474 aa20.69■□□□□ 0.9
Upf1-202ENSMUST00000215817 Rad21Q61550 635 aaKnown RBP20.69■□□□□ 0.9
Upf1-202ENSMUST00000215817 Magi3Q9EQJ9 1476 aa20.69■□□□□ 0.9
Upf1-202ENSMUST00000215817 Unc13aQ4KUS2 1712 aa20.68■□□□□ 0.9
Upf1-202ENSMUST00000215817 Znf316Q6PGE4 1016 aa20.68■□□□□ 0.9
Upf1-202ENSMUST00000215817 Cwc22Q8C5N3 908 aaKnown RBP20.68■□□□□ 0.9
Upf1-202ENSMUST00000215817 Gtf2e1Q9D0D5 440 aa20.68■□□□□ 0.9
Upf1-202ENSMUST00000215817 NeflP08551 543 aa20.67■□□□□ 0.9
Upf1-202ENSMUST00000215817 Gapvd1Q6PAR5 1458 aa20.67■□□□□ 0.9
Upf1-202ENSMUST00000215817 NexmifQ5DTT1 1515 aa20.66■□□□□ 0.9
Upf1-202ENSMUST00000215817 Sox12Q04890 314 aa20.66■□□□□ 0.9
Upf1-202ENSMUST00000215817 Usp47Q8BY87 1376 aa20.65■□□□□ 0.9
Upf1-202ENSMUST00000215817 Ankrd26Q811D2 1581 aa20.65■□□□□ 0.9
Upf1-202ENSMUST00000215817 Anks4bQ8K3X6 423 aa20.65■□□□□ 0.9
Upf1-202ENSMUST00000215817 Utp14aQ640M1 767 aaKnown RBP20.64■□□□□ 0.89
Upf1-202ENSMUST00000215817 Abcc1O35379 1528 aa20.64■□□□□ 0.89
Upf1-202ENSMUST00000215817 Shroom2A2ALU4 1481 aa20.63■□□□□ 0.89
Upf1-202ENSMUST00000215817 Rtl5Q5DTT4 599 aa20.62■□□□□ 0.89
Upf1-202ENSMUST00000215817 Pip4k2bQ80XI4 416 aa20.62■□□□□ 0.89
Upf1-202ENSMUST00000215817 Shq1Q7TMX5 569 aa20.61■□□□□ 0.89
Upf1-202ENSMUST00000215817 Ncoa3O09000 1398 aa20.6■□□□□ 0.89
Upf1-202ENSMUST00000215817 1700123L14RikQ3V2K7 440 aa20.59■□□□□ 0.89
Upf1-202ENSMUST00000215817 Srcin1Q9QWI6 1250 aa20.59■□□□□ 0.89
Upf1-202ENSMUST00000215817 Rusc2Q80U22 1514 aa20.58■□□□□ 0.89
Upf1-202ENSMUST00000215817 Aplp2Q06335 707 aa20.58■□□□□ 0.89
Upf1-202ENSMUST00000215817 Ecm2Q5FW85 670 aa20.57■□□□□ 0.88
Upf1-202ENSMUST00000215817 Fhad1A6PWD2 1420 aa20.56■□□□□ 0.88
Upf1-202ENSMUST00000215817 Ttll5Q8CHB8 1328 aa20.56■□□□□ 0.88
Upf1-202ENSMUST00000215817 ErbinQ80TH2 1402 aa20.51■□□□□ 0.87
Upf1-202ENSMUST00000215817 Nsd2Q8BVE8 1365 aa20.5■□□□□ 0.87
Upf1-202ENSMUST00000215817 Irx6Q9ER75 438 aa20.5■□□□□ 0.87
Upf1-202ENSMUST00000215817 Abcc5Q9R1X5 1436 aa20.5■□□□□ 0.87
Upf1-202ENSMUST00000215817 Fancd2Q80V62 1450 aa20.5■□□□□ 0.87
Upf1-202ENSMUST00000215817 4930567H17RikQ3V0K5 233 aa20.48■□□□□ 0.87
Upf1-202ENSMUST00000215817 Cd109Q8R422 1442 aa20.48■□□□□ 0.87
Upf1-202ENSMUST00000215817 Slx4Q6P1D7 1565 aa20.48■□□□□ 0.87
Upf1-202ENSMUST00000215817 Ggt6Q6PDE7 497 aa20.47■□□□□ 0.87
Upf1-202ENSMUST00000215817 Vps8Q0P5W1 1427 aa20.47■□□□□ 0.87
Upf1-202ENSMUST00000215817 Q9D9H8 365 aa20.47■□□□□ 0.87
Upf1-202ENSMUST00000215817 Eif4g3Q80XI3 1579 aaKnown RBP20.46■□□□□ 0.87
Upf1-202ENSMUST00000215817 Rock2P70336 1388 aa20.46■□□□□ 0.87
Upf1-202ENSMUST00000215817 BC005561E9Q5E2 1589 aa20.46■□□□□ 0.87
Upf1-202ENSMUST00000215817 Il16O54824 1322 aa20.45■□□□□ 0.86
Upf1-202ENSMUST00000215817 Wwc2Q6NXJ0 1187 aa20.45■□□□□ 0.86
Upf1-202ENSMUST00000215817 Usp40Q8BWR4 1235 aa20.45■□□□□ 0.86
Upf1-202ENSMUST00000215817 Trim26Q99PN3 545 aa20.44■□□□□ 0.86
Upf1-202ENSMUST00000215817 Mink1Q9JM52 1308 aa20.43■□□□□ 0.86
Upf1-202ENSMUST00000215817 Gm1043A0A140LJC2 1431 aa20.43■□□□□ 0.86
Upf1-202ENSMUST00000215817 Dhx9O70133 1380 aaKnown RBP20.42■□□□□ 0.86
Upf1-202ENSMUST00000215817 Ncapd3Q6ZQK0 1506 aa20.42■□□□□ 0.86
Upf1-202ENSMUST00000215817 Anp32aO35381 247 aa20.41■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms