RNA–Protein interactions for RNA: ENSMUST00000045312.5

Smc1a-201, Transcript of Structural maintenance of chromosomes protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1a, Length 4,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1a-201ENSMUST00000045312 Rhox8Q6VSS7 320 aa12.01□□□□□ -0.49
Smc1a-201ENSMUST00000045312 Rpgrip1Q9EPQ2 1331 aa11.88□□□□□ -0.51
Smc1a-201ENSMUST00000045312 Ehmt2Q9Z148 1263 aaKnown RBP11.55□□□□□ -0.56
Smc1a-201ENSMUST00000045312 Las1lA2BE28 776 aaKnown RBP11.53□□□□□ -0.56
Smc1a-201ENSMUST00000045312 NischQ80TM9 1593 aa11.36□□□□□ -0.59
Smc1a-201ENSMUST00000045312 Cngb1E1AZ71 1325 aa11.3□□□□□ -0.6
Smc1a-201ENSMUST00000045312 Zeb1Q64318 1117 aa11.11□□□□□ -0.63
Smc1a-201ENSMUST00000045312 Wdr66E9Q743 1299 aa11.06□□□□□ -0.64
Smc1a-201ENSMUST00000045312 Acin1Q9JIX8 1338 aaKnown RBP11.04□□□□□ -0.64
Smc1a-201ENSMUST00000045312 CenpbP27790 599 aa11.02□□□□□ -0.65
Smc1a-201ENSMUST00000045312 Pcgf6Q99NA9 353 aa10.97□□□□□ -0.65
Smc1a-201ENSMUST00000045312 Pelp1Q9DBD5 1123 aaKnown RBP10.95□□□□□ -0.66
Smc1a-201ENSMUST00000045312 Myt1Q8CFC2 1127 aa10.85□□□□□ -0.67
Smc1a-201ENSMUST00000045312 Amer1Q7TS75 1132 aa10.84□□□□□ -0.67
Smc1a-201ENSMUST00000045312 Ccdc136Q3TVA9 1136 aa10.74□□□□□ -0.69
Smc1a-201ENSMUST00000045312 Abcc9P70170 1546 aa10.73□□□□□ -0.69
Smc1a-201ENSMUST00000045312 DiexfQ8BTT6 772 aaKnown RBP10.72□□□□□ -0.69
Smc1a-201ENSMUST00000045312 Supt5hO55201 1082 aaKnown RBP10.66□□□□□ -0.7
Smc1a-201ENSMUST00000045312 Trim41Q5NCC3 630 aa10.66□□□□□ -0.7
Smc1a-201ENSMUST00000045312 Esf1Q3V1V3 845 aaKnown RBP10.63□□□□□ -0.71
Smc1a-201ENSMUST00000045312 Ttbk1Q6PCN3 1308 aa10.62□□□□□ -0.71
Smc1a-201ENSMUST00000045312 Gab3Q8BSM5 595 aa10.61□□□□□ -0.71
Smc1a-201ENSMUST00000045312 Cdk11bP24788 784 aaKnown RBP10.61□□□□□ -0.71
Smc1a-201ENSMUST00000045312 NefmP08553 848 aa10.6□□□□□ -0.71
Smc1a-201ENSMUST00000045312 Abcc8B2RUS7 1588 aa10.52□□□□□ -0.73
Smc1a-201ENSMUST00000045312 Neurod1Q60867 357 aa10.5□□□□□ -0.73
Smc1a-201ENSMUST00000045312 Nop58Q6DFW4 536 aaKnown RBP10.49□□□□□ -0.73
Smc1a-201ENSMUST00000045312 Ppargc1bQ8VHJ7 1014 aa10.43□□□□□ -0.74
Smc1a-201ENSMUST00000045312 Rtl1Q7M732 1744 aa10.41□□□□□ -0.74
Smc1a-201ENSMUST00000045312 Slc24a1Q91WD8 1130 aa10.4□□□□□ -0.74
Smc1a-201ENSMUST00000045312 UbtfP25976 765 aaKnown RBP10.39□□□□□ -0.75
Smc1a-201ENSMUST00000045312 Ccdc180J3QNE4 1664 aa10.38□□□□□ -0.75
Smc1a-201ENSMUST00000045312 Stra8P70278 393 aa10.37□□□□□ -0.75
Smc1a-201ENSMUST00000045312 Ube2uB1AUC4 352 aa10.37□□□□□ -0.75
Smc1a-201ENSMUST00000045312 4933416C03RikQ3V063 378 aa10.37□□□□□ -0.75
Smc1a-201ENSMUST00000045312 Gm35339A0A140LHH9 1649 aa10.36□□□□□ -0.75
Smc1a-201ENSMUST00000045312 Csrnp3P59055 597 aa10.35□□□□□ -0.75
Smc1a-201ENSMUST00000045312 Gm38655A0A286YDK6 273 aa10.34□□□□□ -0.75
Smc1a-201ENSMUST00000045312 Tnnt3Q9QZ47 272 aa10.33□□□□□ -0.76
Smc1a-201ENSMUST00000045312 Npm2Q80W85 207 aa10.3□□□□□ -0.76
Smc1a-201ENSMUST00000045312 Myt1lP97500 1187 aa10.29□□□□□ -0.76
Smc1a-201ENSMUST00000045312 Zcchc6Q5BLK4 1491 aaKnown RBP10.28□□□□□ -0.76
Smc1a-201ENSMUST00000045312 HrcG5E8J6 738 aa10.28□□□□□ -0.76
Smc1a-201ENSMUST00000045312 Anks4bQ8K3X6 423 aa10.24□□□□□ -0.77
Smc1a-201ENSMUST00000045312 Rtl5Q5DTT4 599 aa10.24□□□□□ -0.77
Smc1a-201ENSMUST00000045312 Aplp2Q06335 707 aa10.21□□□□□ -0.78
Smc1a-201ENSMUST00000045312 1700123L14RikQ3V2K7 440 aa10.21□□□□□ -0.78
Smc1a-201ENSMUST00000045312 4930567H17RikQ3V0K5 233 aa10.19□□□□□ -0.78
Smc1a-201ENSMUST00000045312 Sall2Q9QX96 1004 aa10.16□□□□□ -0.78
Smc1a-201ENSMUST00000045312 Eif5bQ05D44 1216 aaKnown RBP10.15□□□□□ -0.78
Smc1a-201ENSMUST00000045312 Anp32aO35381 247 aa10.13□□□□□ -0.79
Smc1a-201ENSMUST00000045312 Mier1Q5UAK0 511 aa10.12□□□□□ -0.79
Smc1a-201ENSMUST00000045312 Bcl11aQ9QYE3 773 aa10.09□□□□□ -0.79
Smc1a-201ENSMUST00000045312 ClspnQ80YR7 1315 aa10.06□□□□□ -0.8
Smc1a-201ENSMUST00000045312 DaxxO35613 739 aa10.05□□□□□ -0.8
Smc1a-201ENSMUST00000045312 TonslQ6NZL6 1363 aa10.05□□□□□ -0.8
Smc1a-201ENSMUST00000045312 NrdcQ8BHG1 1161 aa10.03□□□□□ -0.8
Smc1a-201ENSMUST00000045312 NclP09405 707 aaKnown RBP10.02□□□□□ -0.81
Smc1a-201ENSMUST00000045312 Il27Q8K3I6 234 aa10□□□□□ -0.81
Smc1a-201ENSMUST00000045312 Mapk8ip2Q9ERE9 830 aa10□□□□□ -0.81
Smc1a-201ENSMUST00000045312 Rb1cc1Q9ESK9 1588 aa9.98□□□□□ -0.81
Smc1a-201ENSMUST00000045312 Fam71e1A1L3C1 212 aa9.97□□□□□ -0.81
Smc1a-201ENSMUST00000045312 NeflP08551 543 aa9.96□□□□□ -0.82
Smc1a-201ENSMUST00000045312 NacadQ5SWP3 1504 aa9.94□□□□□ -0.82
Smc1a-201ENSMUST00000045312 Brd4Q9ESU6 1400 aaKnown RBP9.91□□□□□ -0.82
Smc1a-201ENSMUST00000045312 Ap3b1Q9Z1T1 1105 aa9.88□□□□□ -0.83
Smc1a-201ENSMUST00000045312 Fam50aQ9WV03 339 aaKnown RBP9.86□□□□□ -0.83
Smc1a-201ENSMUST00000045312 Ppp4r2Q0VGB7 417 aa9.84□□□□□ -0.83
Smc1a-201ENSMUST00000045312 Calr4Q3TQS0 420 aa9.83□□□□□ -0.84
Smc1a-201ENSMUST00000045312 Dcaf1Q80TR8 1506 aa9.83□□□□□ -0.84
Smc1a-201ENSMUST00000045312 Baz1aO88379 1555 aa9.8□□□□□ -0.84
Smc1a-201ENSMUST00000045312 Anp32bQ9EST5 272 aaKnown RBP9.79□□□□□ -0.84
Smc1a-201ENSMUST00000045312 Npm1Q61937 292 aaKnown RBP9.79□□□□□ -0.84
Smc1a-201ENSMUST00000045312 Ccdc9Q8VC31 543 aaKnown RBP9.76□□□□□ -0.85
Smc1a-201ENSMUST00000045312 Hsp90aa1P07901 733 aaKnown RBP9.76□□□□□ -0.85
Smc1a-201ENSMUST00000045312 Eid3Q3V124 375 aa9.74□□□□□ -0.85
Smc1a-201ENSMUST00000045312 Wdr43Q6ZQL4 677 aaKnown RBP9.74□□□□□ -0.85
Smc1a-201ENSMUST00000045312 Aebp2Q9Z248 504 aaKnown RBP9.74□□□□□ -0.85
Smc1a-201ENSMUST00000045312 SafbD3YXK2 937 aaKnown RBP9.73□□□□□ -0.85
Smc1a-201ENSMUST00000045312 Kdm5dQ62240 1548 aa9.72□□□□□ -0.85
Smc1a-201ENSMUST00000045312 Cep164Q5DU05 1446 aa9.71□□□□□ -0.86
Smc1a-201ENSMUST00000045312 ArxO35085 564 aa9.7□□□□□ -0.86
Smc1a-201ENSMUST00000045312 PrkcshO08795 521 aa9.69□□□□□ -0.86
Smc1a-201ENSMUST00000045312 Plekhg3Q4VAC9 1341 aa9.67□□□□□ -0.86
Smc1a-201ENSMUST00000045312 Hnrnpul2Q00PI9 745 aaKnown RBP9.66□□□□□ -0.86
Smc1a-201ENSMUST00000045312 Ccdc27Q3V036 639 aa9.65□□□□□ -0.86
Smc1a-201ENSMUST00000045312 Irx3P81067 507 aa9.65□□□□□ -0.87
Smc1a-201ENSMUST00000045312 Ythdc1E9Q5K9 736 aaKnown RBP9.63□□□□□ -0.87
Smc1a-201ENSMUST00000045312 Lmod3E9QA62 571 aa9.6□□□□□ -0.87
Smc1a-201ENSMUST00000045312 Chic1Q8CBW7 227 aa9.6□□□□□ -0.87
Smc1a-201ENSMUST00000045312 Ubl4bQ9CQ84 188 aa9.58□□□□□ -0.88
Smc1a-201ENSMUST00000045312 Golga3P55937 1487 aa9.56□□□□□ -0.88
Smc1a-201ENSMUST00000045312 CanxP35564 591 aaKnown RBP9.54□□□□□ -0.88
Smc1a-201ENSMUST00000045312 Mrs2Q5NCE8 434 aa9.54□□□□□ -0.88
Smc1a-201ENSMUST00000045312 Zbtb7cQ8VCZ7 619 aa9.53□□□□□ -0.88
Smc1a-201ENSMUST00000045312 P3h3Q8CG70 732 aa9.52□□□□□ -0.88
Smc1a-201ENSMUST00000045312 Crybg2B7ZCC2 1516 aa9.52□□□□□ -0.89
Smc1a-201ENSMUST00000045312 Clip1Q922J3 1391 aa9.51□□□□□ -0.89
Smc1a-201ENSMUST00000045312 Sycp2Q9CUU3 1500 aa9.51□□□□□ -0.89
Smc1a-201ENSMUST00000045312 Ercc6F8VPZ5 1481 aa9.51□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 171.9 ms