RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 UacaQ8CGB3 1411 aa14.84□□□□□ -0.03
Trim9-202ENSMUST00000110522 Slc4a3P16283 1227 aa14.84□□□□□ -0.03
Trim9-202ENSMUST00000110522 Top2bQ64511 1612 aa14.84□□□□□ -0.03
Trim9-202ENSMUST00000110522 Ecm2Q5FW85 670 aa14.83□□□□□ -0.04
Trim9-202ENSMUST00000110522 Ppp1r18Q8BQ30 594 aa14.83□□□□□ -0.04
Trim9-202ENSMUST00000110522 Jph4Q80WT0 628 aa14.82□□□□□ -0.04
Trim9-202ENSMUST00000110522 PogzQ8BZH4 1409 aaKnown RBP14.81□□□□□ -0.04
Trim9-202ENSMUST00000110522 Stk26Q99JT2 416 aa14.81□□□□□ -0.04
Trim9-202ENSMUST00000110522 Mroh2bQ7M6Y6 1581 aa14.8□□□□□ -0.04
Trim9-202ENSMUST00000110522 Urb2E9Q7L1 1524 aaKnown RBP14.8□□□□□ -0.04
Trim9-202ENSMUST00000110522 Cc2d2bA0A286YDU8 1405 aa14.79□□□□□ -0.04
Trim9-202ENSMUST00000110522 NgefQ8CHT1 710 aa14.78□□□□□ -0.04
Trim9-202ENSMUST00000110522 Gtf2e1Q9D0D5 440 aa14.78□□□□□ -0.04
Trim9-202ENSMUST00000110522 Ncapd3Q6ZQK0 1506 aa14.76□□□□□ -0.05
Trim9-202ENSMUST00000110522 Srcin1Q9QWI6 1250 aa14.76□□□□□ -0.05
Trim9-202ENSMUST00000110522 Irx6Q9ER75 438 aa14.75□□□□□ -0.05
Trim9-202ENSMUST00000110522 Fhad1A6PWD2 1420 aa14.75□□□□□ -0.05
Trim9-202ENSMUST00000110522 Trim30dE9PWL0 497 aa14.75□□□□□ -0.05
Trim9-202ENSMUST00000110522 Zscan21Q07231 555 aa14.75□□□□□ -0.05
Trim9-202ENSMUST00000110522 Dbr1Q923B1 550 aa14.74□□□□□ -0.05
Trim9-202ENSMUST00000110522 Arhgef5E9Q7D5 1581 aa14.74□□□□□ -0.05
Trim9-202ENSMUST00000110522 Wdr62Q3U3T8 1523 aa14.74□□□□□ -0.05
Trim9-202ENSMUST00000110522 Map3k1P53349 1493 aa14.73□□□□□ -0.05
Trim9-202ENSMUST00000110522 Slc4a1apE9PX68 744 aa14.72□□□□□ -0.05
Trim9-202ENSMUST00000110522 Tmf1B9EKI3 1091 aa14.72□□□□□ -0.05
Trim9-202ENSMUST00000110522 Fan1Q69ZT1 1020 aa14.72□□□□□ -0.05
Trim9-202ENSMUST00000110522 Dcaf11Q91VU6 549 aa14.72□□□□□ -0.05
Trim9-202ENSMUST00000110522 Rock2P70336 1388 aa14.71□□□□□ -0.05
Trim9-202ENSMUST00000110522 Soga1E1U8D0 1418 aa14.7□□□□□ -0.06
Trim9-202ENSMUST00000110522 MyclP10166 368 aa14.7□□□□□ -0.06
Trim9-202ENSMUST00000110522 B4galnt3Q6L8S8 986 aa14.7□□□□□ -0.06
Trim9-202ENSMUST00000110522 Smg6P61406 1418 aaKnown RBP14.69□□□□□ -0.06
Trim9-202ENSMUST00000110522 Mapk8ip3Q9ESN9 1337 aa14.69□□□□□ -0.06
Trim9-202ENSMUST00000110522 Spag9Q58A65 1321 aaKnown RBP14.69□□□□□ -0.06
