RNA–Protein interactions for RNA: ENSMUST00000112371.8

Scn1a-204, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn1a, Length 8,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-204ENSMUST00000112371 Safb2Q80YR5 991 aaKnown RBP6.86□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Vps8Q0P5W1 1427 aa6.86□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Ncoa2Q61026 1462 aa6.86□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Top2aQ01320 1528 aaKnown RBP6.86□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Znf326O88291 580 aa6.85□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Wwc2Q6NXJ0 1187 aa6.85□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Rrp12Q6P5B0 1295 aaKnown RBP6.85□□□□□ -1.31
Scn1a-204ENSMUST00000112371 CalrP14211 416 aaKnown RBP6.85□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Kif27Q7M6Z4 1394 aa6.85□□□□□ -1.31
Scn1a-204ENSMUST00000112371 AqrQ8CFQ3 1481 aaKnown RBP6.85□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Kif3aP28741 701 aa6.84□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Gtf3c5Q8R2T8 520 aa6.84□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Erich4Q3UNU4 136 aa6.84□□□□□ -1.32
Scn1a-204ENSMUST00000112371 RdxP26043 583 aaKnown RBP6.83□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Skap1Q3UUV5 355 aa6.83□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Cald1E9QA15 768 aaKnown RBP6.83□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Trap1aP19473 224 aa6.83□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Ppp1r18Q8BQ30 594 aa6.82□□□□□ -1.32
Scn1a-204ENSMUST00000112371 A0A1L1SQF0 893 aa6.82□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Tnnt2P50752 301 aa6.82□□□□□ -1.32
Scn1a-204ENSMUST00000112371 R3hcc1Q8BSI6 488 aa6.82□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Mterf4Q8BVN4 346 aa6.82□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Znf692Q3U381 531 aa6.82□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Mre11Q61216 706 aa6.82□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Hmgb3O54879 200 aaKnown RBP6.81□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Atl3Q91YH5 541 aa6.81□□□□□ -1.32
Scn1a-204ENSMUST00000112371 EspnQ9ET47 871 aa6.81□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Elp1Q7TT37 1333 aaKnown RBP6.81□□□□□ -1.32
Scn1a-204ENSMUST00000112371 ScribQ80U72 1612 aa6.81□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Rwdd1Q9CQK7 243 aa6.81□□□□□ -1.32
Scn1a-204ENSMUST00000112371 SetQ9EQU5 289 aaKnown RBP6.81□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Tubb6Q922F4 447 aa6.81□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Gm45140A0A0N4SUM8 220 aa6.81□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Ipo9Q91YE6 1041 aa6.8□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Ush1cQ9ES64 910 aa6.8□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Fam193aQ8CGI1 1231 aaKnown RBP6.8□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Ccdc173A0JLY1 547 aa6.8□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Kif7B7ZNG0 1348 aa6.8□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Rfx7F8VPJ6 1459 aa6.8□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Hap1O35668 628 aa6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Hsp90b1P08113 802 aaKnown RBP6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Casc1Q6TDU8 730 aa6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 MsnP26041 577 aaKnown RBP6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Mrs2Q5NCE8 434 aa6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 IqubQ8CDK3 788 aa6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Dnai1Q8C0M8 701 aa6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Kif20aP97329 887 aa6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Pdcl3Q8BVF2 240 aa6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Tubb4bP68372 445 aaKnown RBP6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Zscan21Q07231 555 aa6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Peg3Q3URU2 1571 aa6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Becn1O88597 448 aa6.78□□□□□ -1.32
Scn1a-204ENSMUST00000112371 CanxP35564 591 aaKnown RBP6.78□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Tmf1B9EKI3 1091 aa6.78□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Sart3Q9JLI8 962 aaKnown RBP6.78□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Kif15Q6P9L6 1387 aa6.78□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Nsd2Q8BVE8 1365 aa6.78□□□□□ -1.32
Scn1a-204ENSMUST00000112371 EzrP26040 586 aaKnown RBP6.77□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Rsph3aQ3UFY4 516 aa6.77□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Zrsr2Q62377 462 aaKnown RBP6.77□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Hsp90ab1P11499 724 aaKnown RBP6.77□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Ralbp1Q62172 648 aa6.77□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Kif16bB1AVY7 1312 aa6.77□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Pbrm1Q8BSQ9 1634 aaKnown RBP6.77□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Kif3cO35066 796 aa6.77□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Ift140E9PY46 1464 aa6.77□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Smg6P61406 1418 aaKnown RBP6.77□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Ofd1Q80Z25 1017 aa6.77□□□□□ -1.33
Scn1a-204ENSMUST00000112371 NinlQ6ZQ12 1394 aa6.77□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Cavin1O54724 392 aa6.76□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Rrp9Q91WM3 475 aaKnown RBP6.76□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Hs1bp3Q3TC93 395 aa6.76□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Mak16Q8BGS0 296 aaKnown RBP6.76□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Mcm2P97310 904 aa6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Sall2Q9QX96 1004 aa6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 VgfQ0VGU4 617 aa6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Tpm3-rs7D3Z2H9 248 aa6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Plcd4Q8K3R3 807 aa6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Ubl4bQ9CQ84 188 aa6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Shroom4Q1W617 1475 aa6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Ppp4r2Q0VGB7 417 aa6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Synj1Q8CHC4 1574 aa6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 EprsQ8CGC7 1512 aaKnown RBP6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Erich3F6QRE9 1637 aa6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Phldb1Q6PDH0 1371 aaKnown RBP6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Tiam1Q60610 1591 aa6.74□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Iqgap2Q3UQ44 1575 aa6.74□□□□□ -1.33
Scn1a-204ENSMUST00000112371 PnnO35691 725 aaKnown RBP6.74□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Tubb4aQ9D6F9 444 aa6.74□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Fez2Q6TYB5 348 aa6.74□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Cetn4Q8K4K1 168 aa6.74□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Tmc1Q8R4P5 757 aa6.74□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Fam184aE9PW83 1143 aa6.74□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Rock1P70335 1354 aa6.73□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Rangap1P46061 589 aaKnown RBP6.73□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Tpm2P58774 284 aa6.73□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Kiaa1211Q5PR69 1207 aa6.73□□□□□ -1.33
Scn1a-204ENSMUST00000112371 SrrtQ99MR6 875 aaKnown RBP6.73□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Phf14Q9D4H9 881 aa6.73□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Chaf1aQ9QWF0 911 aa6.73□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 90.7 ms