RNA–Protein interactions for RNA: ENSMUST00000112371.8

Scn1a-204, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn1a, Length 8,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-204ENSMUST00000112371 Rpgrip1Q9EPQ2 1331 aa9.48□□□□□ -0.89
Scn1a-204ENSMUST00000112371 Rtl1Q7M732 1744 aa9.4□□□□□ -0.9
Scn1a-204ENSMUST00000112371 Cngb1E1AZ71 1325 aa9.18□□□□□ -0.94
Scn1a-204ENSMUST00000112371 Ccdc180J3QNE4 1664 aa8.86□□□□□ -0.99
Scn1a-204ENSMUST00000112371 Las1lA2BE28 776 aaKnown RBP8.78□□□□□ -1
Scn1a-204ENSMUST00000112371 Myt1Q8CFC2 1127 aa8.67□□□□□ -1.02
Scn1a-204ENSMUST00000112371 Pelp1Q9DBD5 1123 aaKnown RBP8.62□□□□□ -1.03
Scn1a-204ENSMUST00000112371 Rhox8Q6VSS7 320 aa8.57□□□□□ -1.04
Scn1a-204ENSMUST00000112371 NischQ80TM9 1593 aa8.55□□□□□ -1.04
Scn1a-204ENSMUST00000112371 Wdr66E9Q743 1299 aa8.47□□□□□ -1.05
Scn1a-204ENSMUST00000112371 Stra8P70278 393 aa8.36□□□□□ -1.07
Scn1a-204ENSMUST00000112371 Gm35339A0A140LHH9 1649 aa8.26□□□□□ -1.09
Scn1a-204ENSMUST00000112371 NefmP08553 848 aa8.24□□□□□ -1.09
Scn1a-204ENSMUST00000112371 HrcG5E8J6 738 aa8.22□□□□□ -1.09
Scn1a-204ENSMUST00000112371 Trim41Q5NCC3 630 aa8.21□□□□□ -1.1
Scn1a-204ENSMUST00000112371 Neurod1Q60867 357 aa8.17□□□□□ -1.1
Scn1a-204ENSMUST00000112371 Rtl5Q5DTT4 599 aa8.17□□□□□ -1.1
Scn1a-204ENSMUST00000112371 Abcc9P70170 1546 aa8.16□□□□□ -1.1
Scn1a-204ENSMUST00000112371 Tnnt3Q9QZ47 272 aa8.04□□□□□ -1.12
Scn1a-204ENSMUST00000112371 Acin1Q9JIX8 1338 aaKnown RBP8.04□□□□□ -1.12
Scn1a-204ENSMUST00000112371 CenpbP27790 599 aa8.03□□□□□ -1.12
Scn1a-204ENSMUST00000112371 Ccdc9Q8VC31 543 aaKnown RBP7.93□□□□□ -1.14
Scn1a-204ENSMUST00000112371 Dcaf1Q80TR8 1506 aa7.91□□□□□ -1.14
Scn1a-204ENSMUST00000112371 Hdac5Q9Z2V6 1113 aa7.89□□□□□ -1.15
Scn1a-204ENSMUST00000112371 Anp32bQ9EST5 272 aaKnown RBP7.82□□□□□ -1.16
Scn1a-204ENSMUST00000112371 Abcc8B2RUS7 1588 aa7.79□□□□□ -1.16
Scn1a-204ENSMUST00000112371 Eif5bQ05D44 1216 aaKnown RBP7.79□□□□□ -1.16
Scn1a-204ENSMUST00000112371 4930567H17RikQ3V0K5 233 aa7.78□□□□□ -1.16
Scn1a-204ENSMUST00000112371 Ccer2J3QPU5 274 aa7.73□□□□□ -1.17
Scn1a-204ENSMUST00000112371 Esf1Q3V1V3 845 aaKnown RBP7.72□□□□□ -1.17
Scn1a-204ENSMUST00000112371 Brd4Q9ESU6 1400 aaKnown RBP7.71□□□□□ -1.17
Scn1a-204ENSMUST00000112371 Supt5hO55201 1082 aaKnown RBP7.7□□□□□ -1.18