Trim9-202ENSMUST00000110522 CanxP35564 591 aaKnown RBP14.69□□□□□ -0.06
Trim9-202ENSMUST00000110522 Speer4f1Q9D5Q6 258 aa14.69□□□□□ -0.06
Trim9-202ENSMUST00000110522 Gm7298A0A0N4SVU1 1476 aa14.69□□□□□ -0.06
Trim9-202ENSMUST00000110522 Camsap1A2AHC3 1581 aa14.69□□□□□ -0.06
Trim9-202ENSMUST00000110522 Armcx1Q9CX83 456 aa14.68□□□□□ -0.06
Trim9-202ENSMUST00000110522 Gm6268A2A3U9 297 aa14.68□□□□□ -0.06
Trim9-202ENSMUST00000110522 Mak16Q8BGS0 296 aaKnown RBP14.67□□□□□ -0.06
Trim9-202ENSMUST00000110522 Dnajc5bQ9CQ94 199 aa14.67□□□□□ -0.06
Trim9-202ENSMUST00000110522 Fgd1P52734 960 aa14.67□□□□□ -0.06
Trim9-202ENSMUST00000110522 CadpsQ80TJ1 1355 aa14.67□□□□□ -0.06
Trim9-202ENSMUST00000110522 Pank3Q8R2W9 370 aa14.66□□□□□ -0.06
Trim9-202ENSMUST00000110522 Arhgap31A6X8Z5 1425 aa14.66□□□□□ -0.06
Trim9-202ENSMUST00000110522 Mrc2Q64449 1479 aa14.66□□□□□ -0.06
Trim9-202ENSMUST00000110522 Vps8Q0P5W1 1427 aa14.66□□□□□ -0.06
Trim9-202ENSMUST00000110522 Plb1Q3TTY0 1478 aa14.66□□□□□ -0.06
Trim9-202ENSMUST00000110522 1700019A02RikA0A087WPV9 146 aa14.65□□□□□ -0.06
Trim9-202ENSMUST00000110522 Dapk1Q80YE7 1442 aa14.65□□□□□ -0.06
Trim9-202ENSMUST00000110522 Plin1Q8CGN5 517 aa14.65□□□□□ -0.06
Trim9-202ENSMUST00000110522 EprsQ8CGC7 1512 aaKnown RBP14.64□□□□□ -0.07
Trim9-202ENSMUST00000110522 CrbnQ8C7D2 445 aa14.64□□□□□ -0.07
Trim9-202ENSMUST00000110522 Inpp5dQ9ES52 1191 aa14.64□□□□□ -0.07
Trim9-202ENSMUST00000110522 Ankrd36D3Z4K0 1415 aa14.64□□□□□ -0.07
Trim9-202ENSMUST00000110522 Polr1aO35134 1717 aaKnown RBP14.64□□□□□ -0.07
Trim9-202ENSMUST00000110522 Cux1P53564 1515 aa14.63□□□□□ -0.07
Trim9-202ENSMUST00000110522 Znf316Q6PGE4 1016 aa14.63□□□□□ -0.07
Trim9-202ENSMUST00000110522 Tiam1Q60610 1591 aa14.63□□□□□ -0.07
Trim9-202ENSMUST00000110522 Hsp90ab1P11499 724 aaKnown RBP14.62□□□□□ -0.07
Trim9-202ENSMUST00000110522 Supt16hQ920B9 1047 aa14.62□□□□□ -0.07
Trim9-202ENSMUST00000110522 Rwdd1Q9CQK7 243 aa14.62□□□□□ -0.07
Trim9-202ENSMUST00000110522 AqrQ8CFQ3 1481 aaKnown RBP14.62□□□□□ -0.07
Trim9-202ENSMUST00000110522 U2af1Q9D883 239 aaKnown RBP14.61□□□□□ -0.07
Trim9-202ENSMUST00000110522 DiexfQ8BTT6 772 aaKnown RBP14.61□□□□□ -0.07
Trim9-202ENSMUST00000110522 Arid4bA2CG63 1314 aaKnown RBP14.6□□□□□ -0.07
