RNA–Protein interactions for RNA: ENSMUST00000045312.5

Smc1a-201, Transcript of Structural maintenance of chromosomes protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1a, Length 4,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1a-201ENSMUST00000045312 Casc1Q6TDU8 730 aa9.05□□□□□ -0.96
Smc1a-201ENSMUST00000045312 Znf326O88291 580 aa9.04□□□□□ -0.96
Smc1a-201ENSMUST00000045312 Adam1bQ8R534 806 aa9.04□□□□□ -0.96
Smc1a-201ENSMUST00000045312 Mtus2Q3UHD3 1353 aa9.04□□□□□ -0.96
Smc1a-201ENSMUST00000045312 Baz1bQ9Z277 1479 aa9.04□□□□□ -0.96
Smc1a-201ENSMUST00000045312 Ipo8Q7TMY7 1010 aa9.04□□□□□ -0.96
Smc1a-201ENSMUST00000045312 Rwdd1Q9CQK7 243 aa9.03□□□□□ -0.96
Smc1a-201ENSMUST00000045312 Carmil1Q6EDY6 1374 aa9.03□□□□□ -0.96
Smc1a-201ENSMUST00000045312 LrpprcQ6PB66 1392 aaKnown RBP9.03□□□□□ -0.96
Smc1a-201ENSMUST00000045312 Mbd3Q9Z2D8 285 aaKnown RBP9.02□□□□□ -0.96
Smc1a-201ENSMUST00000045312 Aebp1Q640N1 1128 aa9.02□□□□□ -0.97
Smc1a-201ENSMUST00000045312 CntlnA2AM05 1397 aa9.02□□□□□ -0.97
Smc1a-201ENSMUST00000045312 Znf710Q3U288 666 aa9.02□□□□□ -0.97
Smc1a-201ENSMUST00000045312 Grwd1Q810D6 446 aaKnown RBP9.02□□□□□ -0.97
Smc1a-201ENSMUST00000045312 4933402E13RikQ9D4D2 429 aa9.01□□□□□ -0.97
Smc1a-201ENSMUST00000045312 Fyco1Q8VDC1 1437 aa9.01□□□□□ -0.97
Smc1a-201ENSMUST00000045312 Rapgef2Q8CHG7 1496 aa9□□□□□ -0.97
Smc1a-201ENSMUST00000045312 Rrp9Q91WM3 475 aaKnown RBP9□□□□□ -0.97
Smc1a-201ENSMUST00000045312 Mre11Q61216 706 aa9□□□□□ -0.97
Smc1a-201ENSMUST00000045312 Podxl2Q8CAE9 603 aa9□□□□□ -0.97
Smc1a-201ENSMUST00000045312 Kiaa0754Q69ZZ9 979 aa8.99□□□□□ -0.97
Smc1a-201ENSMUST00000045312 Map7O88735 730 aa8.99□□□□□ -0.97
Smc1a-201ENSMUST00000045312 Card11Q8CIS0 1159 aa8.99□□□□□ -0.97
Smc1a-201ENSMUST00000045312 Cwc22Q8C5N3 908 aaKnown RBP8.99□□□□□ -0.97
Smc1a-201ENSMUST00000045312 Becn1O88597 448 aa8.98□□□□□ -0.97
Smc1a-201ENSMUST00000045312 Gpatch11Q3UFS4 262 aa8.98□□□□□ -0.97
Smc1a-201ENSMUST00000045312 Rpap1Q80TE0 1409 aa8.98□□□□□ -0.97
Smc1a-201ENSMUST00000045312 Gtf2a1Q99PM3 378 aa8.98□□□□□ -0.97
Smc1a-201ENSMUST00000045312 Ush1cQ9ES64 910 aa8.98□□□□□ -0.97
Smc1a-201ENSMUST00000045312 Dhx29Q6PGC1 1365 aaKnown RBP8.97□□□□□ -0.97
Smc1a-201ENSMUST00000045312 BccipQ9CWI3 316 aa8.96□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Mfap1aC0HKD8 439 aaKnown RBP8.95□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Mfap1bC0HKD9 439 aaKnown RBP8.95□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Rrp7aQ9D1C9 280 aaKnown RBP8.95□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Eif2s2Q99L45 331 aaKnown RBP8.95□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Iqcf3Q9D498 203 aa8.94□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Dhx57Q6P5D3 1388 aaKnown RBP8.94□□□□□ -0.98
Smc1a-201ENSMUST00000045312 AknaQ80VW7 1404 aa8.94□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Map7d2A2AG50 781 aa8.94□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Pcmtd1P59913 357 aa8.94□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Arhgap35Q91YM2 1499 aa8.93□□□□□ -0.98
Smc1a-201ENSMUST00000045312 NudcO35685 332 aaKnown RBP8.93□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Plppr3Q7TPB0 716 aa8.93□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Safb2Q80YR5 991 aaKnown RBP8.93□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Trim30aP15533 496 aa8.93□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Zscan21Q07231 555 aa8.93□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Mak16Q8BGS0 296 aaKnown RBP8.93□□□□□ -0.98
Smc1a-201ENSMUST00000045312 KnstrnQ9D9Z1 312 aaKnown RBP8.93□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Mapk8ip3Q9ESN9 1337 aa8.93□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Cluap1Q8R3P7 413 aa8.92□□□□□ -0.98
Smc1a-201ENSMUST00000045312 TimelessQ9R1X4 1197 aa8.92□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Gm973E9Q295 1059 aa8.91□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Rbm10Q99KG3 930 aaKnown RBP8.91□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Speer4f1Q9D5Q6 258 aa8.91□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Efcab5A0JP43 1406 aa8.91□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Smg6P61406 1418 aaKnown RBP8.91□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Mroh3A0A1D5RM54 893 aa8.91□□□□□ -0.98
Smc1a-201ENSMUST00000045312 BicraF8VPZ9 1578 aa8.9□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Calcoco2A2A6M5 331 aa8.9□□□□□ -0.98
Smc1a-201ENSMUST00000045312 Stard8Q8K031 1019 aa8.9□□□□□ -0.98
Smc1a-201ENSMUST00000045312 GorabQ8BRM2 368 aa8.89□□□□□ -0.99
Smc1a-201ENSMUST00000045312 DmtnQ9WV69 405 aa8.89□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Top2aQ01320 1528 aaKnown RBP8.89□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Shroom4Q1W617 1475 aa8.89□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Fam43aQ8BUP8 424 aa8.89□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Samd1D3YXK1 519 aa8.88□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Ak7Q9D2H2 614 aa8.88□□□□□ -0.99
Smc1a-201ENSMUST00000045312 RdxP26043 583 aaKnown RBP8.87□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Gtf3c5Q8R2T8 520 aa8.87□□□□□ -0.99
Smc1a-201ENSMUST00000045312 PtmsQ9D0J8 101 aaKnown RBP8.87□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Fhad1A6PWD2 1420 aa8.87□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Srpk2O54781 681 aaKnown RBP8.87□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Map4P27546 1125 aaKnown RBP8.87□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Tpm2P58774 284 aa8.87□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Kdm2aP59997 1161 aa8.87□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Cc2d2aQ8CFW7 1633 aa8.87□□□□□ -0.99
Smc1a-201ENSMUST00000045312 IqubQ8CDK3 788 aa8.87□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Hsp90b1P08113 802 aaKnown RBP8.86□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Fam13bQ8K2H3 851 aa8.86□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Pkd2O35245 966 aa8.86□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Cabp1Q9JLK7 227 aa8.86□□□□□ -0.99
Smc1a-201ENSMUST00000045312 NrkQ9R0G8 1455 aa8.85□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Frmpd1A2AKB4 1549 aa8.85□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Rundc1Q0VDN7 615 aa8.85□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Paxip1Q6NZQ4 1056 aa8.85□□□□□ -0.99
Smc1a-201ENSMUST00000045312 CrbnQ8C7D2 445 aa8.85□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Washc2Q6PGL7 1334 aa8.85□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Ttll13A4Q9F6 804 aa8.85□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Phf14Q9D4H9 881 aa8.85□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Rfx1P48377 963 aa8.84□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Rsph3aQ3UFY4 516 aa8.84□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Gm20521D3Z5F7 333 aa8.84□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Plekhh2Q8C115 1491 aa8.84□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Polr1aO35134 1717 aaKnown RBP8.84□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Lemd3Q9WU40 921 aa8.84□□□□□ -0.99
Smc1a-201ENSMUST00000045312 UacaQ8CGB3 1411 aa8.84□□□□□ -0.99
Smc1a-201ENSMUST00000045312 Tomm22Q9CPQ3 142 aa8.83□□□□□ -1
Smc1a-201ENSMUST00000045312 Ccnb3Q810T2 1396 aa8.83□□□□□ -1
Smc1a-201ENSMUST00000045312 Mphosph9A6H5Y1 991 aa8.82□□□□□ -1
Smc1a-201ENSMUST00000045312 CgnP59242 1191 aa8.82□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 46.3 ms