Scn1a-204ENSMUST00000112371 Ttbk1Q6PCN3 1308 aa7.67□□□□□ -1.18
Scn1a-204ENSMUST00000112371 Cep164Q5DU05 1446 aa7.67□□□□□ -1.18
Scn1a-204ENSMUST00000112371 Crybg2B7ZCC2 1516 aa7.66□□□□□ -1.18
Scn1a-204ENSMUST00000112371 Zeb1Q64318 1117 aa7.65□□□□□ -1.18
Scn1a-204ENSMUST00000112371 Cdk11bP24788 784 aaKnown RBP7.63□□□□□ -1.19
Scn1a-204ENSMUST00000112371 NeflP08551 543 aa7.61□□□□□ -1.19
Scn1a-204ENSMUST00000112371 Arid4bA2CG63 1314 aaKnown RBP7.61□□□□□ -1.19
Scn1a-204ENSMUST00000112371 Amer1Q7TS75 1132 aa7.61□□□□□ -1.19
Scn1a-204ENSMUST00000112371 Upf2A2AT37 1269 aaKnown RBP7.61□□□□□ -1.19
Scn1a-204ENSMUST00000112371 Ube2uB1AUC4 352 aa7.59□□□□□ -1.19
Scn1a-204ENSMUST00000112371 Rb1cc1Q9ESK9 1588 aa7.59□□□□□ -1.2
Scn1a-204ENSMUST00000112371 Baz1aO88379 1555 aa7.56□□□□□ -1.2
Scn1a-204ENSMUST00000112371 Smarca2Q6DIC0 1577 aa7.55□□□□□ -1.2
Scn1a-204ENSMUST00000112371 Myt1lP97500 1187 aa7.54□□□□□ -1.2
Scn1a-204ENSMUST00000112371 Npm2Q80W85 207 aa7.51□□□□□ -1.21
Scn1a-204ENSMUST00000112371 ClspnQ80YR7 1315 aa7.51□□□□□ -1.21
Scn1a-204ENSMUST00000112371 NrdcQ8BHG1 1161 aa7.5□□□□□ -1.21
Scn1a-204ENSMUST00000112371 NacadQ5SWP3 1504 aa7.48□□□□□ -1.21
Scn1a-204ENSMUST00000112371 Zfp777B9EKF4 885 aa7.47□□□□□ -1.21
Scn1a-204ENSMUST00000112371 Ehmt2Q9Z148 1263 aaKnown RBP7.47□□□□□ -1.21
Scn1a-204ENSMUST00000112371 Eea1Q8BL66 1411 aa7.47□□□□□ -1.21
Scn1a-204ENSMUST00000112371 Aplp2Q06335 707 aa7.46□□□□□ -1.22
Scn1a-204ENSMUST00000112371 Ccdc136Q3TVA9 1136 aa7.46□□□□□ -1.22
Scn1a-204ENSMUST00000112371 Anp32aO35381 247 aa7.45□□□□□ -1.22
Scn1a-204ENSMUST00000112371 Nop58Q6DFW4 536 aaKnown RBP7.44□□□□□ -1.22
Scn1a-204ENSMUST00000112371 NclP09405 707 aaKnown RBP7.42□□□□□ -1.22
Scn1a-204ENSMUST00000112371 Zcchc6Q5BLK4 1491 aaKnown RBP7.41□□□□□ -1.22
Scn1a-204ENSMUST00000112371 TonslQ6NZL6 1363 aa7.41□□□□□ -1.22
Scn1a-204ENSMUST00000112371 Pcgf6Q99NA9 353 aa7.4□□□□□ -1.22
Scn1a-204ENSMUST00000112371 4933402E13RikQ9D4D2 429 aa7.4□□□□□ -1.22
Scn1a-204ENSMUST00000112371 Anks4bQ8K3X6 423 aa7.4□□□□□ -1.23
Scn1a-204ENSMUST00000112371 Hoxa7P02830 229 aa7.39□□□□□ -1.23
Scn1a-204ENSMUST00000112371 Ythdc1E9Q5K9 736 aaKnown RBP7.38□□□□□ -1.23
Scn1a-204ENSMUST00000112371 DiexfQ8BTT6 772 aaKnown RBP7.37□□□□□ -1.23
Scn1a-204ENSMUST00000112371 AampJ3QN89 436 aa7.36□□□□□ -1.23
Scn1a-204ENSMUST00000112371 Chmp4bQ9D8B3 224 aaKnown RBP7.34□□□□□ -1.23
Scn1a-204ENSMUST00000112371 Mbd3Q9Z2D8 285 aaKnown RBP7.34□□□□□ -1.24
Scn1a-204ENSMUST00000112371 Mia2Q91ZV0 1396 aa7.34□□□□□ -1.24
Scn1a-204ENSMUST00000112371 Clstn2Q9ER65 966 aa7.32□□□□□ -1.24
Scn1a-204ENSMUST00000112371 PtmsQ9D0J8 101 aaKnown RBP7.32□□□□□ -1.24
Scn1a-204ENSMUST00000112371 Baz1bQ9Z277 1479 aa7.32□□□□□ -1.24
Scn1a-204ENSMUST00000112371 Adam1bQ8R534 806 aa7.31□□□□□ -1.24
Scn1a-204ENSMUST00000112371 Gab3Q8BSM5 595 aa7.31□□□□□ -1.24
Scn1a-204ENSMUST00000112371 Ccdc18Q640L5 1455 aa7.3□□□□□ -1.24
Scn1a-204ENSMUST00000112371 Polr1aO35134 1717 aaKnown RBP7.29□□□□□ -1.24
Scn1a-204ENSMUST00000112371 Clip1Q922J3 1391 aa7.28□□□□□ -1.24
Scn1a-204ENSMUST00000112371 Golga3P55937 1487 aa7.27□□□□□ -1.25
Scn1a-204ENSMUST00000112371 Htatsf1Q8BGC0 757 aa7.25□□□□□ -1.25
Scn1a-204ENSMUST00000112371 Cwc22Q8C5N3 908 aaKnown RBP7.24□□□□□ -1.25
Scn1a-204ENSMUST00000112371 Fkbp15Q6P9Q6 1216 aaKnown RBP7.24□□□□□ -1.25
Scn1a-204ENSMUST00000112371 Cttnbp2B9EJA2 1648 aa7.23□□□□□ -1.25
Scn1a-204ENSMUST00000112371 Il27Q8K3I6 234 aa7.23□□□□□ -1.25
Scn1a-204ENSMUST00000112371 4933416C03RikQ3V063 378 aa7.2□□□□□ -1.26
Scn1a-204ENSMUST00000112371 Fmn1Q05860 1466 aa7.2□□□□□ -1.26
Scn1a-204ENSMUST00000112371 Rock2P70336 1388 aa7.19□□□□□ -1.26
Scn1a-204ENSMUST00000112371 Pde3bQ61409 1100 aa7.18□□□□□ -1.26
Scn1a-204ENSMUST00000112371 Rpap1Q80TE0 1409 aa7.15□□□□□ -1.26
Scn1a-204ENSMUST00000112371 Ppm1gQ61074 542 aa7.15□□□□□ -1.26
Scn1a-204ENSMUST00000112371 UbtfP25976 765 aaKnown RBP7.15□□□□□ -1.26
Scn1a-204ENSMUST00000112371 Rsph4aQ8BYM7 716 aa7.14□□□□□ -1.27
Scn1a-204ENSMUST00000112371 Ccdc27Q3V036 639 aa7.14□□□□□ -1.27
Scn1a-204ENSMUST00000112371 Rsf1E9PWW9 1441 aaKnown RBP7.14□□□□□ -1.27
Scn1a-204ENSMUST00000112371 Erich6D3Z6S9 713 aa7.13□□□□□ -1.27
Scn1a-204ENSMUST00000112371 Cux2P70298 1426 aa7.13□□□□□ -1.27
Scn1a-204ENSMUST00000112371 Cux1P53564 1515 aa7.13□□□□□ -1.27
Scn1a-204ENSMUST00000112371 Glipr1l2Q9CQ35 332 aa7.13□□□□□ -1.27
Scn1a-204ENSMUST00000112371 Ankrd36D3Z4K0 1415 aa7.12□□□□□ -1.27
Scn1a-204ENSMUST00000112371 Stard8Q8K031 1019 aa7.12□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 129.7 ms