Trim9-202ENSMUST00000110522 Ift140E9PY46 1464 aa14.6□□□□□ -0.07
Trim9-202ENSMUST00000110522 Ncoa2Q61026 1462 aa14.6□□□□□ -0.07
Trim9-202ENSMUST00000110522 Lamc3Q9R0B6 1581 aa14.59□□□□□ -0.07
Trim9-202ENSMUST00000110522 Senp3Q9EP97 568 aaKnown RBP14.59□□□□□ -0.07
Trim9-202ENSMUST00000110522 Birc3O08863 600 aa14.58□□□□□ -0.08
Trim9-202ENSMUST00000110522 4930567H17RikQ3V0K5 233 aa14.58□□□□□ -0.08
Trim9-202ENSMUST00000110522 Golga2Q921M4 999 aa14.58□□□□□ -0.08
Trim9-202ENSMUST00000110522 Map3k5O35099 1380 aa14.57□□□□□ -0.08
Trim9-202ENSMUST00000110522 Ttll5Q8CHB8 1328 aa14.57□□□□□ -0.08
Trim9-202ENSMUST00000110522 Pde4cQ3UEI1 686 aa14.57□□□□□ -0.08
Trim9-202ENSMUST00000110522 Txndc2Q6P902 515 aa14.57□□□□□ -0.08
Trim9-202ENSMUST00000110522 Pabpn1Q8CCS6 302 aaKnown RBP14.57□□□□□ -0.08
Trim9-202ENSMUST00000110522 Usp40Q8BWR4 1235 aa14.56□□□□□ -0.08
Trim9-202ENSMUST00000110522 Dhx9O70133 1380 aaKnown RBP14.56□□□□□ -0.08
Trim9-202ENSMUST00000110522 Utp14aQ640M1 767 aaKnown RBP14.54□□□□□ -0.08
Trim9-202ENSMUST00000110522 Tcerg1Q8CGF7 1100 aaKnown RBP14.54□□□□□ -0.08
Trim9-202ENSMUST00000110522 Nolc1E9Q5C9 702 aaKnown RBP14.53□□□□□ -0.08
Trim9-202ENSMUST00000110522 Chmp5Q9D7S9 219 aa14.53□□□□□ -0.08
Trim9-202ENSMUST00000110522 Psme1P97371 249 aa14.53□□□□□ -0.08
Trim9-202ENSMUST00000110522 Vsig10D3YX43 558 aa14.53□□□□□ -0.08
Trim9-202ENSMUST00000110522 Esx1O88933 382 aa14.52□□□□□ -0.08
Trim9-202ENSMUST00000110522 Pcf11G3X9Z4 1553 aa14.51□□□□□ -0.09
Trim9-202ENSMUST00000110522 Sox12Q04890 314 aa14.51□□□□□ -0.09
Trim9-202ENSMUST00000110522 Fam184bQ0KK56 942 aa14.51□□□□□ -0.09
Trim9-202ENSMUST00000110522 U2surpQ6NV83 1029 aaKnown RBP14.51□□□□□ -0.09
Trim9-202ENSMUST00000110522 Znf710Q3U288 666 aa14.5□□□□□ -0.09
Trim9-202ENSMUST00000110522 Rpgrip1lQ8CG73 1264 aa14.5□□□□□ -0.09
Trim9-202ENSMUST00000110522 Fgd6Q69ZL1 1399 aa14.5□□□□□ -0.09
Trim9-202ENSMUST00000110522 Fam163aQ8CAA5 168 aa14.5□□□□□ -0.09
Trim9-202ENSMUST00000110522 Zscan10Q3URR7 782 aa14.5□□□□□ -0.09
Trim9-202ENSMUST00000110522 Tmco5bQ80X59 307 aa14.5□□□□□ -0.09
Trim9-202ENSMUST00000110522 Znf330Q922H9 316 aa14.49□□□□□ -0.09
Trim9-202ENSMUST00000110522 NudcO35685 332 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms