RNA–Protein interactions for RNA: ENSMUST00000209256.1

Ptpre-202, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,593 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-202ENSMUST00000209256 Sin3aQ60520 1274 aaKnown RBP28.67■■■□□ 2.18
Ptpre-202ENSMUST00000209256 Ankrd36D3Z4K0 1415 aa28.66■■■□□ 2.18
Ptpre-202ENSMUST00000209256 Ttbk1Q6PCN3 1308 aa28.65■■■□□ 2.18
Ptpre-202ENSMUST00000209256 BC005561E9Q5E2 1589 aa28.64■■■□□ 2.18
Ptpre-202ENSMUST00000209256 Ccnb3Q810T2 1396 aa28.62■■■□□ 2.17
Ptpre-202ENSMUST00000209256 Upf2A2AT37 1269 aaKnown RBP28.6■■■□□ 2.17
Ptpre-202ENSMUST00000209256 Ncoa2Q61026 1462 aa28.6■■■□□ 2.17
Ptpre-202ENSMUST00000209256 Egfem1Q8C088 590 aa28.59■■■□□ 2.17
Ptpre-202ENSMUST00000209256 NexmifQ5DTT1 1515 aa28.58■■■□□ 2.17
Ptpre-202ENSMUST00000209256 Dnmt1P13864 1620 aaKnown RBP28.57■■■□□ 2.16
Ptpre-202ENSMUST00000209256 Rapgef6Q5NCJ1 1609 aa28.57■■■□□ 2.16
Ptpre-202ENSMUST00000209256 Ccdc27Q3V036 639 aa28.57■■■□□ 2.16
Ptpre-202ENSMUST00000209256 AknaQ80VW7 1404 aa28.56■■■□□ 2.16
Ptpre-202ENSMUST00000209256 Map3k4O08648 1597 aa28.56■■■□□ 2.16
Ptpre-202ENSMUST00000209256 Neo1P97798 1493 aa28.55■■■□□ 2.16
Ptpre-202ENSMUST00000209256 Camsap2Q8C1B1 1461 aa28.55■■■□□ 2.16
Ptpre-202ENSMUST00000209256 Ccer2J3QPU5 274 aa28.55■■■□□ 2.16
Ptpre-202ENSMUST00000209256 Ncoa3O09000 1398 aa28.55■■■□□ 2.16
Ptpre-202ENSMUST00000209256 Amer1Q7TS75 1132 aa28.55■■■□□ 2.16
Ptpre-202ENSMUST00000209256 Lmtk2Q3TYD6 1471 aa28.54■■■□□ 2.16
Ptpre-202ENSMUST00000209256 Fhad1A6PWD2 1420 aa28.52■■■□□ 2.16
Ptpre-202ENSMUST00000209256 Arhgap31A6X8Z5 1425 aa28.52■■■□□ 2.16
Ptpre-202ENSMUST00000209256 Mug1P28665 1476 aa28.51■■■□□ 2.15
Ptpre-202ENSMUST00000209256 Fgd6Q69ZL1 1399 aa28.51■■■□□ 2.15
Ptpre-202ENSMUST00000209256 Fkbp15Q6P9Q6 1216 aaKnown RBP28.5■■■□□ 2.15
Ptpre-202ENSMUST00000209256 Zcchc11B2RX14 1644 aaKnown RBP28.49■■■□□ 2.15
Ptpre-202ENSMUST00000209256 P3h3Q8CG70 732 aa28.48■■■□□ 2.15
Ptpre-202ENSMUST00000209256 Arhgef11Q68FM7 1552 aa28.45■■■□□ 2.15
Ptpre-202ENSMUST00000209256 A2mQ6GQT1 1474 aa28.45■■■□□ 2.14
Ptpre-202ENSMUST00000209256 Mia2Q91ZV0 1396 aa28.44■■■□□ 2.14
Ptpre-202ENSMUST00000209256 Jph4Q80WT0 628 aa28.44■■■□□ 2.14
Ptpre-202ENSMUST00000209256 Gcc2Q8CHG3 1679 aa28.42■■■□□ 2.14
Ptpre-202ENSMUST00000209256 Mrs2Q5NCE8 434 aa28.42■■■□□ 2.14
Ptpre-202ENSMUST00000209256 Chic2Q9D9G3 165 aa28.41■■■□□ 2.14
Ptpre-202ENSMUST00000209256 Vps8Q0P5W1 1427 aa28.41■■■□□ 2.14
Ptpre-202ENSMUST00000209256 Naip5Q9R016 1403 aa28.41■■■□□ 2.14
Ptpre-202ENSMUST00000209256 Slc4a2P13808 1237 aaKnown RBP28.39■■■□□ 2.13
Ptpre-202ENSMUST00000209256 Naip2Q9QUK4 1447 aa28.38■■■□□ 2.13
Ptpre-202ENSMUST00000209256 Ccdc141E9Q8Q6 1531 aa28.38■■■□□ 2.13
Ptpre-202ENSMUST00000209256 Mroh2aD3Z750 1679 aa28.37■■■□□ 2.13
Ptpre-202ENSMUST00000209256 Arhgef12Q8R4H2 1543 aaKnown RBP28.37■■■□□ 2.13
Ptpre-202ENSMUST00000209256 Cdc42bpaQ3UU96 1719 aa28.37■■■□□ 2.13
Ptpre-202ENSMUST00000209256 Slc4a3P16283 1227 aa28.34■■■□□ 2.13
Ptpre-202ENSMUST00000209256 Gtf3c3Q3TMP1 882 aa28.34■■■□□ 2.13
Ptpre-202ENSMUST00000209256 Ipo9Q91YE6 1041 aa28.33■■■□□ 2.13
Ptpre-202ENSMUST00000209256 Magi1Q6RHR9 1471 aa28.32■■■□□ 2.12
Ptpre-202ENSMUST00000209256 Arhgef40Q3UPH7 1517 aa28.29■■■□□ 2.12
Ptpre-202ENSMUST00000209256 Kiaa1551Q5DTW7 1521 aa28.29■■■□□ 2.12
Ptpre-202ENSMUST00000209256 Ccdc9Q8VC31 543 aaKnown RBP28.28■■■□□ 2.12
Ptpre-202ENSMUST00000209256 Prex2Q3LAC4 1598 aa28.28■■■□□ 2.12
Ptpre-202ENSMUST00000209256 Wwc2Q6NXJ0 1187 aa28.27■■■□□ 2.12
Ptpre-202ENSMUST00000209256 Pprc1Q6NZN1 1644 aa28.25■■■□□ 2.11
Ptpre-202ENSMUST00000209256 Gm14025A2AP89 1413 aa28.25■■■□□ 2.11
Ptpre-202ENSMUST00000209256 NrdcQ8BHG1 1161 aa28.23■■■□□ 2.11
Ptpre-202ENSMUST00000209256 Rrbp1Q99PL5 1605 aaKnown RBP28.23■■■□□ 2.11
Ptpre-202ENSMUST00000209256 Abcc1O35379 1528 aa28.23■■■□□ 2.11
Ptpre-202ENSMUST00000209256 Kdm6bQ5NCY0 1641 aa28.23■■■□□ 2.11
Ptpre-202ENSMUST00000209256 Fam163aQ8CAA5 168 aa28.22■■■□□ 2.11
Ptpre-202ENSMUST00000209256 Adcy10Q8C0T9 1614 aa28.22■■■□□ 2.11
Ptpre-202ENSMUST00000209256 Gm13695A2AK44 830 aa28.2■■■□□ 2.11
Ptpre-202ENSMUST00000209256 Exoc6Q8R313 802 aa28.2■■■□□ 2.11
Ptpre-202ENSMUST00000209256 Dhx57Q6P5D3 1388 aaKnown RBP28.2■■■□□ 2.1
Ptpre-202ENSMUST00000209256 Hsp90aa1P07901 733 aaKnown RBP28.2■■■□□ 2.1
Ptpre-202ENSMUST00000209256 Chd1P40201 1711 aa28.2■■■□□ 2.1
Ptpre-202ENSMUST00000209256 Cabp1Q9JLK7 227 aa28.2■■■□□ 2.1
Ptpre-202ENSMUST00000209256 Irx3P81067 507 aa28.19■■■□□ 2.1
Ptpre-202ENSMUST00000209256 Ube2uB1AUC4 352 aa28.17■■■□□ 2.1
Ptpre-202ENSMUST00000209256 Abcc5Q9R1X5 1436 aa28.17■■■□□ 2.1
Ptpre-202ENSMUST00000209256 Mapkbp1Q6NS57 1503 aa28.17■■■□□ 2.1
Ptpre-202ENSMUST00000209256 Cul7Q8VE73 1689 aa28.15■■■□□ 2.1
Ptpre-202ENSMUST00000209256 Plcd4Q8K3R3 807 aa28.15■■■□□ 2.1
Ptpre-202ENSMUST00000209256 Dennd4bQ3U1Y4 1499 aa28.14■■■□□ 2.1
Ptpre-202ENSMUST00000209256 Tcerg1Q8CGF7 1100 aaKnown RBP28.13■■■□□ 2.09
Ptpre-202ENSMUST00000209256 Ncoa1P70365 1447 aa28.13■■■□□ 2.09
Ptpre-202ENSMUST00000209256 Fgd1P52734 960 aa28.12■■■□□ 2.09
Ptpre-202ENSMUST00000209256 Kcnh8P59111 1102 aa28.1■■■□□ 2.09
Ptpre-202ENSMUST00000209256 Plekhh2Q8C115 1491 aa28.1■■■□□ 2.09
Ptpre-202ENSMUST00000209256 PnisrA2AJT4 805 aaKnown RBP28.09■■■□□ 2.09
Ptpre-202ENSMUST00000209256 Fancd2Q80V62 1450 aa28.09■■■□□ 2.09
Ptpre-202ENSMUST00000209256 Tdrd9Q14BI7 1383 aa28.06■■■□□ 2.08
Ptpre-202ENSMUST00000209256 Mtus2Q3UHD3 1353 aa28.05■■■□□ 2.08
Ptpre-202ENSMUST00000209256 Iqcf3Q9D498 203 aa28.03■■■□□ 2.08
Ptpre-202ENSMUST00000209256 Ofd1Q80Z25 1017 aa28■■■□□ 2.07
Ptpre-202ENSMUST00000209256 L3mbtl2P59178 703 aa28■■■□□ 2.07
Ptpre-202ENSMUST00000209256 SphkapQ6NSW3 1687 aa27.99■■■□□ 2.07
Ptpre-202ENSMUST00000209256 Zfp644E9QA22 1323 aa27.97■■■□□ 2.07
Ptpre-202ENSMUST00000209256 Mlh3A0A1Y7VMP7 1443 aa27.97■■■□□ 2.07
Ptpre-202ENSMUST00000209256 Rfx7F8VPJ6 1459 aa27.97■■■□□ 2.07
Ptpre-202ENSMUST00000209256 Fam208aQ69ZR9 1610 aaKnown RBP27.96■■■□□ 2.07
Ptpre-202ENSMUST00000209256 Ythdc2B2RR83 1445 aaKnown RBP27.96■■■□□ 2.07
Ptpre-202ENSMUST00000209256 Adgrb2Q8CGM1 1561 aa27.93■■■□□ 2.06
Ptpre-202ENSMUST00000209256 Fhod3Q76LL6 1578 aa27.93■■■□□ 2.06
Ptpre-202ENSMUST00000209256 NhsB1AV60 1647 aa27.92■■■□□ 2.06
Ptpre-202ENSMUST00000209256 Il16O54824 1322 aa27.9■■■□□ 2.06
Ptpre-202ENSMUST00000209256 Mphosph9A6H5Y1 991 aa27.9■■■□□ 2.06
Ptpre-202ENSMUST00000209256 Kdm3bQ6ZPY7 1562 aa27.89■■■□□ 2.06
Ptpre-202ENSMUST00000209256 Caskin1Q6P9K8 1431 aa27.89■■■□□ 2.06
Ptpre-202ENSMUST00000209256 ChgaP26339 463 aaKnown RBP27.88■■■□□ 2.05
Ptpre-202ENSMUST00000209256 Pabpn1Q8CCS6 302 aaKnown RBP27.88■■■□□ 2.05
Ptpre-202ENSMUST00000209256 Znf608Q56A10 1511 aa27.87■■■□□ 2.05
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms